Cohnella candidum: EAV92_05210
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Entry
EAV92_05210 CDS
T05696
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
coh
Cohnella candidum
Pathway
coh03030
DNA replication
coh03430
Mismatch repair
coh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAV92_05210
03430 Mismatch repair
EAV92_05210
03440 Homologous recombination
EAV92_05210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coh03032
]
EAV92_05210
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_05210
Enzymes [BR:
coh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAV92_05210
DNA replication proteins [BR:
coh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAV92_05210
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAV92_05210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
STI1-HOP_DP
Motif
Other DBs
NCBI-ProteinID:
AYQ72020
UniProt:
A0A3G3JUV0
LinkDB
All DBs
Position
1118457..1122785
Genome browser
AA seq
1442 aa
AA seq
DB search
MHHAADGRKRFELLLQQAEIPAQWVSEYFSDGYIQKVEISKTRKEWKFFFVKSTPLPASI
YAGWIEKLKGKLGHLANISVLLGYEENVPTSSIVEEYWPVFVAWMQSEFVSVNGWLAKAR
IEAANDMLTLYMLDEMSLGLAQRKSVDTHAAKFFEERFGRTCRVKLAVGESRQEAYDEFQ
QKIRQENGEAVQQLMASAQVDAPPEGDAPEILQHGYEIKDEPVPIQQILEEEKKITVQGT
VFGLDVKELRSGSTLYQFYVTDYTDSITVKVFGKTKDDNKVLGLLANGKWLKLRGRVEYD
RFLNPPELVMMPSDLKEVKAPPEPKDEAEEKRVEFHVHSTMSAMDAVTPVDVYIKTAAKW
GHKAIAISDHSNVQCFPDAVKAGKKHGMKVLFGVEANVVNDAVPMVLNPREQSLLDATYV
VFDIETTGLSVTANKIIELAGVKMKDGQEIGRFETFINPHEPIPYNIQQLTNINDEMVKD
APELAPKLAEFLDFIGDAVLVAHNARFDIGFIQHACKQNGHPPVPNPALDTLELARYLHP
TMKNHRLNTLADLYKVSLENHHRAIDDTIALGVILNGLLKDAQTRGVTELDQLNHVNGNS
WKTTRPFHCGIYALNAVGKKNLFKLISLSHTEFFHRVACIPRSKLIEMREGLLVISGCEK
GEFFETVLNKSLEEAEEVAAFYDVLEIQPLDFYMHLLDKGLVGSRAELEESLRKICRIGD
KLGKPVIATGNVHYLTPREKLFRDITIHGITGFSPLKDQRKPDAHFRTTNEMLEAFAFLG
KEKAFEVVVRNTNELADRFEPFDMFPKKGGPTDNGLFSPIIDGADEEIRSKCYETASNMY
GDPIPEIVTARLEKELKPIIQYGFSANYLISERLVKKSNADGYLVGSRGSVGSSVVAMFL
GISEVNPLPAHYLCRNPACKYSEFITDGSVPSGFDLKDKPCPNCGEMMRGDGQDIPFETF
LGFKGDKVPDIDLNFSGEYQPHAHNYTKVLFGEKNVFRAGTIGTVAEKTGFGYAKKYQED
HGKSWRGAELNRIAAGVTGVKRSSGQHPGGIVVVPDYIDVEDITPVQFPADDTSSEWKTT
HFDYHAFDENLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSLFNSVDALGVSP
QQIRTNVATYGVPEMGTRFVRQMLEETKPSSFADLLQISGLSHGTGVWLGNAQELIKNGT
CTIKTVIGCRDDIMLFLIYKGGMDASLAFKITESVRKGKGLTQEWIDEMKRCGVPQWYID
SCLRIEYMFPKAHASAYVISAVRTAFFKLYYPIEYYATYYSVRAADFDVELFCQGYDAIL
KMLVEIEAKGFQATTKEKNMISILEMGLEMTARGFKFKPIDLYRSDATRFKVDGDSLIPP
FSAVAGIGENAAKNIAASREDGDYLSIEDFQQRSKASKTIVELLNGMGCFRGLPESNQLM
LF
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatgcggccgatgggcgcaaaagattcgagctgctgctgcagcaagcggaaatt
ccggctcaatgggtctcggaatatttctcggacggctatatccagaaggtggaaatcagc
aaaacgcgcaaggaatggaagttctttttcgtgaaaagcacgccgcttccggcgtccata
tacgcgggttggatcgaaaagcttaaaggcaagctcggtcacctcgcaaacatttccgtg
cttctcggttacgaggagaacgtgccgacttcttcgatcgtggaagagtactggccggtc
ttcgtggcgtggatgcaatcggagttcgtttccgtaaacggatggctggccaaagcgcgg
atcgaagcggcaaacgacatgctgacgttgtacatgctcgacgagatgtcgctcgggttg
gcgcaacgcaaatcggtagatacccatgccgctaaatttttcgaggaacggttcggcagg
acgtgccgcgtcaaactggccgtcggtgagtcgcgccaggaagcgtacgacgaattccag
cagaaaatccggcaggaaaacggagaggccgtccagcagctgatggcgagcgcccaagtc
gatgcgccgccggagggagacgcgccggaaattttgcagcacggctacgagatcaaagac
gagccggtgccgattcagcagatcctcgaggaagagaagaagattacggttcaaggaacc
gtgttcggcctggacgtgaaggagctgcggagcggcagcacgctctatcagttctacgta
accgattatacggattcgatcaccgtgaaggtgttcggcaaaacgaaggacgacaacaag
gtgctcgggctgctcgccaacggcaagtggctgaagctgagaggccgcgtggaatacgac
cgtttcctcaatcctcccgagctcgtcatgatgccgagcgacctgaaagaggtcaaggcg
ccgccggagccgaaggacgaagccgaggagaaacgggtcgaattccatgtgcactcgacg
atgagcgcgatggacgccgtcactcccgtcgatgtttatatcaagaccgcggccaaatgg
ggacacaaggcgatcgcgatcagcgaccacagcaacgtccaatgcttccccgatgcggtg
aaggcgggcaagaagcacggcatgaaggtgctgttcggggtggaagcgaacgtcgtcaac
gatgccgtgccgatggtgctgaatccgcgggaacaaagcctgcttgacgcgacgtacgtc
gttttcgatatcgagacgacggggttgtccgtcaccgccaacaaaatcatcgagcttgcc
ggcgtcaaaatgaaggatgggcaggagatcgggcgtttcgagacgttcatcaatccccat
gagcccattccttataacattcaacagctgaccaacatcaatgacgaaatggtgaaggac
gctccggagctggcgccgaagctggcggagttcctggatttcatcggggacgccgtgctc
gtcgcgcacaacgcgaggttcgatatcggctttatccagcacgcttgcaaacagaatggg
catcctccggtgcccaatcccgcgctcgatacgctggaacttgcccgttatttgcatccg
acgatgaaaaaccaccggctgaatacgctggcggacctctacaaagtgtcgctggagaac
catcaccgcgccatcgacgatacgattgccctcggcgtcattctgaacggccttctcaag
gacgcccagactcgcggcgtgacggaactggaccagctcaaccatgtgaacggcaacagc
tggaaaacgacgaggccgttccactgcggcatttacgcgctgaacgccgtcggcaagaaa
aacctgttcaagctcatatcgctctcgcatacggagtttttccatcgcgttgcctgcatt
ccgagaagcaagttgatcgaaatgagggaagggcttctggtcatttccggttgcgagaaa
ggcgaatttttcgagacggtcttgaacaagtccttggaagaggccgaagaggtggccgca
ttctatgacgtgctcgagatccagcctctggacttctatatgcatttgctggacaagggt
ctcgtcggcagccgagcggagctggaagagtcgctccgcaaaatatgccgcattggcgac
aagctgggcaagccggtcatcgcgacgggcaacgtccactatttgaccccgcgcgagaag
ctgttccgcgatattacgatccacggaattaccggcttcagcccgctgaaggaccaacga
aaaccggacgcgcatttccgtacgacgaacgaaatgctggaggcgttcgcattcctgggc
aaagaaaaggcgttcgaagtcgtcgtccgaaacacgaacgaattagccgaccgcttcgag
ccgttcgatatgttcccgaagaagggcggcccgaccgacaacggcctattctcgccgatc
atcgacggcgcggacgaggaaatccgttcgaaatgctatgaaacggcgagcaacatgtac
ggggatccgattccggagatcgtgaccgcccgactggagaaagagctgaagccgatcatc
caatacggcttctcggcgaactatctcatttcggaacggctcgtgaaaaagtcgaatgcg
gacggttacctcgtcggttcccggggttccgtcggttcctccgtcgtcgcgatgttcctc
ggaatatccgaagttaacccgcttcccgcgcattacctgtgccgcaatccggcctgcaaa
tacagcgaattcattaccgacgggagcgtgccttccggcttcgacctgaaggacaagccc
tgcccgaattgcggggaaatgatgaggggcgacggccaggacattccgttcgagacgttc
ctcgggtttaagggagataaggttcccgatatcgatttgaacttctcgggcgaataccag
ccgcacgcgcataactacacgaaggtgctgttcggggagaaaaacgtgttccgggccggc
acgatcggcaccgtcgcggagaaaaccgggttcggttacgcgaagaaataccaagaggac
cacggcaaatcgtggcgcggggcggagctgaaccggatcgcggccggcgtcaccggcgtc
aagcgctcgtccggccagcatcccggcggtatcgtcgtcgtgccggactacatcgatgtg
gaagacatcacgccggtccagtttccggcggacgacacgagctccgagtggaagacgacg
cacttcgattaccacgccttcgacgagaacctgctcaagctcgatatcctggggcacgat
gatccgacgatgatgcggatgctgcaggatttgacgggcgtcgacccgacgacgatcccg
atgaacgatccgaaggtcatgagcctgttcaactcggtcgacgcgctcggcgtctcgccg
cagcaaatccgcacgaacgtcgccacctacggggtgccggagatgggcacgcgtttcgtc
cggcagatgctcgaagagacgaagccgtcctcgttcgccgacctgctgcagatttcgggc
ttgtcccacggcacgggcgtatggctcggcaacgcgcaggagctgatcaagaacggcacc
tgcacgatcaagaccgttatcggctgccgtgacgacatcatgctgttcctcatttataag
ggaggaatggacgcgtcgctggcgttcaagatcaccgaaagcgtgcggaaaggcaaaggg
cttacgcaggagtggatcgacgaaatgaagcgctgcggggtgccgcagtggtacatcgat
tcctgcctgcgcatcgagtacatgttcccgaaggcgcacgcgtcggcttacgtcatctcg
gccgttcggacggcatttttcaaattgtattatcccatcgaatactatgcgacgtattat
tcggttcgcgcggcggatttcgacgtcgagctgttctgtcaaggttatgacgcgatcctg
aagatgctggtcgagatcgaggcgaaaggcttccaggcgacgacgaaagagaagaacatg
atctccattctcgaaatggggctggagatgaccgctcggggcttcaagttcaagccgatc
gacttgtaccgttccgacgcgacgcgcttcaaagtcgacggggattcgcttatcccgccg
ttttccgccgtggcggggatcggcgagaacgcggccaagaacatcgcggcttcccgcgaa
gacggcgattacctctctatcgaggacttccagcaacgctctaaggcgagcaagacgatc
gtcgagctgctgaacggcatgggatgcttccgcggactgcctgagagcaaccagttgatg
ctgttctga
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integrated database retrieval system