Colwellia sp. MT41: CMT41_11005
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Entry
CMT41_11005 CDS
T04159
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
com
Colwellia sp. MT41
Brite
KEGG Orthology (KO) [BR:
com00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
com03009
]
CMT41_11005 (rimO)
Enzymes [BR:
com01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CMT41_11005 (rimO)
Ribosome biogenesis [BR:
com03009
]
Prokaryotic type
ribosomal protein modification factors
CMT41_11005 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALO35191
UniProt:
A0A0S2JGN7
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All DBs
Position
complement(2580859..2582295)
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AA seq
478 aa
AA seq
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MTVTQFDPKQTTTLETPKKVIAEQSIIFTTKANQGEQSPVRAPKIGFVSLGCPKNLVDSE
RILTQLRTEGYDVTNSYEDAELVIVNTCGFIDSAVQESLDTIGEALAANGKVLVTGCLGV
KKDEIIELHPNVLGVTGPHAYDEVLKQVHEHVAKPEHNPFIDLVPPQGVKLTPKHYAYLK
ISEGCDHRCTFCIIPSMRGDLDSRPIGDVLGEAQRLKNAGVKELLVISQDTSAYGVDVKH
KTDFWDGMPVKTSMLALCEQLGKLGIWVRLHYVYPYPSVDKVIPLMAAGKILPYLDIPLQ
HASKRILKLMKRPGSSDRTLERIKKWREICPELVIRSTFIVGFPGETEDEFQELLDFLEE
AQLDRVGCFAYSDVDGATANNLPDHVDEAVKQERLQKFMAVQAKISAAKLQARIGQEYLI
LIDEVNELGAVGRSYADAPEVDGKVYLSDDFDAKPGDLIWVQIIHADDHDVWGVRVED
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacagttactcaatttgacccgaaacaaaccaccaccctagaaacacctaaaaaggtc
attgcagagcagtcaattattttcaccactaaagctaaccaaggtgaacaaagtccagtt
cgcgctccaaagataggcttcgtcagtctcggctgtccaaaaaacttggtcgactcagag
cgtattcttactcaacttcgtacagaaggttacgatgtaaccaatagttacgaagatgct
gaactggtgattgtaaatacctgtggctttattgatagcgcagtacaagagtctttagat
accataggtgaagcgttagccgcaaatggtaaagtgttggttaccgggtgtttaggtgtt
aagaaagatgaaattattgaacttcaccctaatgtcctcggtgtcactggcccccatgct
tatgatgaagtattaaaacaagtgcatgaacatgtcgccaaacctgagcataatcccttt
attgacttggttccgccacaaggggttaagcttacgcctaaacattatgcttatttaaaa
atatccgaaggttgtgatcatcgttgtactttttgcattatcccgtcaatgcgtggtgat
ttagactcccgtcccattggtgatgttttaggtgaagcgcaacgtttaaaaaatgctggc
gtgaaagagttattggttatctcgcaagatacttccgcttatggcgtagatgttaaacat
aaaactgatttctgggatggtatgccggtaaaaacaagcatgctagctttgtgtgaacag
ttagggaaattaggtatttgggtacgtttacattatgtttacccttatcctagtgttgat
aaagttattccgttaatggcggcaggtaaaatccttccttatctcgatataccattacaa
catgctagtaaacgtattttgaagttgatgaaacgccctggtagttcagatagaacgcta
gagcggataaagaaatggcgtgaaatttgccctgaattagtcattcgttcaacctttatt
gttggttttccgggtgaaaccgaagacgagtttcaagagttattagattttctagaagaa
gcacaattagatagagttggttgttttgcttattctgatgttgacggcgctaccgccaat
aacttgcccgaccatgttgatgaagcggttaagcaagagcgcttacaaaaattcatggcg
gtgcaagctaaaattagtgcggcaaaacttcaagcacgcataggtcaagaatatttaatt
ctcattgatgaagttaatgagcttggtgcggtagggcgctcttatgctgatgcgccagaa
gttgatggcaaagtttatttgtctgatgattttgatgccaagcctggcgatctgatttgg
gtacaaattattcatgccgatgaccatgatgtttggggcgttcgcgtagaagattag
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