Candida orthopsilosis: CORT_0B00580
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Entry
CORT_0B00580 CDS
T02488
Name
(RefSeq) RNA polymerase II subunit B44
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cot
Candida orthopsilosis
Pathway
cot03020
RNA polymerase
cot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CORT_0B00580
09124 Replication and repair
03420 Nucleotide excision repair
CORT_0B00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0B00580
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0B00580
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CORT_0B00580
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CORT_0B00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
SMC_hinge
Motif
Other DBs
NCBI-GeneID:
14538198
NCBI-ProteinID:
XP_003867217
UniProt:
H8WZB1
LinkDB
All DBs
Position
2:complement(94686..95639)
Genome browser
AA seq
317 aa
AA seq
DB search
MDRDQGPSITIREQEEDRVDFVLGNVDLSVANALRRTMLAEVPTLAIDLVEIDVNTSVLA
DEFLAHRLGLIPLNSENIETLKYSRDCTCDNYCPKCSVTLELTAKCDTDSTMNVYASDLF
KLANGSSLGNPVVRDQADRGSIICKLRKHQELRLTCIAKKGIAKEHAKWSPCAAIGFEYD
PWNKLKHTDYWYEVDASEEWPKSKNCDWEEQPDPEEKFDYKAKPNDFYFDVETVGNLPPN
DVVLQSVNTLQTKLASIVIELDKERVEGSNVQDGAFTSYGRTDYGHGGETPMIGATTPYG
GDNSFGASGGYGGGSWN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggacagagatcagggaccatcaatcacaatacgagaacaggaggaagatcgtgtggat
tttgttttgggaaatgtcgatctatccgtggcaaacgccctcagaagaaccatgctcgct
gaagtacccacattagccatcgacttggtagaaattgacgttaatacctcggtccttgct
gatgagtttttagctcatagattaggtctcatacctctcaacagtgagaatatagaaact
ttaaagtactcaagagattgtacttgtgacaactattgtcccaaatgttcagtgacatta
gaattgacggctaaatgtgatacagactcaacaatgaacgtttatgccagtgatcttttt
aaattagccaacggtctgagtctaggcaatcctgtggtgagagatcaagcggataggggt
tccataatttgcaagttgagaaaacatcaagaattgcgtctaacttgtattgctaagaag
ggaatagctaaagaacacgccaaatggtcaccttgtgctgctatagggtttgaatatgac
ccatggaataaactaaagcatactgattactggtacgaagttgatgctagtgaagagtgg
ccgaagtctaaaaattgtgattgggaagaacaacctgatcctgaggaaaagtttgattac
aaagcaaaaccaaatgatttttattttgatgtggaaacagtgggaaatttacctccaaac
gacgttgtacttcaaagtgtcaatacattgcaaacgaaactagcatcgattgtaatagag
ttggataaggagagagtagagggaagtaatgttcaagacggtgcatttaccagttacggt
agaactgattatggtcatggtggagaaaccccaatgattggtgccactacaccatatgga
ggagacaattcttttggggcttctggtggctatggtggcggttcatggaattga
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