Comamonas odontotermitis: LAD35_20150
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Entry
LAD35_20150 CDS
T07833
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00362
Benzoate degradation
codo00627
Aminobenzoate degradation
codo01100
Metabolic pathways
codo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LAD35_20150
00627 Aminobenzoate degradation
LAD35_20150
00624 Polycyclic aromatic hydrocarbon degradation
LAD35_20150
Enzymes [BR:
codo01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
LAD35_20150
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
UBB19158
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All DBs
Position
complement(4399626..4400513)
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AA seq
295 aa
AA seq
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MSEAQPAKGSANQARITASVYSSHVPAIGAAIDLGKTGEPYWQPLFAGFEPTKQWMRENL
PDVVFLVYNDHATNFDLSVIPTFAIGTAAEFEPADEGYGPRPVPKVMGHPELASHIAQSV
IQQDFDLTIVNELKVDHGLTVPMNLMFGSPAQWPCRVIPLHVNVVQYPVPSGRRCFALGQ
AIRRAIESFDEPLKVQIWGTGGMSHQLQGPRAGLINREWDNRFLDRLIADPADLAEMPHI
DYVREAGSEGIELVMWLIARGAMADVAGGPAPRLAHRFFHVPASNTAVGHLILEN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaggcacagcctgccaaaggctccgccaaccaggcgcgtatcacggcatcggtc
tattcctcgcatgtgcccgccattggagcggccatcgacctgggcaagaccggcgagcct
tactggcagccactgttcgcgggcttcgagcctaccaagcaatggatgcgcgagaacctg
ccggacgtggtgtttctggtctacaacgaccacgccaccaatttcgacctgagcgtcata
ccgacctttgccatcggcacggcggcggagttcgagcccgccgacgaaggctacggcccc
aggccggtgcccaaggtcatgggccaccccgagctggcctcgcacatcgcgcagtcggtg
atccagcaggattttgacttgaccattgtcaatgaactcaaggtggaccatggcctcacc
gtgccgatgaacctgatgttcggcagcccggcccagtggccgtgtcgggtgattcccttg
cacgtcaacgtggtgcagtaccctgtgccatcgggccgccggtgctttgcgctggggcag
gccatccgccgtgccatcgagagctttgacgaaccgctcaaggtgcagatctggggcaca
ggtggcatgagccaccagttgcaagggccgcgcgcggggctgatcaaccgcgagtgggac
aaccgcttcctggaccggctgattgcagacccggcagacctcgccgaaatgccgcacatc
gactacgtgcgcgaagcaggcagcgaaggcatcgagctggtgatgtggctgattgcccgc
ggcgcgatggctgacgtggccggtggccccgcaccccggctggcgcatcgcttctttcac
gtccctgcgtccaacacggccgtgggccacctcattctggagaactga
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