Commensalibacter melissae AMU001: D9V35_00385
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Entry
D9V35_00385 CDS
T05684
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq03030
DNA replication
coq03410
Base excision repair
coq03420
Nucleotide excision repair
coq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D9V35_00385 (polA)
03410 Base excision repair
D9V35_00385 (polA)
03420 Nucleotide excision repair
D9V35_00385 (polA)
03440 Homologous recombination
D9V35_00385 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coq03032
]
D9V35_00385 (polA)
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_00385 (polA)
Enzymes [BR:
coq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D9V35_00385 (polA)
DNA replication proteins [BR:
coq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D9V35_00385 (polA)
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D9V35_00385 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D9V35_00385 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
HHH_2
DprA_N
Motif
Other DBs
NCBI-ProteinID:
AYN86084
LinkDB
All DBs
Position
complement(87572..90352)
Genome browser
AA seq
926 aa
AA seq
DB search
MTSSSASNQKHLILIDGSGFIFRAFHAIPLMTDPSGTPVNAVYGFTNMMIKLIRDRVASH
MAVIFDAGRKTFRNEIYPAYKAHRPPPPEELVPQFSLVREASEILGLPTIEMAGWEADDL
IASYAKAIVADGGKCTIISSDKDLMQLINEHIQMQDPIKEKFIKIEEVRAKFGVSPTDMI
SLQALMGDPVDNVPGVPGIGPKTAAALIHEYGQLEDILAAIPMMKPSKRRDNLETNKENA
RISYQLVQLKDDIPLPTPIDQLNCCKADPEKVTAWLQKHGFRSILNRWTKNSHNTGDIPH
TSRRQETQTGPEPNKAVLAAPYHQYETILNNTQLQEWIHRIQTTHFCAVDTETDNLNALQ
ANLIGISLAVAPGKACYIPINHQIDGELLKPEQISLKNVIQYLGPILTDPSILKIFHNAK
YDFLVLEHNGFPQPAPYDDTMIISYNLAAGEHRHGMDELAKRYLNHQTISYDALTGTGRK
RIPFAQVSIEEATTYAGEDADVTLRLWEILRPQLRTAHVLGLYEEIERPLIPILTRMEQN
GIMIDASLLQKLSTTFTEKMSEKEKEIYHVSGEEFNLASPKQLGEILFDQMKLPGGKRMK
SGTWGTDVKVLQELSDQGHEIAEKLLAWRQLAKLKSTYTDALVKEINPETKRVHTSFNMV
GTVTGRLSSNDPNLQNIPIRTEDGGKIREAFIAKPSHVLVSADYSQIELRLLAHVANIPQ
LKESFIHNEDIHARTASEVFDVPINEMQPLLRRQAKAINFGIIYGISAFGLAKQLNVSSS
DAKQYIETYFKRYPEIRAYMQNTQEEAKEKGFVLTPFGRKCWIAGIKNSKGPQKAYAERQ
AINAPIQGGAADIIKCAMRDMDKIITEKKLPVSMLLQVHDELLFEVRTDYAETFVNLVKQ
TMENTVNLSIPLVVEAGIGKNWAEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatcttctgcatcaaatcaaaaacacttaatcctcattgatggatccgggttt
atttttcgtgcttttcatgccattcccttaatgactgatccatcaggaacacctgtcaac
gcggtttatggttttactaacatgatgataaaactaatccgtgatcgtgtggccagtcat
atggctgtcatttttgatgcaggaagaaaaaccttcaggaatgaaatttatccagcttat
aaagcacatagacctcctcctcctgaagagcttgttccccagttttcacttgttcgggaa
gcctctgaaattctgggattaccaacaattgaaatggcaggatgggaagctgatgatctt
attgcaagttacgcaaaagcaatcgtggcagatgggggcaaatgtacaattatttcttcc
gataaggatctgatgcaattaatcaacgaacatattcaaatgcaggatcccatcaaggaa
aaattcatcaagattgaagaggtacgagctaaatttggtgtgtccccaacagatatgatt
tccttacaagcattgatgggagacccggtagataatgtccctggagttcctggcataggt
cccaaaacggcagccgctttaattcatgaatatggacagttggaggatatccttgctgcc
attcctatgatgaaaccctccaaacggcgcgataatcttgaaaccaacaaggaaaatgca
cgaatttcatatcaacttgttcagctaaaagatgatattcctctacccaccccgattgat
cagttaaattgttgcaaggctgatcctgaaaaagttaccgcatggcttcaaaaacatgga
ttccgctccatattaaatcgctggacaaaaaattctcataatacaggcgacattcctcat
acatctcgcagacaggaaacacagaccggtcccgaaccaaacaaagcggttcttgccgcc
ccgtatcatcagtatgagaccattctcaataacacgcaattacaggaatggattcaccga
attcaaacaacccatttttgtgccgtggatactgaaaccgacaaccttaatgcattacag
gcaaatctaatcgggatttccctagctgtagccccgggtaaagcctgttatattcccatc
aatcatcaaatagatggagaattattaaaaccagaacaaatttcattaaaaaatgtcatt
cagtatcttggccccattctgacagatccttccatcctcaagatttttcataatgctaag
tatgattttcttgttttggaacataacgggttcccgcaacctgccccctatgatgacaca
atgattatttcttacaacctagcggcaggagagcacagacatggaatggatgaactggca
aaacgctatttgaatcatcaaacaatatcttatgatgcattaaccggaaccggtcgtaaa
cgtatcccttttgcgcaagtttcaattgaagaggcaacaacctatgcaggtgaagatgca
gatgtcactttgcgtttatgggaaatattgcgacctcaattaagaaccgcacatgttcta
ggtctttatgaagaaatagaacgtcccctaattccaatcctgaccaggatggaacagaat
ggaattatgattgacgcttcccttcttcaaaagctttctactactttcaccgaaaaaatg
tcagaaaaagaaaaagaaatctatcatgtttccggtgaagaattcaatttggcctcacca
aaacaacttggggagatcctttttgaccagatgaagttgcctggtggaaaacgtatgaaa
tctggtacatggggaacagatgtcaaggtattacaggaacttagcgatcagggtcacgag
attgctgaaaaactgctggcttggcgacaattggcgaaacttaaatccacctatacggat
gccttggttaaggaaataaacccggaaacaaaacgtgtacataccagctttaatatggtt
ggaaccgttacgggacgtttgtcttccaatgatcccaatttacaaaatatacctattcga
acagaagacggtggaaaaatcagggaagcatttattgccaagcctagccatgttcttgtt
tccgcagattattcacaaatagaattgaggcttcttgcacatgttgcaaatattccccaa
ttaaaagaatcctttattcataatgaggatattcatgcccgtacagcctcagaggtcttt
gacgttccaatcaatgaaatgcaacctttgctgcgtcgacaggccaaagcaatcaatttt
ggtattatttatggaattagtgcctttgggttagccaaacaattgaatgtttcatcatct
gatgccaaacaatatattgagacctattttaaacgttaccctgaaataagggcatatatg
caaaatacccaggaagaggcaaaggaaaagggatttgttctaacaccttttggcagaaaa
tgctggattgctggaattaaaaatagcaaaggtccacaaaaggcttatgccgaacgccaa
gccataaatgctcctattcaggggggcgccgccgacattataaaatgcgcaatgcgggat
atggacaaaatcatcacagaaaaaaaactccccgtaagcatgttattacaagttcatgac
gagttgctttttgaagtgcgaacagattatgctgaaacattcgttaatcttgtaaagcaa
acaatggaaaacactgttaatctttccattccccttgttgttgaggctggaataggtaaa
aactgggcagaagcacattaa
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