Colwellia sp. Arc7-635: EKO29_17335
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Entry
EKO29_17335 CDS
T06022
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00730
Thiamine metabolism
cov01100
Metabolic pathways
cov01240
Biosynthesis of cofactors
cov04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EKO29_17335 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
EKO29_17335 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cov03016
]
EKO29_17335 (thiI)
Enzymes [BR:
cov01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
EKO29_17335 (thiI)
Transfer RNA biogenesis [BR:
cov03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EKO29_17335 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AZQ85599
UniProt:
A0A3S9Q9R8
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All DBs
Position
complement(4034522..4035976)
Genome browser
AA seq
484 aa
AA seq
DB search
MKFIVKLQAEITIKSRPVRKRFTKILESSIKNVLRRVDEQVTTRMNWDNIEVNTANNTPE
NRLKLIDTLKSIPGIPTFLEVQQTDFTDVHDIYEKTLAVHAKNIENKSFCVRVKRTGKHD
FNSIKVEQYVGGGLNQQVESARVKLTKPDVTVYLEIKNENLFIVTERHKGMGGFPIATQE
DVLSLMSGGFDSGVASYQMIKKGARTHYCFFNLGGAAHEVGVKQVSYYLWNKFGASHKVK
FFAVDFEPVVAEILENIENGQMGVVLKRMMMRAAAKIADKMDIKALITGEAVGQVSSQTL
TNLNVIDRVTETLILRPLVAYDKQDIIDIARKIGTEDFAKTIPEYCGVISKKPTVKAVLS
KVEAEEANFDFSVLDKVINETRVYDIRDIGKESEEEIHAVDTLDNIPDNAIVLDIRSPEE
EDDNPLVIEGVEIMHLPFYKLTTQFGDLDKSKDYLLYCDQGVMSKLQALYLLGAGFTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaagttacaggctgaaattaccataaaaagccgtccggtgcgtaag
cgttttactaagatattagagtctagtattaagaatgttttacgccgtgttgatgaacaa
gtgacaacgcgaatgaactgggacaatattgaagttaacactgccaataacacaccagaa
aaccgcttaaaattaattgatacgttaaaatcaattccaggtattcctacattccttgaa
gtgcaacaaactgactttacagatgttcatgatatttatgaaaaaactctagctgttcat
gcgaagaacatcgaaaataaaagtttttgtgttcgcgttaagcgtacaggtaagcacgat
tttaattcgattaaagttgaacaatatgttggtggcggtttaaatcaacaagttgaatca
gcacgggttaaattgaccaaaccagatgtgacggtttatttagaaattaaaaacgaaaac
ttatttatagttactgaacgccataaaggtatgggcggctttccaatcgctactcaggaa
gacgttttatcattaatgtctggcggctttgattcaggtgttgcaagttatcaaatgatc
aaaaaaggtgcccgcacacactattgtttctttaatttaggcggcgctgcgcacgaagtt
ggtgttaagcaagttagctattatttatggaacaagtttggcgcatcacacaaagtgaag
tttttcgctgtcgattttgaacctgtggttgctgaaattcttgaaaacattgaaaatggt
caaatgggtgttgtacttaagcgtatgatgatgcgcgccgcagctaaaattgctgataaa
atggatattaaagcattaattactggtgaagcggtagggcaagtatcgagccaaacgcta
accaatttgaacgttattgaccgtgttaccgaaactttaattttacgcccgcttgttgct
tacgataaacaagatattatcgatatagcccgtaagattggtaccgaagattttgctaaa
accattcctgaatattgtggcgttatttctaaaaagccaaccgttaaggctgtgctatcg
aaagttgaagctgaagaagcgaattttgacttttctgttttagacaaagttatcaatgaa
acacgcgtttatgatattcgtgatatcggtaaagaaagcgaagaagaaattcatgctgtt
gatactctggataacattcctgacaatgcgattgtactcgatattcgtagcccagaagaa
gaagatgacaacccgttagttatcgaaggcgtagaaattatgcatttacccttttataaa
ttaactacgcaatttggtgatttagataagtctaaagattatctactttattgtgatcaa
ggtgtgatgagtaaactacaagcgctatatttattaggtgctggtttcactaatgtgaaa
gtttaccgcccttaa
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