Colwellia sp. PAMC 21821: A3Q33_11005
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Entry
A3Q33_11005 CDS
T04816
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw00071
Fatty acid degradation
colw00280
Valine, leucine and isoleucine degradation
colw00310
Lysine degradation
colw00362
Benzoate degradation
colw00380
Tryptophan metabolism
colw00410
beta-Alanine metabolism
colw00640
Propanoate metabolism
colw00650
Butanoate metabolism
colw00907
Pinene, camphor and geraniol degradation
colw00930
Caprolactam degradation
colw01100
Metabolic pathways
colw01110
Biosynthesis of secondary metabolites
colw01120
Microbial metabolism in diverse environments
colw01200
Carbon metabolism
colw01212
Fatty acid metabolism
Module
colw_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A3Q33_11005 (fadB)
00650 Butanoate metabolism
A3Q33_11005 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A3Q33_11005 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A3Q33_11005 (fadB)
00310 Lysine degradation
A3Q33_11005 (fadB)
00380 Tryptophan metabolism
A3Q33_11005 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A3Q33_11005 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A3Q33_11005 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A3Q33_11005 (fadB)
00930 Caprolactam degradation
A3Q33_11005 (fadB)
Enzymes [BR:
colw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A3Q33_11005 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A3Q33_11005 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A3Q33_11005 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A3Q33_11005 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ARD44789
LinkDB
All DBs
Position
2579835..2582009
Genome browser
AA seq
724 aa
AA seq
DB search
MLFQGKSLSAKLLDDGIVEFKFDAQGSVNKFDQATFKEYIAVVDAINNCSEAKGVLVTSG
KSSFIVGADITEFLEIFKKPEDELLPWIKQGSDVFDSFEDINLPTVVAINGFALGGGCEM
SLACDYRIGDTSCSIGLPEVNLGLIPGFGGTVRLPRVIGADNAIEWMSTGRTFKAEQAMA
VGVLDAVVAPEHLREAAIKMLNQAIAGKLDWRAKRQPKLEALKLSPTETIMTFNTCKGMI
AAKAGKHYPAPMVMVKTIEAAASLGREGAMALENAGFAKLAKTDVATAQIGLFMADQVVK
GKAKKAGKQATKAVNKAAVLGAGIMGGGIAYQSAYKGTPIIMKDINDQALDLGLTTAAGI
LTKQVERGRMSVKKMAGVLNSITPSLSYDSVKDVDIVVEAVVENPKVKAMVLAEVESHVS
EDTIVTSNTSTISIDLLAQGLKRKDKFCGMHFFNPVNKMPLVEVIRGKETSDETVAAVVA
YAAKMGKSPIVVNDCPGFYINRVLFPYFAGFSQLVLEGADFVAVDKVMEKQFGWPMGPAY
LLDVVGIDTADHCTGVMSAGFPTRMSKIDNDPVSALYNKDRLGQKNGKGFYDYGKDKRGR
PTKVAAQVAYDLFAGVSTGAEKKDFSSDETIARLMIPMVNEVVRCLEEGVVDTAAEADMG
LIYGLGFPPFRGGPIRYLETLGLDNFIAMADKYAHLGEIYQVTDGLREMAKSGQSYFTTD
VKTA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcaaggcaaaagcctttctgccaagttgttagatgatggcattgtcgaattt
aaattcgatgcacaaggctcagttaacaaatttgatcaggcaacgtttaaagaatatatc
gcagttgttgatgcgattaataattgcagtgaagcaaaaggggttttagttacctctggt
aagtcttctttcatcgttggtgctgatatcaccgagtttttagaaatatttaaaaaacct
gaagatgagttactgccttggatcaaacaaggttctgatgtttttgactcatttgaagat
ataaaccttccgaccgttgtcgctattaatggttttgccttaggtggcggttgtgaaatg
agtttggcttgtgactaccgtattggtgatacgtcgtgttcaatcggtttaccagaagta
aacttgggtctaatccctggttttggtggaactgtgcgtttacctcgtgttattggtgct
gataatgccattgagtggatgtcgacaggtcgaacgtttaaagccgaacaagcgatggcc
gtaggtgtacttgatgccgtagttgctccagaacatttgcgcgaagccgcaatcaagatg
ctaaatcaagcgattgcaggcaaactagattggcgcgctaaacgccaacctaaattagaa
gcattaaagctttcgccaacagaaacaattatgacctttaatacctgtaaaggcatgata
gcagcgaaagccggtaagcattacccagcaccaatggtgatggttaaaacgattgaagca
gccgccagtttaggccgtgaaggcgcaatggcattggaaaatgctggttttgcaaaatta
gcgaaaaccgatgtagctactgctcaaattggcctgtttatggctgaccaagttgttaaa
ggtaaagctaaaaaagcgggtaaacaagccactaaagctgtgaataaagcggcagtattg
ggtgcaggcattatgggcggtggtattgcttaccagtcagcttataaaggcacgccaatt
atcatgaaagatattaacgaccaagcgcttgatttaggtctaacaacggctgctggcatt
ttaactaagcaagttgaacgcggccgcatgagcgttaagaaaatggctggcgtactcaat
agcatcacaccatcattaagttatgacagtgttaaagatgttgatattgtcgttgaagcg
gtagttgaaaatccaaaagttaaagcgatggtactggctgaagttgaaagtcatgtgagt
gaagatactattgtgacttctaacacgtcgactatttcaattgatttattagcacaaggt
cttaaacgcaaagacaagttttgtggcatgcatttcttcaacccggtaaacaaaatgcca
ttggttgaagttattcgcggtaaagaaacttctgatgaaactgttgctgctgttgtggct
tacgccgctaaaatgggtaaatcaccgattgttgttaacgattgtccaggtttttacatt
aaccgtgttttattcccatattttgcaggctttagccaattagtacttgaaggtgctgat
ttcgtcgcagttgataaagtgatggagaaacaatttggttggccaatgggcccggcatat
ttacttgatgttgtgggtattgatactgctgatcattgtacaggcgttatgtctgctggt
ttcccaacccgtatgtctaaaattgataatgacccagtaagtgctttatataataaagat
cgtttgggtcagaaaaatggtaaaggcttctacgattacggtaaagataagcgtggtcgt
ccaacaaaagtagcagctcaagtagcttatgacctgtttgcaggtgtaagtaccggcgct
gagaaaaaagactttagctcggatgaaactatcgcacgtttgatgatccctatggtgaat
gaagttgtacgctgtttagaagaaggtgtagtagatactgcagctgaagctgacatgggc
ttgatatacggtttaggctttcctccatttagaggcggtccaattcgttacctagaaact
cttggattagataactttattgcgatggctgataaatacgcgcacttaggcgaaatttat
caagttactgatggactacgcgaaatggcgaaatctggtcagtcatattttacaaccgat
gttaaaacagcttaa
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