Colwellia sp. Arc7-D: DBO93_15670
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Entry
DBO93_15670 CDS
T05422
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00730
Thiamine metabolism
cola01100
Metabolic pathways
cola01240
Biosynthesis of cofactors
cola04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DBO93_15670
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DBO93_15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cola03016
]
DBO93_15670
Enzymes [BR:
cola01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DBO93_15670
Transfer RNA biogenesis [BR:
cola03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DBO93_15670
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
AWB58855
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Position
complement(3636135..3637589)
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AA seq
484 aa
AA seq
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MKFIVKLQAEITIKSRPVRKRFTKILESSVKNVLRRVDEQVTTRMNWDNIEVNTANNSPE
NRLKLIDTLKSIPGIPMFLEVQQTDFTDLHDIYEKTAAVHAQNIENKTFCVRVKRTGKHE
FNSIKVEQYVGGGLNQQVESARVKLSKPDFTVHLEIKNENLFIVTERHKGMGGFPIATQE
DVLSLMSGGFDSGVASYQMIKKGARTHYCFFNLGGAAHEVGVKQVSYYLWNKFGASHRVK
FFAVDFEPVVEEILENIDNGLMGVVLKRMMMRAAEKIANKMGIQALITGEAVGQVSSQTL
TNLNVIDRVTETLILRPLIAYDKQDIIDIARKIGTEDFAKTIPEYCGVISKKPTVKAVLA
KVEAEEANFDFSILDKVIEETRIFDIRDIGKESEEEIHAVDTLDNIPANSIVLDIRSPEE
EDDNPLALDGVEIMHMPFYKLSTQFGDLDKSKEYLLYCDQGVMSKLQALYLLGAGFTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaaattacaggctgaaattaccatcaaaagccgtccggtgcgaaag
cgttttactaagattttagagtcgagtgtaaaaaacgttttacgtcgtgttgatgagcaa
gttacaacgcgaatgaactgggataacattgaagttaacaccgctaataatagtccagaa
aatcgattaaaattaatcgataccctaaaatcgatccctggcattccaatgtttcttgaa
gttcagcagacagactttactgatttgcatgatatttatgaaaaaactgcagctgtacat
gctcaaaacattgaaaataaaaccttttgtgttcgtgtaaaacgcaccggtaagcacgag
tttaactctataaaagttgagcaatatgttggtggtggtttaaatcaacaggttgaatcg
gcacgggtaaaattgtcgaaacctgactttactgtgcaccttgaaattaaaaatgaaaat
ctatttattgttaccgaacgccacaaaggtatgggcggctttccaattgctacgcaagaa
gatgtattgtcacttatgtcgggtggttttgactcaggtgttgctagttatcaaatgata
aagaaaggcgcacgtacgcattattgtttctttaatttaggtggcgcggcgcacgaagtt
ggtgttaaacaggttagttactatttatggaacaaatttggtgcatcacatcgtgttaaa
tttttcgccgttgattttgaacctgttgtcgaagaaatattggaaaatattgataatggc
ttaatgggtgttgtgcttaaacgcatgatgatgcgagccgccgagaaaatagccaataaa
atgggcattcaagcgcttattacgggagaagcggtaggacaagtatcgagtcaaacatta
acgaacttgaatgtaattgatcgcgtaaccgaaacgttaattcttcgaccattaattgct
tacgataaacaagatattattgatattgcacgcaaaattggtacggaagattttgctaaa
accattcctgaatattgtggtgttatttctaaaaagccaacggtcaaggcggtattagct
aaagttgaagctgaagaagctaattttgatttctcaatccttgataaagttattgaagaa
acacgtattttcgacattcgcgatatcggcaaagaaagcgaagaagaaattcatgccgtt
gacaccttagataatattcccgctaactcaattgtgcttgatattagaagccctgaagaa
gaagatgacaacccattagcgttagatggtgtagaaataatgcacatgccgttttacaag
ctgtcgactcaatttggtgacttagataaatctaaagaatatttattgtattgcgaccaa
ggtgttatgagtaaattacaggcactttatttattaggtgcaggctttacaaatgtgaaa
gtctatcgcccataa
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