Chaetura pelagica (chimney swift): 104385828
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Entry
104385828 CDS
T08631
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04020
Calcium signaling pathway
cpea04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104385828 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104385828 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104385828 (GRIN1)
Ion channels [BR:
cpea04040
]
Ligand-gated channels
Glutamate (ionotropic)
104385828 (GRIN1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
104385828
NCBI-ProteinID:
XP_009992629
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSSFVKLRFEGSLEKCMGSKILLNVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLT
TRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLET
LLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVIIL
SASEDDAATVYRSAAVLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHI
SDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFN
EDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIV
TIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLL
IRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNER
AQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRF
SPFGRFKVNSEEEEEDALTLSSAMWFSWGXXXNSGIGEGAPRSFSARILGMVWAGFAMII
VASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR
KDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGG
IVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRSI
TSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgtcaaactgaggtttgaaggaagcttagagaagtgcatgggctcaaag
atccttctgaatgtctatgcaatcttagttagccaccctcctgctcccaacgaccacctc
accccaacacccgtgtcctacactgctggtttctaccggatcccagtcattggtctgaca
acacgcatgtctatctattctgataagagcatccacctgtccttcttgcgcacagtccca
ccatactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactggaaccac
gtcattctgatagtcagcgatgaccacgaaggtcgtgctgcacaaaagaagctggagacc
ctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgaccaactt
tcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccctggaacc
aaaaacgtgacgtcgctgctgctggaggccaaggagctggaggctcgtgtcatcatcctt
tctgccagtgaggatgatgcagccaccgtgtaccgctcagcagccgtgctcaacatgacg
ggctcgggctacgtctggctggtgggggagcgggagatctcaggcaacgccctgcgatac
gcccctgatggagtcatcgggctgcagctcatcaatgggaagaacgagtcagcccacatc
agcgacgccgtggccgtggtggcacaggccgtgcacgacctgtttgagaaggagaacatc
acagacccaccacggggctgcgtgggcaacaccaacatctggaagacaggaccccttttc
aagagggtgctgatgtcctccaagtattctgagggtgtcactggacgggtggagttcaat
gaagatggggacaggaagtttgccaactacagcatcatgaacctgcagaatcggaagctc
gtccaagttgggatttacaatggcagccacgtcttgaccaacgaccggaagattatctgg
ccagggggagaaacagagaaacctcaaggctatcagatgtcaaccaagttgaagatcgtg
acgatccatcaagagccctttgtgtatgtgaagcccacgcaagcagatgggacatgcagg
gaggaattcaccatcaatggagatcctgtgaaaaaggtcttttgcactggacccaacgag
accatcccaggccgccccaccgtggctctgtgctgctacggcttctgcatcgacctgctc
atccggctggcaggagtgatgaacttcacctacgaggttcacctggtggctgatggtaaa
tttggtacccaagagcgggttaacaacagcaacaagaaggagtggaacggaatgatggga
gagctgctgagcggccaggctgacatgatcgtggctcccctcaccatcaacaacgagcgg
gctcagtacatcgagttctccaagcccttcaagtaccagggactcaccatccttgtgaag
aaggaaatcccccgcagcaccctggactcgttcatgcagcctttccagagcactctgtgg
ctactggtgggactgtccgtgcacgtggtggccgtgatgttgtacctcctagacagattc
agcccctttgggcggttcaaagtgaacagtgaggaggaggaggaagatgccctgaccctc
tcctcagccatgtggttctcctggggnnnnnnnntgaactctggcattggagaaggtgct
ccccggagtttctctgcccgtattcttggcatggtgtgggctggctttgccatgatcatt
gtggcttcatacactgccaacctggcagccttcctggtgttggacaggcctgaggagaga
attacgggcatcaatgacccccggctgcgcaacccctcggataagttcatctatgccacg
gtgaagcagagctcagtggacatctacttcagacggcaggtggagctgagcaccatgtac
cggcacatggagaagcacaactacgagagcgcggccgaagccatccaggcagtgagggac
aacaagctccacgccttcatctgggactcggcagtgctggagtttgaagcctcccagaaa
tgtgacctggtgacaacgggggagcttttcttccgctctggcttcgggatcgggatgcgc
aaggacagcccatggaagcagaacgtctctctggccatcctcaagtcccatgagaacggc
ttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgtagcaat
gccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggctggaggt
attgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataaggacgcg
cggaggaagcagatgcagctggcgtttgcagccgttaatgtgtggaggaaaaacctgcag
gatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttaggtccatc
acctctaccctggcctccagcttcaagagacgtaggtcctccaaggatacgcagtatcat
cccaccgacattaccggccagctcaacctctctgacccctcagtcagcactgtggtgtga
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