Caminibacter pacificus: C6V80_02060
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Entry
C6V80_02060 CDS
T06023
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpaf
Caminibacter pacificus
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpaf03009
]
C6V80_02060 (rimO)
Enzymes [BR:
cpaf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C6V80_02060 (rimO)
Ribosome biogenesis [BR:
cpaf03009
]
Prokaryotic type
ribosomal protein modification factors
C6V80_02060 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QCI27789
UniProt:
A0AAE6EC03
LinkDB
All DBs
Position
complement(373223..374524)
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AA seq
433 aa
AA seq
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MKKLYLASLGCVKNLIDSEVMLGRLKDEYELTQNPSEADLIIVNTCGFINPAKEESIETI
LELANEKKENAKLVVTGCLSERYKDILPQEIPEVDIWSGVGDFGNIDKVIKSNKKKYFSP
KVYLIHNEDRVITGSAYHAYIKLSEGCNQKCAFCAIPNFKGRLNSRPIEEIIEEIKRLKA
KGYKDFSLASQDSSSYLRDKGIKDGLERLIDEIDKIEGITVRILYLYPATTTKRLIRKIF
SSKKVQNYFDMPIQHISPKMLKIMRRPGSVERLKELLYEMRKEFSFVRTSVIVGHPGESE
EDFNELKEFLKEYEFDRVNVFAYSDEEDTPAFKRKDKIPQDIIEKRVKEISKIVKKTTKK
ALKKYVGKICECYMDGLTKDNLFYSVRPKLWAPEVDGDILVNESEIENLKVGELYKVKVE
NLAGEDLIGKIIK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagctctatttggcttctcttggatgtgtaaaaaatttgatagacagcgaagta
atgctcggtcgtttaaaagatgaatacgagctaactcaaaacccgagcgaagcggatttg
ataatagtaaatacctgcgggtttatcaatccggcaaaagaagaatctatcgaaactatc
ttagaacttgccaacgaaaaaaaagaaaacgcaaaactcgtagtcacgggatgtcttagc
gagagatataaagatatcctgcctcaagaaattcctgaagtcgatatttggagcggtgtt
ggagatttcggaaatatcgataaagtaataaaatcgaataaaaagaaatatttttcaccg
aaagtttatttaatccataatgaagatagagtaatcaccggaagtgcgtatcacgcttat
attaaacttagcgaagggtgcaatcaaaaatgtgcattttgcgctattcctaacttcaaa
ggcagattaaattcccgtcctatcgaagaaataatagaagagattaaaagattaaaagca
aaaggctacaaagacttctcactcgcaagccaagacagcagctcgtatctaagagacaaa
ggaataaaagacggacttgagagacttattgacgaaatagataaaatcgaaggtattacc
gttcgaatactatatctctacccggcaaccactacaaaaagattgataagaaaaattttt
tcatcaaaaaaagtccaaaattattttgatatgccgattcaacatatcagccctaaaatg
ctaaaaattatgagaagaccgggcagtgtcgagagattaaaagaacttctttacgaaatg
agaaaagagttttcttttgtcagaacttccgtgatcgtaggtcatccgggtgaaagtgaa
gaggattttaacgaacttaaagagtttttaaaagagtacgaatttgacagagtaaacgtt
tttgcttattccgacgaagaagatacgcctgcatttaaaagaaaagacaaaatccctcaa
gacataatcgaaaaaagagtaaaagagattagcaaaatagtcaaaaaaacaactaaaaaa
gctcttaaaaaatatgtcggtaaaatttgtgaatgctatatggacggattaaccaaagat
aatcttttctattcggtaagaccgaaactttgggctcccgaagttgacggagacatttta
gtaaacgaaagcgaaatagaaaatttaaaagtcggcgaactttataaagtaaaagtggaa
aatttagccggagaagatttaattggaaaaatcatcaaataa
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