Carica papaya (papaya): 110813235
Help
Entry
110813235 CDS
T05151
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpap03016
]
110813235
Enzymes [BR:
cpap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
110813235
Transfer RNA biogenesis [BR:
cpap03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
110813235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
110813235
NCBI-ProteinID:
XP_021895968
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MEDIEDLLVGRGAEGAPPGFRLPLTSVGVVPRKNRNRTKLNDDKISPIYDPLTPPSLKIP
GTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYLLADDPEEADLWLINTCTVKSPSQSAMNT
IIAKGKSAKKPLVVAGCVPQGSRDLKELEGVSIIGVQQIDRVVEIVEETLKGHEVRLLTR
KILPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVRTVIGD
GVKEIWLSSEDTGAYGRDIGVNLPILLNAIVAELPSDGSTMLRIGMTNPPFILEHLKEIA
AVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTVTEFRTVVDTLTELVPGMQIATDIICGF
PGETDEDFARTVSLVKEYRFSQVHISQFYPRPGTPAARMKKVPSTTVKNRSRELTSVFEA
FQPYNGMEGRVERIWITDIATDRVHLVGHTKGYVQVLVIAPEGLLGTSAIVKITSVGRWS
VFGEVIEIVNQPNNKTATNWRVSSEHKCSSLSDPYKPCSCSGLSESCACGPESCRGQQSN
FSKRELLEDQSKRNLAGWFLRKRNNLVRKKIQSEKASGVKKQEQSRGSTGEWDFIDRVLL
GGMLVSSFTVIILLIYLYITLLSK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaggatctgttagtcggcaggggagctgagggtgctccgcccggtttc
cggttaccattaacctctgttggagttgttcccaggaagaataggaatagaactaagctg
aacgacgataagatttccccaatttatgaccctctcacccctccttccctcaaaatccct
ggcactcagaccatatatataaagacttttggatgctcacataaccagagtgacagtgag
tatatggctggtcagctttcagcatttggttatttattggctgacgatccagaagaggca
gatctgtggctaataaacacatgtactgtgaaatctccaagccagtctgctatgaacaca
ataatagcaaaaggaaaatctgctaaaaagcctctggtggtagctgggtgtgtgcctcaa
ggaagtcgagatctgaaggagttagaaggggtcagtatcattggtgtccagcaaattgac
cgtgtagttgaaattgtagaggaaaccctgaagggtcatgaagtgcgtcttttgactcgc
aagattttgccagcacttgaccttcctaaggtgagaaaaaataagtttgtcgagattctc
ccaattaatgttggctgtttaggtgcttgtacctattgcaagacaaagcatgcacgtggt
catttgggaagctatacagttgatagccttgtgggacgagtaagaactgtcataggtgat
ggagttaaagaaatatggttgagcagtgaagatactggagcatatggtcgcgatattggg
gttaatcttcccatcttgttaaatgctattgttgctgaacttccttctgatgggagcaca
atgctaagaattgggatgaccaaccctccttttattcttgagcacttgaaagagatagct
gctgttttgcgccacccatgtgtatactcctttcttcatgttccagtccaatctggaagt
gatgctgtcttgagtgcaatgaaccgagaatatacagtgactgaattcaggaccgttgta
gataccttgacagaacttgtgccaggaatgcagatcgcaactgatataatttgtggattc
cccggtgaaacggatgaagattttgctcgaacagtgagccttgttaaggaatacaggttc
tcccaagttcatatttcacagttctatcctagaccagggacacctgcagcaagaatgaag
aaggttccaagcacaacagtgaagaaccgaagccgtgaattgacgtctgtttttgaagct
ttccaaccttacaatggaatggaaggcagagttgaaagaatatggataactgatatagca
actgacagagttcacttggttggacataccaagggatatgtgcaggttcttgtaattgct
ccggagggtttgttgggtacttctgctattgtaaagataacatctgtgggaagatggtcg
gtttttggagaggtgattgagattgtcaaccaaccaaataacaaaacagctacaaactgg
agagtgtcgagtgagcacaaatgttcatccctttctgacccatacaagccttgttcatgc
tccggattgtcagaatcttgtgcctgtggaccagaaagctgcagaggacaacagagtaat
ttttcaaagagggaactgttggaagatcaaagcaaaagaaatcttgctggatggttccta
cggaagcggaataatctagtgcgaaagaaaatacagagtgagaaagcctcaggagtgaag
aagcaagaacagtctcgtggaagcacgggtgaatgggatttcattgatagagtgcttctc
ggtggaatgcttgtcagctccttcacagttataattttactcatatatctttacataact
ctgttgtccaagtaa
DBGET
integrated database retrieval system
