Commensalibacter melissae ESL0284: GN303_05460
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Entry
GN303_05460 CDS
T06375
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
comm
Commensalibacter melissae ESL0284
Pathway
comm00190
Oxidative phosphorylation
comm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GN303_05460
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GN303_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
comm03019
]
GN303_05460
Enzymes [BR:
comm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GN303_05460
Messenger RNA biogenesis [BR:
comm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GN303_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
GCFC
Motif
Other DBs
NCBI-ProteinID:
QGT68736
LinkDB
All DBs
Position
complement(1224675..1226870)
Genome browser
AA seq
731 aa
AA seq
DB search
MIQKNPKNISNINHLTQNKITVKQSGRKIKQRNSIQISNNIKMDYERFINRELSWLDFNQ
RVVEEAENKHNPLLERVRFLSISASNLDEFYSVRVAGLTGQVREGLIALSPDGLTPAEQL
VAIQERVKGLFSDQQRIYHELIKLLSDSGIIVCKAEELNKEDLAWLHQFFMERIFPILTP
IALDPAHPIPFIPNLNLAIALRLISQNNSRKYVMILLPSQLLRFIPLPLSLCSNKIQRFV
LLEDLVRIFISSIFPGYKIANYGLLRVIRDTDVEFEEEAEDLVRSYETALKRRRRGVVIH
LDIDEHFPPKLGEIVAHALEVPPEEVTVHKGILGLVDVKQLIVDNRPDLLFPYYAPHLPA
RIRESAGDCFALLRSKDLLAYHPFESFDVVIQFLRQAAQDPQVLAIKQTLYRTSRDSPIV
KALIEAAENGISVTAIVELRARFDEEANIRLSRDLEAAGVQVVFGFADWKTHAKLSLVVR
REGGNIRSYAHFGTGNYHPITAKIYTDLSYFTCNAELTRDAAKLFNYVTGYARPDKMEKI
AFSPLTIRKTLNELIDDEIAFVKAGKPGAMWLKMNSLVDPQLIDKLYEASCAGVKINIIV
RGICCLRPGIKNLSENIFVKSIVGRFLEHARVFVFGNGYELPSRSAKVYMSSADWMERNM
DRRIEEMIPILPEDIHYKILNQLMVANLKDNMQSWQLGRDKKWKRLESSEPPFSAHNYFM
ENPSLDTRPLD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaaaaaatcctaaaaatatatcgaatatcaatcatttgacacaaaataaaatt
actgtgaaacagtcgggtcgtaaaattaagcagcgaaacagtattcagatatctaataat
atcaaaatggattatgagcgttttattaatcgggaattatcatggcttgattttaaccaa
agggtcgtagaggaagccgaaaataaacataatccacttttggaaagggtacgtttttta
tccattagtgcaagcaatcttgatgaattttattccgtacgtgttgcgggactgaccggt
caagtgagagaggggttgatagcactttctcctgatggtttaacacctgcagaacaatta
gttgctattcaggaaagggttaagggactatttagtgaccagcaacggatctatcatgaa
cttataaaattattgagtgactcaggtatcattgtttgtaaggcagaagagttgaacaag
gaagatctggcttggttacatcaattttttatggagcgtatttttccaatcctaacccct
attgccttggatcctgcccatcccattccatttataccgaatttaaatctcgcaattgct
ttaagattgattagccaaaataacagccgcaaatatgttatgattttattgccgtcgcag
ctgttgcgttttatacctttgcctttatcgttatgtagcaataaaattcaaaggtttgtt
ttattggaggatttggttaggatatttatttcatcgatctttcctggatacaaaattgcg
aattatggcttgttacgcgttattcgtgatacagatgtcgaatttgaagaagaagcggag
gatctggtgagatcctatgaaacagccttgaaaagaagaagacgcggggttgtgattcat
ttggatatcgatgaacatttccctccaaaacttggtgaaatagttgcccatgctcttgaa
gtgcctccggaagaggtgacggttcataagggaatactgggattggtggatgttaagcaa
ctcattgttgataacaggccagatctcctttttccatattatgcacctcatcttcccgcg
cgtattcgggaaagtgccggggactgttttgccctgttacgctcaaaagatttgttggca
taccatcctttcgagagttttgatgttgtgattcaatttttgcgtcaggcggctcaagac
cctcaggttttagccattaaacaaactttatatcgaacatcccgggacagtcccattgtc
aaagctttaattgaggcggcagaaaatggaatttccgtaacagccattgttgaattaagg
gcccgttttgatgaagaagccaatattcgtctttcacgggatttggaggcagccggtgtg
caggttgttttcggttttgccgattggaagacccatgcaaaattgagtcttgttgttaga
agagaggggggaaacatacgctcttatgcccattttggcactggcaattatcatccgatt
acagcaaaaatttatactgatttatcctattttacctgtaatgccgaattaacgcgtgat
gcggccaaattatttaattatgtcacgggatatgcacgtcctgacaaaatggaaaaaatt
gcgttttcacctctaaccatccgtaaaaccttaaatgaattgattgatgatgaaattgct
ttcgtaaaagcaggcaaaccgggtgcgatgtggcttaaaatgaattctcttgtggatcca
caattaattgacaaattatatgaggcgtcttgtgcaggtgtaaaaataaatataattgtt
cgaggaatttgctgtcttcgtccgggtatcaaaaatctttctgaaaatatatttgtcaaa
tcaattgttggccgttttcttgaacatgccagagtctttgtatttggaaacgggtacgag
cttccttcaagatcggctaaagtctatatgtcttctgcagattggatggaaagaaatatg
gatcgtcggatcgaggaaatgatacctatcttgccagaagatattcattataaaatttta
aatcagttaatggttgcaaatctgaaagataatatgcagtcttggcaattggggagggat
aaaaaatggaaacgtcttgaatcttcggaacctcctttttccgcacataactattttatg
gagaatccctcgttggatacaagacctttggattag
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