KEGG   Carica papaya (papaya): 110821511
Entry
110821511         CDS       T05151                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03020  RNA polymerase
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110821511
  09124 Replication and repair
   03420 Nucleotide excision repair
    110821511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpap03021]
    110821511
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110821511
Transcription machinery [BR:cpap03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110821511
  RNA polymerase III system
   RNA polymerase III
     110821511
  RNA polymerase I system
   RNA polymerase I
     110821511
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110821511
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 110821511
NCBI-ProteinID: XP_021907066
LinkDB
Position
Unknown
AA seq 147 aa
MSSNIVLFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMAVGDKFTM
ALAHTLNPDGTPDTGYYTPGARKSLADKYEYIMHGKLYKISDRASGKTLKAEIYVSYGGL
LMMLKGDPSYVANFELDQRLFLLIRKL
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtcttcaaatatagtgctttttgaggacatctttgtggtcgataagctggacccggat
ggcaagaaatttgataaagttactcgcattgaagcaaggagccagaactgtgacatgttc
atgcatttggatgtaaacacagagatatatccaatggctgttggtgataaattcacaatg
gcactggctcacacactgaatccagatggaacacctgacactggatattatactccgggt
gcacgcaagtcacttgcagataaatatgagtacattatgcatgggaagctatacaagatc
tcagatcgcgcgtctggaaaaacacttaaagcagaaatatatgtatcatatggtggactt
ctaatgatgctcaagggagatccttcatatgttgctaatttcgagcttgatcagagattg
tttcttcttattaggaagttgtaa

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