Chaetura pelagica (chimney swift): 104389899
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Entry
104389899 CDS
T08631
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104389899 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
104389899
NCBI-ProteinID:
XP_009997259
LinkDB
All DBs
Position
Unknown
AA seq
2594 aa
AA seq
DB search
MRSLPVSITWWVGTAAPISPGCADLGCSRGLGKPVLGPGDTWGVQLPPLPPGSCSVANPV
PLSAGLRCTQLAESCLNGGKCETFLNGTEVCQCSSSYVGERCQLPNPCLSSPCKNAGTCT
PVVRGSTVDYTCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDPLTXXXXRCRCPPGWSG
KTCQQADPCASNPCANGGQCVPFEAHYICSCTAGFHGANCKQDVNECNISPPLCKNGGSC
TNEGGTYQCFCKPADTGKNCEHLYVPCNPSPCQNGGTCRQIGDTTYDCTCLPGFTGQNCE
ENIDDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNN
HGGYNCVCVNGWTGEDCSENIDDCARAPCFHGATCHDRVASFYCECPHGRTGLLCHLDDA
CISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGANPCEHAGKCINTQGS
FQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECA
SSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCRNGAKCVDGPNTYSCECS
EGFTGAHCEIDIDECNPDPCHYGTCKDSIAAFTCLCQPGYTGHRCDININECQSQPCKNG
GTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKINGYECTCEPGYTGRMC
NINIDECSSNPCHNGGTCKDGINGFTCLCPEGFHDPNCLSEVNECNSNPCIHGKCHDGLN
GYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCREGFSGPNCQTNINEC
ASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKNGGECRESEDYESFSC
SCPSGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFTGRNCDTDIDDCKPNP
CHNGGSCSDGIGMFFCECLAGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCPSGF
SGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPAGFTGSYCEHNINECDSKPCLNGGT
CQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNLYRCECNSGWTGLYCD
VPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQ
NGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQG
VHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFVGERCEGDVNECLSNP
CDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGGTCAVASNTGRGFICK
CPPGFVGATCENDSRTCGNLHCLNGGTCISSHKSSKCMCTPAFTGPECQYPASSPCTSNP
CYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDIIPPKIEEKCEIAVCA
GYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYFNDGKCDSQCNNAGCL
YDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLDCANNMPEKLADGTLV
VVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYYGNEEELKKHYIKRST
EDWSDMPSAVINKVKSSLYSRAGKRRKRELDQMDIRGSIVYLEIDNRQCIQSSSQCFQSA
TDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLFPMYVVGVVLVLLAFFGVGVLV
SRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASDGTLMDDNQNEWGDE
ETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAPTPPQGEIDADCMDVN
VRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASLHNQTDRTGETALHLA
ARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG
TTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNNVEAAVVLLKNGANKD
MQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE
YNLVRSPPLHSGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKPSTKGLSCNGKDAKDL
KARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTSPFQQSPSMPLNHLPG
MPDAHMSINHLNMAGKQDMAMGNSSRMAFDAVPPRLSHLPVSSPSTVMSSAPMNFSVSGA
AGLNGQCDWLTRLQNGMVQSQYNPMRGNMQPGAHQQTPQNLQHGMMTSLHNGLPTTSLSQ
MMSYQAMPNTRLASQPHLMQSQQLQQMQQQQLQQQNMQPQQPPPQPQQQPQQQQQQHHNP
SSNTSSHMGQNFLGTELSQPEMQPVSSSTMAVHTILPQDSQMLPTSLPSSLAQPMTTTQF
LTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSEGISSPPT
SMQSQMGHIPEAFK
NT seq
7785 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccctgcccgtctccatcacctggtgggtggggactgcagcccccatctcacca
ggctgtgcagacctggggtgctctagggggcttggcaagcctgtccttggtcctggtgac
acttggggggtgcagctccccccgctgccacccgggagctgctctgtggctaaccctgtc
cctctgtctgcaggtttacggtgcacgcagctcgccgagtcctgcctcaacgggggcaag
tgcgaaacttttctcaacgggacagaagtgtgccagtgtagcagttcctacgtgggcgag
cggtgccagctgcccaacccctgcctgagctccccttgcaagaacgccggcacctgcacc
ccggtggtgcgcggcagcaccgtggactacacctgtgcctgccgcctgggcttcaccgac
gagctgtgcctgacgccccgcgacaacgtctgcctcagcaacccctgccgcaacgggggc
acctgcgacccgctgacnnnnnnnnnnnncaggtgccgctgcccgccggggtggtcaggc
aaaacgtgccagcaggctgacccctgtgcctccaacccctgcgccaacgggggccagtgc
gtccccttcgaagcccactacatctgcagctgcaccgccggcttccatggggccaactgc
aagcaggacgtcaacgagtgcaacatctctcccccgctctgtaagaatggcgggagctgc
accaacgaggggggcacctaccagtgcttctgcaagccagcngacactgggaagaactgc
gagcacctctacgtgccctgcaatccctcgccctgccagaacggggggacctgccgccag
atcggggacaccacctacgattgcacatgcctgccagggttcacaggccagaactgtgag
gagaacatcgacgactgtccaggcaacaactgcaagaatgggggaacctgcgtggatggt
gtcaacacctacaactgtcagtgcccgcccgagtggacaggtcagtactgcactgaggat
gtggatgagtgccagctgatgcccaatgcctgccagaatgggggcacctgccacaacaac
cacggtggctacaactgcgtctgcgtcaacggctggacgggcgaggactgcagtgagaac
attgatgactgtgccagggctccctgcttccatggggccacctgccatgaccgggtagcc
tccttctactgcgagtgcccccacggccgcacaggtttgctctgccacctcgatgatgcc
tgcatcagcaacccgtgcaatgagggctccaactgtgacaccaaccctgtcaatggtaaa
gccatctgcacgtgtccttcagggtacatggggccagcctgcaaccaggacgtggacgag
tgctcgctgggagccaacccttgtgaacatgcagggaagtgcatcaacacccaggggtcc
ttccagtgccagtgcctgcagggctactcgggccctcgctgtgagattgatgtcaatgag
tgcctctccaacccctgccagaatgatgccacctgcctggaccagatcggagagttccaa
tgcatctgcatgccgggttacgagggggtttactgcgagatcaacacggacgagtgtgcc
agcagcccctgcctgcacaacggcaactgcctcgacaagatcaatgagttccactgcgag
tgccccaccggcttcaacgggcacctgtgccagtttgacatcgatgagtgcgccagcacc
ccctgcaggaacggcgccaagtgcgtggacggccccaacacctacagctgcgagtgctcc
gaaggtttcactggtgctcactgcgagatagacatcgacgagtgcaaccccgacccatgc
cactatgggacctgcaaggacagcattgctgccttcacctgcctctgccagcctggctac
acgggccaccgctgtgacatcaacatcaacgagtgccaaagccagccctgcaaaaatggg
gggacctgccaggacaggaacaacgcctacaactgcctctgcctcaaagggaccacgggt
cccaactgtgagatcaatctggacgactgcgccagcaacccctgtgactatggcaagtgc
attgacaagatcaatggctacgagtgcacctgtgaaccagggtacacaggacgcatgtgc
aacatcaacatcgacgagtgctccagcaacccctgccacaatgggggcacgtgcaaggat
ggcatcaacggcttcacctgcctctgccctgagggcttccatgatcccaactgcctgtct
gaagtgaacgagtgcaacagcaatccctgcatccatgggaaatgccacgatggcctgaat
ggctacaggtgtgattgtgacccaggctggagtgggacaaactgcgacattaacaataat
gagtgtgaatccaatccctgcatgaatggtggtacctgcaaggacatgaccagtggctac
atctgcacctgcagggagggcttcagtggacccaactgtcaaaccaacatcaacgaatgt
gcttccaacccctgcctgaaccagggcacctgcattgatgatgtcgctggctacacctgc
aactgcctcctgccctacacaggagccacctgtgaggatgtgctggccccctgtgctggc
agcccctgcaagaacggcggcgagtgccgggagtcagaggactacgaaagcttctcctgc
agttgtccctccggctggcaaggccagacctgtgagatcgacatcaacgagtgtgtgaag
agcccctgccgcaacggggccacgtgccagaacaccaacgggagctaccgctgcgcctgc
aggaccggcttcaccggccgcaactgcgacaccgacatcgacgactgcaaacccaatcca
tgccacaacggtggctcctgctctgatggcattggcatgttcttctgtgagtgcctggct
ggcttccgtgggcccaagtgtgaggaggacatcaatgagtgtgccagcaatccctgcaag
aacggtgccaactgcaccgactgtgtcaatagctacacctgcacctgcccctccggcttc
agcggcatccactgcgagaacaacacccctgactgcacagagagctcttgcttcaatggt
gggacctgcgtggatggcatcaacaccttcacctgcctctgtccagctggcttcacgggc
agctactgtgagcacaacattaacgagtgtgactccaagccatgcctgaatggaggcaca
tgtcaggacagctatgggacatacaagtgcacttgtccccagggatacaccgggctcaac
tgccagaacttggtgcgttggtgtgactcctctccctgcaaaaacggcggcaagtgctgg
cagaccaacaacctgtaccgctgcgagtgcaacagcggctggacggggctctactgcgat
gtccccagtgtctcctgcgaggtggctgctaagcagcaaggtatcgatgtcgcacatctg
tgcaggaattcagggctctgtgtggacactggcaacactcacttctgccgctgccaggct
ggctacaccggcagctactgtgaggagcaggtggacgagtgctcccccaacccctgccag
aatggagccacctgcactgactacctgggaggctactcctgtgagtgcgtggctggttat
catggagttaactgctcagaggagatcaatgagtgcttgtcccacccatgccagaatgga
ggaacctgcatcgatctcatcaatacctacaaatgctcctgccccagaggaactcaaggg
gtgcactgtgagatcaatgtggatgactgcagccctttctttgatcctgtcaccctgggg
cccaagtgctttaacaatggcaagtgcacggatcgggtaggtggctacagctgcatctgc
ccccctggctttgtaggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccc
tgcgacgcccgcggcacccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgc
cgacctggctatgcaggccgccgctgtgacaccgtggtggatggctgcaaaggcaaaccc
tgcaggaacggtggaacctgcgcagttgccagcaacaccggtcgtggcttcatctgcaaa
tgtcccccgggcttcgtgggtgccacctgtgagaacgactcccgcacctgcgggaaccta
cactgcctgaatggtggcacctgcatctccagccacaagagctccaagtgcatgtgcaca
ccagccttcacgggtcccgaatgccagtacccggccagcagcccctgcacgtccaacccc
tgctacaacgggggcacctgcgagttcttcagcgatgcctccccctactaccgctgcaac
tgccccgccaacttcaatggcctcaactgccacatcctcgactttgatttccaaggtggg
atcgggcaggatatcatcccacccaagattgaggagaagtgtgagatcgcggtttgcgcg
ggctatgctggcaacaagatctgcgatgggaaatgcaacaaccacgcctgtggctgggac
gggggcgactgctccctcaacttcaacgacccctggaagaactgctcccagtccctgcag
tgctggaagtacttcaacgatggcaagtgtgactctcagtgcaacaatgcgggctgcctc
tacgatggatttgactgccagaagtacgaagggcagtgcaaccctctgtatgatcagtac
tgcaaagaccacttctcagatggccactgtgaccagggctgcaataattttgagtgtgaa
tgggatgggctggactgtgcaaacaacatgccagagaagcttgcagatggcacgctggtg
gtggtggtcctcatcactcctgagaacctgaagaacaactctttcaacttcctgcgggag
ctgagccgcgtgctccacaccaacgtggtcttcaagaagaaccccaagggggagtatatg
atcttcccatactatggcaatgaggaggagctgaaaaagcattacatcaagaggtcaaca
gaggactggtcagatatgcctagtgctgtcatcaacaaagtaaagagcagcctttactcc
agagctggcaaaaggcggaagagagagcttgatcagatggacatcagaggatccattgtc
tacttggaaattgataaccgccagtgcatccagtcatcttcccagtgcttccagagtgca
actgatgtggcagcattcctgggtgccttggcctcccttggcaacttgaacataccctac
aaaatagaagctgttaaaagtgaaacagctgagcccacgaagaactcccagctctttcct
atgtacgtggtgggggttgtgctggtcttgctcgctttctttggagtgggagtgctggtg
tctcggaagcggcgcagggagcatgggcagctttggttcccagaaggcttcaaagtgaca
gagtcgagcaagaagaagcgacgagaaccactcggggaggattctgttgggctgaaacct
ctcaaaaatgcttcagatggcacactgatggatgacaaccaaaatgagtggggtgatgag
gagaccttggacacgaagaagttcaggttcgaggagcaggcgatgctgcctgacacggac
gaccagacggatcacaggcagtggacccagcagcacctggacgccgctgacctgcgcatt
tcgtccatggctcccactcctccgcagggggagattgatgcagactgcatggatgtcaat
gtcagggggcctgacggcttcaccccgctgatgatcgcctcgtgcagcggaggagggctg
gagaccggcaacagcgaggaggaggacgatgctcctgctgtcatctcagatttcatctac
cagggtgccagcctccacaaccagaccgaccgcacgggcgagaccgcgctccacctggcc
gcccgctactcgcgctccgacgccgccaagcgcctgctggaggccagtgccgatgccaac
atccaggacaacatgggcaggacgcccctccacgccgctgtctctgccgatgcccaggga
gtcttccagatcctgattaggaacagggcaaccgacctcgacgcccggatgcacgatggg
accactcctctgatcctggctgctcgcctggctgtggagggcatgctggatgatctcatc
aactgccacgcagatgtcaatgctgtggatgacctaggcaagtcagcactgcactgggca
gctgctgtcaacaatgttgaagctgcagttgtcctcctgaagaatggtgccaataaggat
atgcagaacaataaggaggagactccactgttcctggcagccagagaagggagctacgaa
actgccaaggtcctgctggaccattttgccaaccgcgacatcacggaccacatggaccgg
ctgccgcgggacatcgcccaggagcgcatgcaccacgacatcgtcaggctgctggacgag
tacaacctggtgcggagcccacccctgcacagcggcccgctgggggcacccacgctgtcc
ccacccctctgctctcccaacagctacattggcaacctgaaacctgccgtccagggcaag
aaggccaggaagcccagcaccaagggcctgagctgcaacggcaaggacgccaaagacctc
aaagcccggaggaaaaaatcccaagatggaaaaggatgtctgcttgacaactccagcgtg
ttgtctccagtggactccctggagtcgccccatgggtacctgtcagatgtcgcctctcca
ccactgatgacctctccgtttcagcagtccccttccatgcctctgaatcacctgccaggc
atgcctgatgcccacatgagcatcaatcacctgaacatggcggggaagcaggatatggcc
atggggaactccagcaggatggccttcgatgcggtgccgccgcgtctctcccacctcccc
gtctccagccccagcaccgtgatgagcagcgccccgatgaatttctcggtcagtggagca
gccgggctgaatgggcagtgtgactggctgaccaggctgcagaacgggatggtccagagc
cagtacaaccccatgagaggcaacatgcaaccaggggcgcatcagcagacgccccaaaac
ctgcaacacggcatgatgacctccctgcacaatggcttgcccaccacaagcttgtcgcag
atgatgagctaccaggccatgcccaacacccggctggcttcccagcctcacctgatgcag
agccagcagctccagcagatgcagcagcagcagctccagcagcaaaacatgcagccccag
cagccgccgccgcagccccagcagcagccccagcagcagcagcagcagcaccacaacccc
agctccaacaccagcagccacatgggccagaatttccttggtactgagctgagccagccc
gagatgcagccggtgagcagcagtaccatggcagtccacaccatcctgcctcaagattcc
cagatgctgcccacatctctgccatcctccctcgcccaacccatgaccaccactcagttt
ctaactccaccttcccagcacagttattcctcccccttggacaacactcccagccaccag
ctccaggtgcctgaccaccctttcctaacgccgtctccggagtctccggaccagtggtcc
agctcatctcctcactccaacgtgtccgactggtctgagggcatctccagccctcccacc
agcatgcagtcacagatgggacacatccctgaagccttcaagtag
DBGET
integrated database retrieval system
