Clostridium perfringens 13: CPE1691
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Entry
CPE1691 CDS
T00074
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe03030
DNA replication
cpe03430
Mismatch repair
cpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPE1691
03430 Mismatch repair
CPE1691
03440 Homologous recombination
CPE1691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpe03032
]
CPE1691
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE1691
Enzymes [BR:
cpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPE1691
DNA replication proteins [BR:
cpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPE1691
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPE1691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
Rv2179c-like
RNase_H_2
tRNA_anti-codon
DEDDh_C
DNA_pol3_a_NI
HHH_3
YhfH
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BAB81397
UniProt:
Q8XJR3
LinkDB
All DBs
Position
complement(1966403..1970752)
Genome browser
AA seq
1449 aa
AA seq
DB search
MSNEFVKQINRSIKSDDNLNDLEFEITKFQLLKKSNTLRTIIKSKDQLSEEQKKIIKQYI
KKAIGFEINIEIMYYIDISDITLKQVVDQHWNHVCEKIIEKHPVLKEVLLNSPIVIEGEK
IIIKNGSEFLCTFVNKKHIDREIKGYIKSFFGINSLVEVKYDESLANKNYNDEKLNENKE
IAKKVIETMKAQAAQEKPVKKESSDNKHKSNGGNKGGYEKKSYKDEPKNENTILGRNIQG
DTIDISSIDMGSGIVTISGDVFKTDIFETKTGRIILTFFITDYTSSIAVKCFLRDKDKEH
VLENVKKGLYCKVRGEATMDPYAKEVVIMARDINKLTKIERMDTAEEKRVELHMHTTMSS
MDAVTAASKIVERAAKFGHKAVAITDHGVVQAFPDAQIAAKKNNIKVIYGVEGYLADNGT
PIVINGHEESFDDEYVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIP
YKITELTSITQNMVNGQPTIDEVLPKFMEFVGNSVLVAHNAAFDVGFIKKNLMDMGKTLK
NPVMDTVPLARYLYPDLKKVKLNLVAKHLGISLENHHRAVDDAKATAEILKFSFKKMKEE
MDIHDVKTLNEKYLSNIDVKKLPLHHIIILAKNQTGIKNLYKLVSMAHLDYFARRPRLPK
SIITEYREGLIIGSACEAGQLYKAVLEGKTDGELKEIASFYDYLEIQPIQNNEFLIRKGN
VKDEEELRELNRKIYDLGKEMDKPVVATCDCHFLDPNDEVFRRIIMAGQGYGDADNQPPL
YFRTTNEMMKEFEYLGEEACREVVIENTQKIADMVEAVKPIPDETFPPKIEGAEEEIRNM
TMNKVHSIYGENLPEVVQKRLDKELNSIINNGYAVLYLIAQKLVAKSLEDGYLVGSRGSV
GSSFVATMSDITEVNGLPPHYVCPNCKKSEFFLDGSISSGADLPDKNCPDCGAKYIKDGH
DIPFETFLGFEGDKEPDIDLNFSGEYQAVVHKYTEVLFGKGYVFKAGTIGTVAEKTAYGF
VKKYLQERGLVVSQAEIERLTIGCTGIKRTSGQHPGGIMVVPNDNEIYNFCPIQHPADDV
NTDIITTHFDYHSISGRLLKLDILGHDDPTVLRMLQDLTGLDPKTIPLNDPKVISLFTSP
DALGVTKEELGCEVGSYGLPEFGTKFVRQMLVDTQPKSFADLVRISGLSHGTDVWLNNAQ
YFIKEGYTTLKDCIATRDDIMVYLMYKDLPPKTAFTIMEKVRKGKGLSEEDEALMREKNV
PDWYIESCKRIKYMFPKGHAVAYVMMAVRIAYYKVYYPEAYYTTYFTVRADDFDADLICK
GEEAIKAKMEELNSLGNNISVKEKGLLTILEISYEMYKRGLNFLKVDLYKSEATKFKIEE
DGIRPPLNALQGVGDNAAKSIVECRVNGEFISKEDLRLRSKVSKTVIETLDNHGCLEGMQ
ESNQLSLFG
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgagtttgttaaacagattaacagatccataaaatcagatgataatcttaat
gatttagagtttgaaataactaagtttcaattgttgaagaaaagcaatactttaagaacc
ataataaaaagtaaagatcaattatcagaagaacaaaagaaaataattaagcaatatata
aaaaaagctataggttttgaaataaatatagagattatgtattacatagatatttctgat
ataactttaaaacaggtagtagatcagcattggaatcatgtttgtgaaaaaattatagag
aaacatcctgttttaaaagaagttttacttaattctcctatagtaattgaaggagaaaaa
ataattataaaaaatggttctgagtttttatgtacttttgttaataagaaacatatagat
agagagattaagggatatataaaatcattctttggaataaattctttagtagaagttaaa
tatgatgaaagtttagctaataagaattacaatgatgaaaagttaaatgaaaacaaagaa
atagctaaaaaagttatagaaactatgaaagctcaagctgctcaagaaaagcctgttaaa
aaagaaagtagtgataataaacataaatctaatggtggcaataaaggtggttatgagaag
aaatcttataaagatgagcctaagaatgaaaatactatacttggaagaaatattcaagga
gatactatagatataagcagtatagatatggggtctggaattgttactatttcaggagat
gtatttaaaactgatatttttgaaactaagacaggtagaataatacttacattcttcata
acagactatacaagttccatagccgttaaatgcttcttaagagataaggataaagaacat
gttttagaaaatgttaaaaaaggtctttattgtaaagtaagaggggaagctactatggat
ccttatgctaaggaagttgtaataatggctagggatataaataagcttacaaaaatagag
cgtatggatacagcagaggaaaaaagagtagaacttcatatgcatacaactatgagctca
atggatgccgtaactgctgcaagtaaaattgttgagagagcagcaaagtttggccataag
gctgtagccataacagaccatggagttgttcaggcttttccagatgctcaaatagcggct
aaaaagaataacataaaagttatttatggagtagagggatatttagctgataatggaaca
cctatagttattaatgggcatgaggaatcttttgatgatgagtatgtggtttttgatata
gaaaccacaggtttttcaagtaaaaatgataagattatagaaattggtgctgttaagtta
aaggatggagaaatagtagattcatttagtacttttgttgatccaaaggtaaatattcca
tataagattacagagcttacaagtataactcaaaatatggttaatggacagcctactata
gatgaagtgcttcctaaatttatggagtttgtaggaaattctgtattagtagcccataat
gctgcctttgacgttggttttataaaaaagaacttaatggatatgggaaaaactttaaag
aatcctgtaatggatactgttcctttagctagatatctttatccagatttaaaaaaggtt
aagttaaatctagttgctaaacatttaggaattagccttgaaaatcaccatagagccgtt
gatgatgcaaaggctactgcggagatattaaagttttctttcaaaaagatgaaagaagaa
atggatattcatgatgttaaaactctaaatgaaaagtatttatcaaatatagatgtaaag
aaacttcctctacatcacataataatattagctaaaaatcaaactggaattaagaattta
tataaattagtttctatggctcacttagattactttgctagaaggccaagacttcctaaa
agtataataactgagtatagagaaggattaataattggttcagcttgtgaagcagggcaa
ttatataaggcggttttagaaggcaagacagatggggaattaaaagaaatagcatctttt
tatgactatctagaaattcagccaatacaaaataatgaattccttataagaaaaggaaat
gtaaaggatgaagaagagcttagagagttaaatagaaaaatatatgatttaggaaaggaa
atggataaaccggtagttgctacatgtgattgtcatttcttagatcctaatgatgaagta
tttagaagaataataatggctggtcaaggatatggagatgcagataatcaaccaccttta
tattttagaactactaatgaaatgatgaaagagtttgaatatttaggagaagaggcttgc
agggaagttgtaatagaaaatactcagaagatagctgatatggttgaggctgtaaaacct
ataccagatgaaacatttcctcctaaaatagagggggctgaggaagaaataagaaacatg
actatgaataaggttcatagtatatatggagaaaatcttcctgaagttgttcaaaagaga
ttagataaagaacttaattctataataaataatggatatgcggtgctttatcttatagct
caaaaattagttgctaaatccttagaagacggatacctagttggttcaagggggtctgtt
ggttcctctttcgtagcaacaatgtcagatataacagaggttaatggattaccacctcat
tatgtttgtccaaattgtaagaaatcagaatttttcttagatggttctataagttcagga
gcagatttaccagataaaaattgtcctgattgtggagctaagtatattaaggatggccat
gatattcctttcgaaacattcttaggttttgaaggggataaagaaccagatatagacctt
aacttctcaggggaataccaagctgttgtacataagtacacagaggttcttttcggaaaa
ggatatgtatttaaagctggaactataggtacagtagctgaaaaaacagcttatggtttt
gtaaaaaaataccttcaagaaagaggattagttgtatctcaagctgaaatagaaaggctt
actattggatgtactggaataaaaagaactagtggacagcatcctggtggaatcatggtt
gttccaaatgacaatgaaatatataatttttgtccaatacaacatccagctgatgatgtt
aacacagatattataacaactcactttgattaccattcaataagtggtagacttcttaag
cttgatatacttggacacgacgacccgaccgttcttagaatgcttcaagacttaactggc
ttagatcctaagacaatacctttaaatgatcctaaggttataagtttatttacatcacca
gatgccttaggggtaactaaagaagaattaggatgtgaagttggtagttatggacttcct
gagttcggtactaaattcgttagacagatgctagttgatactcaacctaagagttttgca
gaccttgtgagaatatctggactttcacatggtactgatgtttggcttaataatgctcag
tactttattaaagaaggttacactacactaaaagattgtatagcaacaagagacgatatt
atggtttatcttatgtataaagatcttcctcctaagacagcctttactataatggaaaag
gtaagaaaaggaaaagggcttagtgaagaggatgaagctttaatgagagagaaaaatgta
ccagattggtatattgaatcttgtaaaagaataaaatacatgttccctaaaggccatgct
gttgcatatgttatgatggcagttagaatagcatattataaagtttattatccagaagca
tattacacaacatactttacagtaagagctgatgatttcgatgcagacttaatttgtaag
ggtgaagaagcaataaaggcaaaaatggaagagctaaattctttaggaaataacatatca
gtaaaagaaaaagggcttttaactattttagaaatttcttatgaaatgtataaaagagga
ttgaatttcttaaaggttgatttatataaatcagaagcaactaagtttaagatagaagaa
gatggtataagacctccattaaatgctcttcaaggagttggagacaatgctgcaaaaagt
atagttgaatgtagagttaatggagagtttatttcaaaggaagatttaagacttagatct
aaggtttcaaagactgtaatagaaactttagataatcatggatgcctagaaggaatgcaa
gaaagtaaccaacttagtttgtttggctaa
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