Chaetura pelagica (chimney swift): 104388324
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Entry
104388324 CDS
T08631
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104388324 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpea01001
]
104388324 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104388324 (TAF1)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104388324 (TAF1)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104388324 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104388324 (TAF1)
Protein kinases [BR:
cpea01001
]
Serine/threonine kinases: Other
TAF1 family
104388324 (TAF1)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104388324 (TAF1)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104388324 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
TBP-binding
Cac1_C
Ribosomal_L44
zinc_ribbon_12
Motif
Other DBs
NCBI-GeneID:
104388324
NCBI-ProteinID:
XP_009995486
LinkDB
All DBs
Position
Unknown
AA seq
1866 aa
AA seq
DB search
MSDSESEEEADGGQSEPFSLAGFLFGNINEAGESKKHLAGLGVLGLGNLITEITASEEEG
PEADGAHLDEEGWVKSTEDAVDYSDINEVAEDESRRYKQAMGSLQPARRPDEDEDDYDAD
CEDIDSKLMPPPPPPPVPGKKEDEKDATATVSEDGDGIILPSIIAPSSAASDKVDFTSSS
DSESEVGPQEARQAESKEGKLTLPLAGIMQRDATKQLPSVTELFPEFRPGKVLRFLRLFG
PGKNVPSVWRSARRKRKKKHRELAQEVHVQEGEVVVESGMEGKSPWEYEFAAPPPPEQCL
SDDEITMMAPVESKFSQSTGDIDKVTDTKPKVAEWRYGPAQLWYDMLGIPEDGSGFDYGF
KLKEKTEQEVKGHTDEGVRGELRGKKDDLLADEHFLMVTQLQWEDDVIWNGDDVKHKGTK
TQRASLAGWLPSSMTRNATAYNAQQGFYPVTVAVSLDEDKPWYSIFPIDNEELVYGRWED
NIIWDDQAMETYLDPPVLTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILL
GKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPF
FPTHMGPMKLRQFHRPPLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEM
FFMRTPQDLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGET
VYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVV
GQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSI
RKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAG
YGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEG
FSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSR
WEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEI
LSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGASA
NSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYCRIRTTKD
EEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKL
KCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTK
IVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPM
VTLSSILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSR
EEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDD
DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETIRKNISKHKY
QSRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAK
EAALEEADLESLDPMTPGPYTPQPPDFYGSNTSISVSHDASVHQDESSLSAVDTLITTPD
KQGTQEVEDADGDLADEEEGSAQQPQASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLS
ESGSDSDMEPSTVRPKQPHVLQENTRMGMDNEESMMSYEGDGGETSHVMEDSNISYGSYE
EPDPKSNTRDTSFSSIGGYEISEEEEEEEQQRCGPSVLSQVHLSEDEEDSEDFHSIAGDS
DLDSDE
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgaggaggaggcggatggcgggcagagcgagcccttctcgctg
gccggtttcctcttcggcaacatcaatgaggcgggggaatccaagaagcacctggccggc
ctgggtgtgctggggctgggcaacctgatcactgagatcacagccagcgaggaggagggc
ccggaggccgatggagcccacctggacgaggaaggctgggttaagagcacagaagatgct
gttgattactcagatatcaatgaagtggcagaagatgagagccgtaggtacaagcaggca
atgggcagcctgcagccagctcgacgaccagatgaagatgaggatgattatgatgctgac
tgtgaagatattgattccaagttgatgccaccaccaccaccccctccagtacctggaaag
aaagaagatgagaaggatgcaactgccactgtatctgaagatggagacggtatcattttg
ccctccatcattgctccttcctctgctgcctccgacaaggtggatttcaccagcagctct
gattctgagtcagaggtgggacctcaagaagccaggcaggcagaatccaaggaaggcaaa
ctcacacttcctcttgcaggaatcatgcagcgagatgctaccaaacagttgccaagtgtt
acagagctcttcccggaatttcgaccaggcaaggtgctgcgtttcctgcgtctctttggc
cctggaaagaacgtgccgtcggtttggcgcagtgcccggaggaaacgcaagaagaagcat
cgggagttggcacaagaagtgcacgtgcaggagggtgaagttgtagttgagagtggaatg
gaaggaaaatctccttgggaatatgagtttgctgctcctccccctcctgagcagtgcctt
tcagatgatgagattaccatgatggcacctgtggaatcgaaattttcccagtcaactggt
gacatagacaaagtgacagatacgaagcccaaggtggccgagtggcgctatggcccagca
cagctctggtatgacatgctggggatccctgaagatggcagtggatttgattatggtttc
aagttgaaagagaagacagagcaggaggttaaaggacacacagatgagggggtgagaggg
gaactgcgggggaagaaggatgatctgctagctgatgagcacttccttatggtgacacag
ctccaatgggaagatgatgttatctggaatggagatgatgtcaagcataaagggactaag
acacaacgggcaagtttggcaggctggctgccatccagcatgactagaaatgctactgca
tacaatgcccaacaaggattctaccctgtgactgttgcagtttccctggatgaagacaag
ccctggtactctattttcccaattgataatgaagagttggtatatggccgttgggaagac
aatatcatctgggatgatcaggcaatggaaacctacttggatccccctgtcttaacactt
gatccaaatgatgaaaacataattctagaaattcctgatgaaaaggaagaaatgactttg
aactctccatccaaggagaacaagaaagaatcttctctaaagaaaagtcgaatcctgttg
ggaaaaacaggtgtcatcaaagaagagccacagcagaacatgtctcagccagaggtgaag
gatccctggaacctctccaatgatgagttttactaccccaaacagcagggacttcgagga
acctttggaggaaacatcattcagcactctatcccagcagtggaacttcgccagcccttc
tttcccacccatatgggtcctatgaagctccgacaattccatcggcctcccctgaagaaa
tactcctttggtgccctgtctcaaccaggccctcatgctgtgcaacctctgctgaagcac
ataaaaaagaaagccaagatgagggagcaggagcgtcaggcgtctggtgggggtgaaatg
ttcttcatgcgcacaccacaggacctgactgggaaggatggagatctcatccttgctgaa
tacagtgaggaaaacgcccctttaatgatgcaggttggcatggcaacaaagattaaaaat
tactacaaaaggaaacctggcaaagatccgggagctccagactgtaaatatggagagact
gtttactgtcacacttctcccttcctgggttctctgcatccaggccagctactgcaggca
tttgaaaacaaccttttccgggcccctatctatttacataagatgcctgaaacagatttc
ttgattatccggacacgacaaggctattatgttcgggaactagtggatatttttgtagtg
gggcaggagtgcccactttatgaagtaccaggtcccaactctaaacgagccaacacccat
atcagagatttcctgcaggtgtttatttatcgcctcttctggaagagccgtgaccgtccc
cggagaatccgcatggaggacatcaagaaggcctttccctcccactcggagagtagcatc
cggaagaggctgaagctgtgtgctgatttcaaacgcacagggatggactcaaattggtgg
gtgttaaagccagatttcagattgccaacagaggaggagatcagagcaatggtatcccca
gaacagtgttgtgcttattacagcatgattgcagctgagcagcgactgaaggatgcaggt
tatggggagaaatctttctttgcaccagaagaggagaatgaggaggatttccaaatgaag
attgatgatgaggtgcgcacagctccgtggaacaccacacgagccttcattgctgctatg
aagggcaagtgcctcctcgaagtgacaggtgtagcagatcctactggttgtggtgaaggt
ttttcttacgtgaagattcccaacaaacctactcagcagaaggatgacaaagagcctcag
ccagtgaaaaagacagtgacagggacagatgcagatctgcgccgactgtctctcaaaaat
gccaaacagcttctaaggaagtttggagtacctgaagaggagataaagaagctgtcccgc
tgggaggtgatcgatgtggtgaggacaatgtctacagagcaggctcgttcaggggaaggt
cctatgagcaaatttgcacgtggatcccggttttctgtagcagaacatcaagaaagatac
aaagaagagtgtcagcgcatttttgatttacagaataaggttctggaatccactgagatc
ctgtcaacagacacagatagcagctccgctgaagacagtgactttgaagagatgggaaag
aatattgagaatatgttacagaacaagaaaactagttctcagctctctcgggaaagagaa
gagcaggaacgaaaggaattgcaaaggatgcttctgggggaagacagtggagcctcagca
aactctcacaaagatgatgacactgcctctgtaaccagcctcaattcctctgccactggc
cgccgcctcaagatctatcgcaccttcagggatgaggatgggaaggaatatgtgaggtgt
gagactgtgcggaaacctgccgtcatcgatgcctactgccgcatacggaccaccaaggat
gaagagttcatacggaagtttgctctgtttgatgagcagcaccgtgaggagatgcggaag
gagcgacgcaggatccaggagcaattacggcggttaaaacggaaccaagagaaagagaaa
ctcaagggccctccagaaaagaagcccaagaaaatgaaagagcgtccagacttgaaacta
aaatgtggagcatgtggtgcaattggccacatgaggacaaataagttctgccctctttac
taccaaacaaatgccccaccttctaatcctgttgcaatgacagaggagcaagaggaagag
ctggaaaaaacagtcattcacaatgataatgaagagctcatcaaagtagaaggaactaaa
attgtcttgggaaagcaactgattgagagtgcggatgaagttcgcaggaaatccctggtc
ctgaagttccctaaacagcaacttcctccaaagaagaagcgacgagtcgggacaaccgtt
cactgtgactacctgaaccgtcctcataaatccatccaccgccggcgaacggatcccatg
gtcaccctgtcatccatcttggagggcatcatcaatgacataagggatcttccaaataca
taccccttccatacacctgtcaatccaaaagttgtcaaagattattacaagatcatcact
cgacccatggatttacagaccctgcgtgagaacgtcaggaagaggcagtacccatcccgg
gaagagttcagggaacatctggagctcattgttaagaacagtgcaacatacaatggacca
aagcactcactgacacagatatctcagtccatgctggacctgtgtgatgaaaagctaaaa
gagaaggaagataaactggctcgattagaaaaagcaattaatcccctcctggatgatgat
gatcaagtggccttttccttcattttggataacattgtcactcaaaagatgatggcagtt
ccagattcttggccttttcatcatccagttaacaagaagtttgttcctgattattacaag
gtgattgctaatccaatggatctggagactattcgcaagaatatctccaagcacaaatac
cagagcagagaaactttcctggatgatgttaacctcatccttgccaacagcattaagtat
aatgggccagacagtcagtacacaaaaacagcccaggagattgtaaacatctgctaccaa
actttagctgagtatgatgagcacctgactcaacttgagagagacatctctaccgctaag
gaagcagcactagaggaggcagatttggagagtcttgatcctatgactcctggtccctac
actccacagccacctgatttctatggttccaacacgtccatcagtgtgtcacatgatgct
tcagtccatcaggatgagagcagtttatctgctgtagacactctcatcactaccccagac
aagcaaggaactcaggaagttgaagatgcagatggtgacctcgctgatgaagaagaagga
tcagcccagcagccccaggccagtgtcctttatgaagatctgctcatgtcagatggagaa
gatgatgatgatgggagtgatgaagaaggagataatcctttctcatccatccagctgagt
gagagtggcagtgactctgacatggagcccagcacagtgaggcctaaacaacctcatgtt
cttcaagagaacacacggatgggcatggacaatgaagaaagcatgatgtcctatgaagga
gatggtggggagacatctcatgtaatggaggacagcaatatcagttatggcagctacgaa
gagccagaccccaaatccaacaccagagataccagtttcagcagcattggagggtatgag
atctcggaggaggaggaagaggaggaacagcagcgctgtgggcccagtgtcctgagccag
gtgcatctgtctgaggatgaggaagacagtgaggacttccactccattgcaggagacagt
gacctggactctgatgagtaa
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integrated database retrieval system
