KEGG   Cohnella candidum: EAV92_05210
Entry
EAV92_05210       CDS       T05696                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
coh  Cohnella candidum
Pathway
coh03030  DNA replication
coh03430  Mismatch repair
coh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:coh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EAV92_05210
   03430 Mismatch repair
    EAV92_05210
   03440 Homologous recombination
    EAV92_05210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:coh03032]
    EAV92_05210
   03400 DNA repair and recombination proteins [BR:coh03400]
    EAV92_05210
Enzymes [BR:coh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EAV92_05210
DNA replication proteins [BR:coh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EAV92_05210
DNA repair and recombination proteins [BR:coh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EAV92_05210
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NI HHH_6 DNA_pol3_a_NII tRNA_anti-codon RNase_H_2 DNA_pol_A_exo1 HHH_3 STI1-HOP_DP
Other DBs
NCBI-ProteinID: AYQ72020
UniProt: A0A3G3JUV0
LinkDB
Position
1118457..1122785
AA seq 1442 aa
MHHAADGRKRFELLLQQAEIPAQWVSEYFSDGYIQKVEISKTRKEWKFFFVKSTPLPASI
YAGWIEKLKGKLGHLANISVLLGYEENVPTSSIVEEYWPVFVAWMQSEFVSVNGWLAKAR
IEAANDMLTLYMLDEMSLGLAQRKSVDTHAAKFFEERFGRTCRVKLAVGESRQEAYDEFQ
QKIRQENGEAVQQLMASAQVDAPPEGDAPEILQHGYEIKDEPVPIQQILEEEKKITVQGT
VFGLDVKELRSGSTLYQFYVTDYTDSITVKVFGKTKDDNKVLGLLANGKWLKLRGRVEYD
RFLNPPELVMMPSDLKEVKAPPEPKDEAEEKRVEFHVHSTMSAMDAVTPVDVYIKTAAKW
GHKAIAISDHSNVQCFPDAVKAGKKHGMKVLFGVEANVVNDAVPMVLNPREQSLLDATYV
VFDIETTGLSVTANKIIELAGVKMKDGQEIGRFETFINPHEPIPYNIQQLTNINDEMVKD
APELAPKLAEFLDFIGDAVLVAHNARFDIGFIQHACKQNGHPPVPNPALDTLELARYLHP
TMKNHRLNTLADLYKVSLENHHRAIDDTIALGVILNGLLKDAQTRGVTELDQLNHVNGNS
WKTTRPFHCGIYALNAVGKKNLFKLISLSHTEFFHRVACIPRSKLIEMREGLLVISGCEK
GEFFETVLNKSLEEAEEVAAFYDVLEIQPLDFYMHLLDKGLVGSRAELEESLRKICRIGD
KLGKPVIATGNVHYLTPREKLFRDITIHGITGFSPLKDQRKPDAHFRTTNEMLEAFAFLG
KEKAFEVVVRNTNELADRFEPFDMFPKKGGPTDNGLFSPIIDGADEEIRSKCYETASNMY
GDPIPEIVTARLEKELKPIIQYGFSANYLISERLVKKSNADGYLVGSRGSVGSSVVAMFL
GISEVNPLPAHYLCRNPACKYSEFITDGSVPSGFDLKDKPCPNCGEMMRGDGQDIPFETF
LGFKGDKVPDIDLNFSGEYQPHAHNYTKVLFGEKNVFRAGTIGTVAEKTGFGYAKKYQED
HGKSWRGAELNRIAAGVTGVKRSSGQHPGGIVVVPDYIDVEDITPVQFPADDTSSEWKTT
HFDYHAFDENLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSLFNSVDALGVSP
QQIRTNVATYGVPEMGTRFVRQMLEETKPSSFADLLQISGLSHGTGVWLGNAQELIKNGT
CTIKTVIGCRDDIMLFLIYKGGMDASLAFKITESVRKGKGLTQEWIDEMKRCGVPQWYID
SCLRIEYMFPKAHASAYVISAVRTAFFKLYYPIEYYATYYSVRAADFDVELFCQGYDAIL
KMLVEIEAKGFQATTKEKNMISILEMGLEMTARGFKFKPIDLYRSDATRFKVDGDSLIPP
FSAVAGIGENAAKNIAASREDGDYLSIEDFQQRSKASKTIVELLNGMGCFRGLPESNQLM
LF
NT seq 4329 nt   +upstreamnt  +downstreamnt
atgcatcatgcggccgatgggcgcaaaagattcgagctgctgctgcagcaagcggaaatt
ccggctcaatgggtctcggaatatttctcggacggctatatccagaaggtggaaatcagc
aaaacgcgcaaggaatggaagttctttttcgtgaaaagcacgccgcttccggcgtccata
tacgcgggttggatcgaaaagcttaaaggcaagctcggtcacctcgcaaacatttccgtg
cttctcggttacgaggagaacgtgccgacttcttcgatcgtggaagagtactggccggtc
ttcgtggcgtggatgcaatcggagttcgtttccgtaaacggatggctggccaaagcgcgg
atcgaagcggcaaacgacatgctgacgttgtacatgctcgacgagatgtcgctcgggttg
gcgcaacgcaaatcggtagatacccatgccgctaaatttttcgaggaacggttcggcagg
acgtgccgcgtcaaactggccgtcggtgagtcgcgccaggaagcgtacgacgaattccag
cagaaaatccggcaggaaaacggagaggccgtccagcagctgatggcgagcgcccaagtc
gatgcgccgccggagggagacgcgccggaaattttgcagcacggctacgagatcaaagac
gagccggtgccgattcagcagatcctcgaggaagagaagaagattacggttcaaggaacc
gtgttcggcctggacgtgaaggagctgcggagcggcagcacgctctatcagttctacgta
accgattatacggattcgatcaccgtgaaggtgttcggcaaaacgaaggacgacaacaag
gtgctcgggctgctcgccaacggcaagtggctgaagctgagaggccgcgtggaatacgac
cgtttcctcaatcctcccgagctcgtcatgatgccgagcgacctgaaagaggtcaaggcg
ccgccggagccgaaggacgaagccgaggagaaacgggtcgaattccatgtgcactcgacg
atgagcgcgatggacgccgtcactcccgtcgatgtttatatcaagaccgcggccaaatgg
ggacacaaggcgatcgcgatcagcgaccacagcaacgtccaatgcttccccgatgcggtg
aaggcgggcaagaagcacggcatgaaggtgctgttcggggtggaagcgaacgtcgtcaac
gatgccgtgccgatggtgctgaatccgcgggaacaaagcctgcttgacgcgacgtacgtc
gttttcgatatcgagacgacggggttgtccgtcaccgccaacaaaatcatcgagcttgcc
ggcgtcaaaatgaaggatgggcaggagatcgggcgtttcgagacgttcatcaatccccat
gagcccattccttataacattcaacagctgaccaacatcaatgacgaaatggtgaaggac
gctccggagctggcgccgaagctggcggagttcctggatttcatcggggacgccgtgctc
gtcgcgcacaacgcgaggttcgatatcggctttatccagcacgcttgcaaacagaatggg
catcctccggtgcccaatcccgcgctcgatacgctggaacttgcccgttatttgcatccg
acgatgaaaaaccaccggctgaatacgctggcggacctctacaaagtgtcgctggagaac
catcaccgcgccatcgacgatacgattgccctcggcgtcattctgaacggccttctcaag
gacgcccagactcgcggcgtgacggaactggaccagctcaaccatgtgaacggcaacagc
tggaaaacgacgaggccgttccactgcggcatttacgcgctgaacgccgtcggcaagaaa
aacctgttcaagctcatatcgctctcgcatacggagtttttccatcgcgttgcctgcatt
ccgagaagcaagttgatcgaaatgagggaagggcttctggtcatttccggttgcgagaaa
ggcgaatttttcgagacggtcttgaacaagtccttggaagaggccgaagaggtggccgca
ttctatgacgtgctcgagatccagcctctggacttctatatgcatttgctggacaagggt
ctcgtcggcagccgagcggagctggaagagtcgctccgcaaaatatgccgcattggcgac
aagctgggcaagccggtcatcgcgacgggcaacgtccactatttgaccccgcgcgagaag
ctgttccgcgatattacgatccacggaattaccggcttcagcccgctgaaggaccaacga
aaaccggacgcgcatttccgtacgacgaacgaaatgctggaggcgttcgcattcctgggc
aaagaaaaggcgttcgaagtcgtcgtccgaaacacgaacgaattagccgaccgcttcgag
ccgttcgatatgttcccgaagaagggcggcccgaccgacaacggcctattctcgccgatc
atcgacggcgcggacgaggaaatccgttcgaaatgctatgaaacggcgagcaacatgtac
ggggatccgattccggagatcgtgaccgcccgactggagaaagagctgaagccgatcatc
caatacggcttctcggcgaactatctcatttcggaacggctcgtgaaaaagtcgaatgcg
gacggttacctcgtcggttcccggggttccgtcggttcctccgtcgtcgcgatgttcctc
ggaatatccgaagttaacccgcttcccgcgcattacctgtgccgcaatccggcctgcaaa
tacagcgaattcattaccgacgggagcgtgccttccggcttcgacctgaaggacaagccc
tgcccgaattgcggggaaatgatgaggggcgacggccaggacattccgttcgagacgttc
ctcgggtttaagggagataaggttcccgatatcgatttgaacttctcgggcgaataccag
ccgcacgcgcataactacacgaaggtgctgttcggggagaaaaacgtgttccgggccggc
acgatcggcaccgtcgcggagaaaaccgggttcggttacgcgaagaaataccaagaggac
cacggcaaatcgtggcgcggggcggagctgaaccggatcgcggccggcgtcaccggcgtc
aagcgctcgtccggccagcatcccggcggtatcgtcgtcgtgccggactacatcgatgtg
gaagacatcacgccggtccagtttccggcggacgacacgagctccgagtggaagacgacg
cacttcgattaccacgccttcgacgagaacctgctcaagctcgatatcctggggcacgat
gatccgacgatgatgcggatgctgcaggatttgacgggcgtcgacccgacgacgatcccg
atgaacgatccgaaggtcatgagcctgttcaactcggtcgacgcgctcggcgtctcgccg
cagcaaatccgcacgaacgtcgccacctacggggtgccggagatgggcacgcgtttcgtc
cggcagatgctcgaagagacgaagccgtcctcgttcgccgacctgctgcagatttcgggc
ttgtcccacggcacgggcgtatggctcggcaacgcgcaggagctgatcaagaacggcacc
tgcacgatcaagaccgttatcggctgccgtgacgacatcatgctgttcctcatttataag
ggaggaatggacgcgtcgctggcgttcaagatcaccgaaagcgtgcggaaaggcaaaggg
cttacgcaggagtggatcgacgaaatgaagcgctgcggggtgccgcagtggtacatcgat
tcctgcctgcgcatcgagtacatgttcccgaaggcgcacgcgtcggcttacgtcatctcg
gccgttcggacggcatttttcaaattgtattatcccatcgaatactatgcgacgtattat
tcggttcgcgcggcggatttcgacgtcgagctgttctgtcaaggttatgacgcgatcctg
aagatgctggtcgagatcgaggcgaaaggcttccaggcgacgacgaaagagaagaacatg
atctccattctcgaaatggggctggagatgaccgctcggggcttcaagttcaagccgatc
gacttgtaccgttccgacgcgacgcgcttcaaagtcgacggggattcgcttatcccgccg
ttttccgccgtggcggggatcggcgagaacgcggccaagaacatcgcggcttcccgcgaa
gacggcgattacctctctatcgaggacttccagcaacgctctaaggcgagcaagacgatc
gtcgagctgctgaacggcatgggatgcttccgcggactgcctgagagcaaccagttgatg
ctgttctga

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