Collinsella sp. zg1085: KPC83_03805
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Entry
KPC83_03805 CDS
T09607
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
coll
Collinsella sp. zg1085
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coll03009
]
KPC83_03805 (rimO)
Enzymes [BR:
coll01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KPC83_03805 (rimO)
Ribosome biogenesis [BR:
coll03009
]
Prokaryotic type
ribosomal protein modification factors
KPC83_03805 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QWT16991
UniProt:
A0A975SCG1
LinkDB
All DBs
Position
911709..913058
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AA seq
449 aa
AA seq
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MSLGSLHYITLGCAKNEVDTDRMRSLLSAAGYTETDSPQEAAAVLINTCSFLAAATTESL
EATFEVAREADGLTRRPQIIMCGCVPSRYGQELNAELPEVAAFVNTREEDAIVSVVDSVL
GIKRSEPPHLPKVKRTVESAVAYLKISDGCDRFCSFCAIPYIRGAYQSRSAAQILAEAQE
LVAGGVRELVLIGQDTGVWGSDFDERQGATGPKNLAQLLVYLAEALREQQVWIRVLYLQP
EGMTEELVAAIRDTPEVLPYIDIPVQHVSKHVLADMNRTGSEAELRELFRWLRSEIPHMV
IRTTYLAGFPGETDKDAEDMLHFMTDLSFDYTSVFAYSREEGTSAYDMDNQVADDVILAR
TQAGLDVAEELGFASTAAHVGETALVLIDGIDEGDEGPELIGHAWFQAPDSDGAVHLPLG
EASVGDIVMVKFDDSVCYELMGHVVRGTE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttggttcacttcactatataacccttggttgtgcaaaaaatgaggtcgataca
gaccgcatgcgctcgctgttgagcgccgcaggatacactgagacagattccccgcaagag
gcggcggcagtactcattaacacctgttcgtttttggcagcagccaccaccgaaagtctt
gaagcaacctttgaagttgcgcgtgaagcagatggtctcacacgccgcccgcaaattatc
atgtgcggctgtgttccttcgcgctatggtcaagaactaaacgcagagcttcccgaagtt
gctgcctttgtgaacacccgtgaagaagacgctattgtgtcggtggttgattcggtactt
ggtatcaagcgcagtgaacctcctcatctacctaaggttaagcgtacggttgaaagcgca
gtagcctatctcaaaatctctgatggatgtgatcgtttttgcagcttctgcgcaattcct
tatattcgcggagcctaccaatcacgctcagctgcacaaattcttgctgaggcacaagag
ctggttgcaggtggtgttcgtgagctcgttctcattggtcaagataccggtgtttggggc
agtgattttgatgaacgccaaggcgcaacaggtcccaaaaatctcgcccagttgcttgtt
tatttggcagaggctttgcgtgagcagcaggtttggatacgcgttttatatctgcagcca
gaaggcatgacagaagagcttgttgcagcaattcgcgatactccagaggtgttgccatac
atcgatattccggtacagcatgtaagcaagcatgtgctggcagacatgaaccgaacaggg
tcagaggcggagcttcgtgaattgttccggtggctacgttcagaaattcctcatatggtt
attcgcaccacgtatttagctggatttcctggtgagaccgataaagacgctgaggatatg
ctgcactttatgaccgatttatcctttgactacacgagcgtttttgcgtattcgcgcgaa
gaaggtaccagtgcctatgatatggataatcaggttgcggatgatgttatcttagcacgt
acccaagcgggacttgatgtagcagaagagctcggatttgcatcaactgctgcccatgtg
ggtgagactgcactggtgttgattgatggcatcgatgagggcgatgaggggccagagctt
attggacatgcatggtttcaagctcctgatagcgatggtgctgtacatcttccacttggc
gaggcttcggtgggcgatatagtaatggtcaagtttgacgacagtgtttgctatgagctt
atgggtcatgtagtgagaggtactgagtaa
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