Colwellia sp. PAMC 21821: A3Q33_05130
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Entry
A3Q33_05130 CDS
T04816
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw00730
Thiamine metabolism
colw01100
Metabolic pathways
colw01240
Biosynthesis of cofactors
colw04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A3Q33_05130
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
A3Q33_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
colw03016
]
A3Q33_05130
Enzymes [BR:
colw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
A3Q33_05130
Transfer RNA biogenesis [BR:
colw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
A3Q33_05130
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
ARD43741
LinkDB
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Position
complement(1225919..1227373)
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AA seq
484 aa
AA seq
DB search
MKFIVKLQAEITIKSRPVRKRFTKILESSVKNVLRRVDDQVTTRMNWDNIEVNTANNTPE
NRLKLIETLKSIPGIPMFLEVQQTDFTDLHDIYEKTLAVHAKNIENKTFCVRVKRTGKHD
FNSIKVEQYVGGGLNQQVESARVKLTKPDVTVYLEIKNENLFIVTERHKGMGGFPIATQE
DVLSLMSGGFDSGVASYQMIKKGARTHYCFFNLGGDAHEVGVKQVSYYLWDKFGASHRVK
FFAVDFEPVVAEILENIENGLMGVVLKRMMMRAAEKIAAKMGIQALVTGEAVGQVSSQTL
TNLNVIDRVTETLILRPLVAYDKQDIIDIARQIGTEDFAKTIPEYCGVISKKPTVKAVLS
KVEAEEANFDFAVLDKVIAETRIFDIRDIGKESEAEIHAVDTLDNIPANAVVLDIRSPEE
EDDNPLDLEGVEVVHLPFYKLTTQFGDLDKSKDYLLYCDQGVMSKLQALYLLGAGFTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaagttacaggctgaaattacgattaaaagccgtccggtgcgtaag
cgttttactaagattttagaatcgagtgtgaaaaatgttttacgacgtgttgatgatcaa
gttacaacgcgcatgaactgggacaatattgaagtaaatacagccaacaatacacccgaa
aaccgtttgaaattgatcgaaacgttaaagtcaattccaggtattccgatgtttcttgaa
gtgcaacaaacagattttaccgatttgcacgatatttatgaaaaaaccttagctgtgcat
gctaaaaacattgagaataaaaccttttgtgtgcgagtaaaacgaaccggtaagcacgat
tttaattctataaaagtggaacaatatgttggaggaggcttaaatcagcaagttgagtct
gcccgagttaaattgaccaaacctgatgttacggtttatctagaaattaaaaatgaaaat
ttatttatagtgactgaacgtcataaaggtatgggcggcttccctattgccacacaagaa
gatgttttatcgcttatgtctggtggttttgattctggtgttgctagttaccaaatgata
aaaaaaggtgcacgtacccattattgcttttttaacttgggtggtgacgcgcacgaagtt
ggtgttaagcaggttagctattatttatgggataagtttggtgcttctcaccgagtgaag
ttttttgctgtagattttgaacctgtcgtcgctgaaattttagaaaacatagaaaatggc
ctgatgggcgttgtgcttaaacgcatgatgatgcgagcagctgaaaaaatagctgcaaaa
atgggtattcaagcgctagtcactggagaagccgtagggcaagtatctagtcaaacatta
actaacttgaatgtgattgaccgtgttaccgaaaccttgattctacgaccattagttgca
tacgacaaacaagatattattgatatagcacgccaaattgggactgaagattttgctaaa
actatcccagaatactgtggtgttatttctaaaaaacccacagtaaaagcggtattgtca
aaagttgaggcagaagaagctaattttgattttgcagtgctcgataaagtcattgctgag
actcgtatctttgatattcgtgacattggtaaagaaagcgaagccgagattcatgctgtt
gacaccttggataatattcctgccaatgcggtagtactcgacattcgtagccctgaagaa
gaagatgataatccattagacctagaaggggtagaagtggtgcacttacctttttacaag
ctaacgactcagtttggagacttagataagtctaaagattacttactttattgcgaccaa
ggtgtaatgagtaaactacaggcgctgtatttattaggcgcaggctttaccaatgttaaa
gtatatcgcccttaa
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