Chaetura pelagica (chimney swift): 104393763
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Entry
104393763 CDS
T08631
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104393763 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpea01001
]
104393763 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpea04054
]
104393763 (CIITA)
Enzymes [BR:
cpea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104393763 (CIITA)
Protein kinases [BR:
cpea01001
]
Serine/threonine kinases: Other
TAF1 family
104393763 (CIITA)
Pattern recognition receptors [BR:
cpea04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104393763 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Silic_transp
NB-ARC
Motif
Other DBs
NCBI-GeneID:
104393763
NCBI-ProteinID:
XP_010001585
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MNLFKEILPRVRKILSTATSSDDHKLLNLMLKEDVISKEYHQALLNEKDKEDLARKISLT
FVEKWDMCLNTLVPFCCLNVCGSGSKPQNITDNGPTGSNYISDSKRQIMDSAFLPENGYL
AMLHGDLDLLHTFLDAKPPGDEEGDFFPVLDPEVDDSNCEQSNNMDFLYAKESDENGEEL
YVCSNTIEAYARIAGLAEYVLKDQQEKHMEDIFAGSLILDEMAAENTEKFTDIEMQKCHK
RTFLSSSESCSDASVPKYRKTVEAPAVSAGNGSFLAMPLSSHPATSASLSNQHMSFSLPA
TNELERSSIIPGRYTPLSPECLPVGVKGSQENTGFADPPQQIFNLVLGNGYSDVIIYPVL
TSSTETLIYPSFPVNLCSSELFKEIPVTIIPYKEPFKRPKPVEAFCASLVDYFRDMCKYV
AMEREVTLDHLFIGGTLVQSQPETKTGKNSTKAMEKELVTCSLQGKEETALKRNQIFQIP
EGKHIETKVILVLGKAGIVGMGKSMLVQKICQDWSNGEFSQFEFVFWFDYKQISLPEKKY
SLKDLLLEFFVKPQESSKEIFEYILQNPAKVLLIFDGFEGLHVHENFPYCSASQPEKDLC
SVKELLSGLIQKKILKGCTLLLTARPKDKVYQYVSKVDKTIEIVGFSPQQRELYITKYFE
GLPYCDNALKLIKDSGYLFSHCYSPVMCRFVCFLCETVLERGDQNLPSTLSRIFLKFVQQ
KIIHMQTDVTAMQNQESLATLARIAWYLGEKHQSAMKSDLLPSKKVKEFALKYGFFLPFA
FPRHSDSGEEEFGSTFSDFIIQNFLGALHLMLPEEIKDKSLTKYLSFLSKKKKLYSWLDL
VPRFLAGLLFLQDDPYFCSLSSKDVKHSIKKQKKFLKYIRRLKMNKLCPERLLELLHCIY
ETQNNYLLQHVALRLKPDLSFLDVGLTPPDVHVVHSILKRSRKEFSLDLRNSSIDMQGLK
DLIGLKNVASFRASLSDAVRLWKSLEQTKDYELLRASTEKFVLGPFKAKTMKDISDLSDL
VEVQKMISCVQEASGCSSYEIPAIKNLQKLEFALGPVCGLQGLLKLVEILAAFPSLQHLE
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctttaaggagatactgcccagagtaaggaagattctttcaactgctacatct
tctgatgaccacaaattgcttaacctcatgctgaaagaagatgtgatctccaaggagtac
catcaagccttgctcaatgaaaaagataaagaggaccttgcaaggaaaatatctctgaca
tttgtggaaaaatgggacatgtgcttgaacactttggttcccttctgttgtttaaacgtc
tgtggcagtggcagtaagcctcaaaacattacagacaatgggccaacaggaagcaattac
atttctgacagcaagagacaaatcatggattcagcttttttgcctgaaaatggctatctt
gctatgctgcatggtgatcttgatctattgcatacttttcttgatgctaagccacctgga
gatgaggaaggggacttctttccagttctggatcctgaagttgatgacagcaactgtgag
cagtccaataatatggatttcctgtatgcaaaggaaagtgatgaaaatggggaagaattg
tatgtctgttccaacaccatagaagcctatgctagaatagctggattagcagaatatgtg
ctaaaagatcagcaagagaagcacatggaagacatttttgcagggagccttattttggat
gaaatggctgctgaaaacactgagaaatttactgacatagagatgcagaaatgtcacaaa
cgaaccttcttgagctcttcagagagttgctctgatgcttcagtacccaaatacaggaaa
actgtggaagcccctgcagtgtctgcaggaaatggcagtttcttagctatgcctctcagc
agccatccagctacctctgcctcactatccaaccagcacatgtccttttctcttcctgct
accaacgagttggagaggagttccataatccctggtaggtacacacccttgagtccagag
tgtctacctgtcggtgtgaaaggaagccaagagaatacaggatttgcagatcctcctcag
cagatatttaacttggttcttggaaatggctattctgatgttataatatatccagtgctg
acttcttccacagaaacattgatatatccaagttttccagttaatttatgtagttcagaa
ctgttcaaagagatcccagttaccatcattccttacaaagaacctttcaaaagaccaaag
ccagtggaagctttctgtgcatcactcgtggattatttcagagatatgtgcaaatatgtg
gccatggagcgtgaagtaactcttgatcacctgtttattggtggaacacttgttcaaagc
caacctgaaaccaagactgggaagaatagcacaaaagcaatggaaaaggaactggtaacc
tgcagtctgcaaggaaaggaagagacagcccttaaaagaaaccaaatatttcaaatccca
gaaggtaaacacatagagactaaagtgattttggtgctgggaaaagcaggaatagttgga
atgggcaaaagcatgcttgttcagaagatctgccaagactggtccaatggagagttttct
cagtttgaatttgttttttggtttgactacaaacaaataagcttgcctgagaagaaatac
agcctgaaggatctgctgcttgaattttttgtaaaacctcaagagagtagcaaagagatc
tttgagtatatattgcaaaatcctgctaaagtccttctgatttttgatggttttgaaggg
ttgcatgttcatgagaattttccttattgctcagccagccagcctgaaaaagacttgtgc
agtgtaaaggagctgctttcaggactcatccaaaaaaagatactgaagggttgtacttta
ttacttacagcaagaccaaaagacaaggtgtaccagtatgtgtccaaagtggataagact
attgaaatagtaggattttcccctcagcagagagaactgtacataaccaaatactttgaa
ggattaccctactgtgataatgcactgaaattgatcaaagactctgggtacttgttcagt
cattgttacagccctgttatgtgtagatttgtttgttttctctgtgagacagttcttgaa
aggggagaccaaaaccttccttcaactctttctagaatcttcctgaaatttgttcagcaa
aagataatacatatgcaaacagatgttacagccatgcaaaatcaagagagtcttgctaca
ctagcccgtatagcctggtatcttggagaaaagcaccaaagtgccatgaaaagtgatctt
cttccttctaagaaagttaaagagtttgctctgaaatacggatttttcctgccatttgca
ttccccagacattcagatagtggagaagaggaatttgggagcacattctctgatttcata
attcagaatttcttgggtgcgcttcaccttatgctgccagaagagatcaaggataaaagt
ctaaccaagtacctgtcttttctatccaagaagaaaaaactttatagctggttagattta
gtgcctcgatttttggctggtttgttgttcctccaggatgacccctacttctgctccctt
tcaagtaaggatgtaaaacattcaatcaagaagcagaaaaaattcttgaaatatattaga
agactgaagatgaacaagctctgtccggagaggttacttgagcttttacattgtatttat
gaaacacaaaacaattatctcttgcagcatgtggccttaaggctcaaaccagacctgtct
tttctggacgtaggtcttacaccacctgatgtccatgtagtgcactctattttaaaaagg
tcaagaaaagagttttccttggatttgcgaaacagcagcattgacatgcaagggctaaaa
gacttgattggcttaaagaacgtggcatcattcagggcctccctcagtgatgcagtcagg
ctctggaaatctttagaacagacaaaagactacgagctgctcagagcatcaacagagaaa
tttgttcttggcccctttaaggcaaagacaatgaaggacatcagtgacctttcagacctt
gtagaggtgcagaagatgattagctgtgtgcaagaggcatctggttgcagcagctatgaa
attcctgccatcaaaaaccttcaaaaactagaatttgcgctaggtccagtgtgtggcctt
cagggactcctaaaacttgtggaaatcctggcagcattcccatcacttcaacatttagag
tga
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