Chaetura pelagica (chimney swift): 104387365
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Entry
104387365 CDS
T08631
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104387365
Ion channels [BR:
cpea04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104387365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
IQCJ-SCHIP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
104387365
NCBI-ProteinID:
XP_009994410
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRVNEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVTILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSV
GENGTFINTTMTTFNWDEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGM
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFADDEHS
TFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRIAPPLPANGKMHSTVDCNGVVSLVGG
PPALMSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTDQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKAREFIQKACVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEEALEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEQLIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRQKVKKVSCIFNQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcccttgccgctattgagcagcgtgtcaatgaagaaaaagctaaaaaatccaaacaggaa
cgtaaagatgatgatgatgaagatggtccaaagccaaacagcgacttggaggcagggaag
acgctgccatttatttacggcgacatacctccaggaatggtgtcagagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgctctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgctaatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaagaggcttctgt
ctagaagattttacatttcttcgagacccatggaactggcttgatttcaccgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactattgtaggagcc
ctaattcaatccgtgaagaagctctcagatgttacgatcctgactgtgttttgtctgagc
gtatttgcactaatagggctgcagttgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcctactttaatagctctgta
ggtgaaaatggtacatttattaatacaacaatgacaacgtttaactgggatgagtacatc
gaagacagaagtcatttctactttttggaaggacaaaatgatgctcttctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgggctgctgggaaaacc
tacatgatattttttgttttggtcattttcctgggttctttctacctgatcaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaagaggaggct
caggcagcagcagcagctgcagcagctgactcaagagactatagtggagtaggtggaatg
ggcggattctccgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
aggaggaatagaagaaagaaaaaaaagcagaaagagcagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaggaaaggtttccgcttt
tccattgaggggaatagactgacatacgaaaagaggttctcttccccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatataggatcagaaaatgacttcgctgatgatgagcacagc
acttttgaagacaacgacagcagaagagattccctctttgtgccgcgcagacatggtgaa
cggcgcaacagtaacattagtcaggccagtaggtcatccaggatagcacctccacttcca
gcaaatgggaagatgcacagcactgtggattgcaatggagtggtttctttagttggtggg
ccaccagctctgatgtcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacagaaactgacttaaggaagagacggtctagttct
tatcatgttcctatggactacctaacagatcctagtgcaaggcaaagagcaatgagcata
gccagcatgcttacaaacacaatggaagaactggaagaatccagacagaaatgtccacca
tgttggtataaatttgctaacacttgtttgatctgggactgctgtactccctggctgaaa
gttaaacatattgtaaatttgattgtgatggacccatttgtggatctggccattacgatc
tgtattgtcctgaacaccctgttcatggctatggagcactatccaatgacggaccagttt
agcggtgtgctttccgttggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagagggatggaatatttttgat
ggttttattgttagtcttagtttaatggagcttggccttgcaaatgtagaaggattatct
gtccttcgatcattccgattgcttcgagttttcaaactggcaaaatcttggccaacgcta
aatatgctgattaagattattggcaactcagtgggggctctggggaatctgaccctggtt
ctggccatcattgtgttcatttttgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctctagcgactgtgaactcccacgctggcacatgcatgac
tttttccactctttcttgattgtattccgagtgctgtgtggagaatggatagaaactatg
tgggattgtatggaggttgcaggccaaaccatgtgccttacggtcttcatgatggtcatg
gtgattggaaacctagtggtactcaacctctttttggccttgttgctgagctcatttagt
tcagacaaccttgctgctactgatgatgataatgaaatgaacaatctacagattgctgtg
gcaaggattcagaagggaatagattatgtgaagagaaaagcccgtgaatttatccaaaaa
gcctgtgttagaaagcagaaagttttagatgaaatcaaacctcttgaagacctaaacaac
aaaaaagacagctgtatttccaaccacacaatagtagaaataggtaaaaaccttgcctat
ctaaaagaagggaatggaactaccagtggcataggcagcagcgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtcttactgtgacagtgcccatt
gctgtcggggaatcagattttgaaaatttaaatacagaggagttcagcagcgagtcagac
ctggaagaaagcaaagagaaattaaatgcgtccagttcttcagaaggcagcacagttgat
attggattgcctccagaaggggaacagccagaagcagaacctgaagaagctctggagcca
gaggcttgttttacagaaggctgtgtgcggagattcaaatgctgtcaagttagtgtagaa
gatgggaaagggaaaatctggtggaatcttagaaaaacatgctataagattgtggaacac
aactggtttgagaccttcattgtcttcatgattcttctcagcagcggcgctctggcattt
gaagatatatacatagaacaacgtaaaactatcaagaccatgttggaatatgctgacaaa
gtttttacttatatcttcattctggaaatgcttttaaagtgggtggcttatggctttcag
acctatttcactaatgcgtggtgctggctggacttcctgattgttgatgtgtctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcacgttttgaagggatgagggtggttgtg
aatgccctcttaggagcaatcccatccattatgaatgttcttcttgtttgccttatattc
tggctgatcttcagtatcatgggagtaaatctgtttgctggaaagttttactactgtgtt
aacactacaactgatgagagatttgatatcagccaaatcaacaattatagccaatgtgag
cagctcataaaaaacaatgaaactgcccgatggaagaatgtgaaggttaactttgataat
gtaggccttggttatctttctctacttcaagtggctacatttaaaggatggatggatata
atgtatgcagctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctg
tacatgtatctttattttgtcatctttataatctttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
atctttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggttcaaag
aaaccacaaaagcctatacctcggccagctaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcatttgatatcagtattatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggaaaacattttatattggattaac
ctggtgttcattgtacttttcactggagaatgtgtcctgaaattgatttcgcttcgccat
tactacttcactataggctggaacatttttgattttgtggttgtgattctctccatagta
ggtatgttcttagcagagatgattgagaaatattttgtatcccccacactcttcagagtc
atccgacttgccagaatcggtcgaatcctgcgtctcattaagggcgctaaggggatccgc
actctgctttttgctctcatgatgtctcttcctgctttgttcaacattggtctgctgctc
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctatgttaagagg
gaagttggaattgatgacatgttcaactttgaaacctttggcaacagcatgatctgcctt
tttcaaattaccacatctgctggctgggatggtttgctggccccaattcttaacagtggg
gagccagactgtgacccccataaagatcatccagggagttctgtgaaaggtgactgtgga
aacccttccgttgggattttcttctttgtcagctacattatcatatcgtttttggtagtg
gtgaacatgtacattgctgtcattttggagaacttcagtgttgctactgaagaaagtgct
gaacccttgagtgaggatgactttgagatgttctatgaagtttgggagaagtttgatcct
gatgcaacacaattcatagagttcagtaagctctcagactttgcagcttcattagatcct
cctcttcttatagcaaaaccaaacaaagtccagcttattgcaatggacctgcccatggta
agtggtgacagaattcactgcttagacatcctgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggatgccctgagaatacagatggaagatcggtttatggcagccaat
ccttcaaaagtgtcctatgaaccaatcacaactacattaaaacggaaacaggaggaagta
tctgctgtcattattcaacgggcttatagacgtcaccttttaaggcaaaaagtcaaaaag
gtttcatgtatatttaatcaggataaaggtaaggaggaggatgatctgcccatgaaagaa
gatatgattatggataaactaaatgagaactctactccagaaaaaacagatatgacccca
tccacaacctctccaccatcctatgatagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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