Colwellia sp. PAMC 21821: A3Q33_13820
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Entry
A3Q33_13820 CDS
T04816
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw00250
Alanine, aspartate and glutamate metabolism
colw00310
Lysine degradation
colw00350
Tyrosine metabolism
colw00650
Butanoate metabolism
colw00760
Nicotinate and nicotinamide metabolism
colw01100
Metabolic pathways
colw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A3Q33_13820 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3Q33_13820 (gabD)
00310 Lysine degradation
A3Q33_13820 (gabD)
00350 Tyrosine metabolism
A3Q33_13820 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A3Q33_13820 (gabD)
Enzymes [BR:
colw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A3Q33_13820 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A3Q33_13820 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A3Q33_13820 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ARD45276
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Position
3259014..3260486
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AA seq
490 aa
AA seq
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MQNHSDLGLQDSQLVKNFSYINGSWHSSESQISVTNPVDGSEVAKISNAGVVETELAVNA
AKSALKMWSSKSANERAGLMRNWFQLMMQHQDDLGRILTLEQGKPLAEAKGEIAYGAAFI
EWFAEEGKRVYGDTIPGPSSDKRILVIKQPVGVVASITPWNFPNAMIARKAAAALAAGCT
FVVRPATQTPLSALAMAELAERAGIPAGVFNVVVGDDASGMGKVLTQHPDVAKFTFTGST
PVGKTLLKQCATTVKKVSMELGGNAPFIVFADADIDAAVQGALASKYRNAGQTCVCTNRI
FVQSAVLEQFTEKFTAAVKSLAIGNGLDEGVNIGPMISNKAVNDVAKLVEDSIAAGAKVI
LGGKQDSAGENFYQPTILSNVTNDMPIAQNEIFGPVSPIISFDTEAEVIAMANDTEFGLA
AYFYSRDIGTIWRVGEGLEYGMIGINEGIISNAAAPFGGMKQSGSGREGSKYGLDDYLEI
KYLCMGGLDK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcactcagacctaggtttacaagatagtcaattagttaaaaacttttcatat
atcaacggtagctggcatagcagcgaatcacaaatatccgtgactaatccggtcgacggc
agtgaagttgcaaaaataagtaacgccggtgtagttgaaacagaattagcggtaaatgcg
gctaaaagcgcattaaaaatgtggtcttcaaagtcagccaatgaacgtgcaggcttaatg
cgtaattggtttcaattaatgatgcaacatcaagatgaccttgggcgcattttaacgcta
gagcaaggtaagccattagctgaagctaaaggtgaaattgcttatggtgcggcatttatt
gaatggtttgctgaagaaggcaagcgtgtttacggcgacactattcctggaccatcaagt
gataaacgcattttggtcattaaacagccggtaggtgttgttgcttcgatcactccatgg
aattttcctaatgctatgatcgcaagaaaagccgcggctgccttagcggcgggttgtacg
tttgtagtgcgcccggcaacacaaacgccactttctgcattggctatggctgagcttgct
gaacgtgcgggtattcctgctggcgtatttaacgtagttgtaggcgacgatgctagtggt
atgggtaaagtattaactcaacaccctgacgttgctaaatttaccttcacgggctctaca
ccggtaggtaaaacgttacttaaacaatgtgcaaccacggttaaaaaagtatcaatggaa
ttgggcggtaacgcaccttttattgtttttgctgatgctgacattgatgcggctgtgcaa
ggtgcgttagcttcaaagtatcgtaatgcgggtcaaacttgtgtttgtactaaccgtatt
tttgtacaaagtgctgtgcttgaacaatttactgaaaaattcactgctgcagttaaaagt
ttagcgataggtaatggcttagatgaaggcgttaatatcggtccgatgatctctaataaa
gctgtgaatgacgtagcaaagctagttgaagattctattgctgctggcgcgaaagttatt
ttaggtggcaagcaagatagcgccggtgaaaacttttaccagcctactattttgagcaac
gtcaccaatgatatgcctattgcacaaaatgaaatatttggccctgtctctcctataatc
tcattcgatacagaagcagaagttattgctatggctaatgataccgagtttggtttagcc
gcctatttttattctcgtgatattggcaccatttggcgtgttggtgaaggattggaatac
ggcatgattggtatcaacgaaggcattatttctaatgctgcagcaccatttggcggtatg
aagcagtcaggtagtggtcgtgagggttctaaatatggacttgatgactatttagaaatt
aaatatttatgcatgggcggtttggacaagtaa
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