Chaetura pelagica (chimney swift): 104398297
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Entry
104398297 CDS
T08631
Symbol
REV3L
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104398297 (REV3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104398297 (REV3L)
Enzymes [BR:
cpea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104398297 (REV3L)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
104398297 (REV3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
104398297
NCBI-ProteinID:
XP_010006692
LinkDB
All DBs
Position
Unknown
AA seq
3124 aa
AA seq
DB search
MSSTGQKTCLHLHGIFPYLYVPYDGFGQHPEYYLRQVAFSIDRALNVALGNPSSTVQHVF
KVSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLLQ
LFIDYNLYGMNLINLAAVKFRKARRKSDTSGVSKRHRIHLTENSSSASFIEWEEDEIPSS
LMLNGVEPQSTCELEVDAVAADILNQLDIEAQIGRNPGLQAIWEDEKQRRRQKCESSQIK
TPESQDRGFVPATESEKFFQKRLKEILKQNDFSVTLSGSVDYSNGSEEFSAELTLHSEVL
SPEAFQCTPANMVEVHKDKKVNKGDKMHTDKEEEAVINEEAILNIVENSQSFQSLSQRLS
QTTVFMDSGADEAMIDLLAGLENDGFQMGHHKTLSHHRSLGNCRNSQNSDDEENEPQREK
EEMELSLVMSQRWDSSTEEPGPKRRSAGKNTHRSSTEEDSSSEEEMEWSGNNVLLSNLSI
PQLDGTADENGDNPLNNESSRTHSSVVATSKMSVKTSIFHKDAATLEPPSSAKITFQCKH
TSALSNHVLNNEDLVEDLSQPNTETRPELSVHSLTKENTYSAKYPTPFSNSTHTENSHKE
SNKKDNLPVTSCENNIFEYEDDISSVSRQIPSRKYTSIRKAEKDVSFMHVGRHIGDSMLN
KNLFNFSDLSHSSHSKGKMSSEVNEKSSSASINSFFPATVTENCELVSCSGGSRTVVHSL
ENNTDEGGLNKLKIRYEEFQEHKAEKPSLSQQAAHYMFFPSVVLSNCLSRPQKLAPVTYK
LQQGNKQSRLKLNKKKHSFINHQEPAGVNDVASVKESCYSQGNACSNLPDKDSALPSDLV
PPEAFENKMPTSTANYTDCQFADGSLESEQSFGLCGNKYTLRTKRKVNYEPEDSESSFVT
HNSRINLPQPMESVESLEGSQKSRKRRKLSKKLPPVIIKYIIINRFRGRKNMLVKLGKVD
SSEERVVLTEEKMNLYRKLAPLKDFWPKVPDSPATKYPIYPLTPKKSHRRKAKHKSTKKK
SGKPQKTGSRNIKRTLSFRKRTHTILSPPSPSYNAEAEDCDCNYSDVMSKLGFLSERSTS
PVNTSPPRCWSPTDPKAEEIITNLDREALFSRGPSMYNSKTVNASVGKNSRAKTQFKKCK
KKFAGPAVSTKKKRKMNQADKTADDGKKKPRTKQRQKATEKASSRKRVVFTDEKGSARPA
AEVKFVLKRQDLPEVSYSSVTSQPLPHRKDGPGCSAGYLPSAQLPSAPESRGNSSGCFHS
LMDIDNPVDAQGLPAPREDPHSSLASTPVPAGREVPKMSSQRPRTQNAVFRMKDSAVIPN
VFDPANHSTQVTQNAHISKDKTAAKAEERKNSQNRYLPPSGKLNEARDPLDTTKMDHLHA
TNYLHCKDSNQQQIFCLPEASKHSDPCSSILKSSEESPGPLQLPKNCFVTSLKSPVKQLN
WDQNQRGFVLDMSHFKPETVKQRSLSETTTQPKPISQYKNRTIVAPSAFSEGQSGLAVLK
ELLQKRQQKAQSANVAQEPLPAKPQLSGSVPCPLEPNKGIKRSRSVMSPRKSRAPRNTKP
KEKTPKLSKMESLSQQITSCVDHSVSDGSPVFFSDPGFESCYSLEDSLSPDHNYNFDINT
LGQTGFCSFYSASQFVPADQNLPQKFLSDAVQDLGSGQTAENDLLGHSDQKSEEENQHSS
STSKWIRSGAMSPDLFEKSSLDNTENHCHSQRRKNVHPSTARPTSGDTSCTQEAEVCLNE
KFRLNRNTVNKERFLNLPQPTSSDWIQSHIRKETTFEPCQPLDSVSTSFTLILSSPDGEL
IDAASEDLELYVSRNNEALTPTPDSSPRSTSSPSQSKNGSFTPRTAHILKPLMSPPSREE
IMATLLDHDLAETIYQEPFCSNPSDAPEKPREIGGRVLTVETRLPNDLLEFEGDFSLEGL
RLWKTAFSAMTESPRPGSPPRYGHPTVNKRERNSHKTSVDKKIVIMPCKCAPSQQQVQIW
LHAKEEYEHFKKLPKNHPAEPAKAEDSSSAVLSEEKSTEVVKASKDLNLSSLEDERPVVP
TKNSPASVAEATKTQTKETCDKSRSTIGTCINTKNEIDSSKTPSESKTVITSTLENEKEE
EEEDYYVNYSSPDSPVLPPWQQVASPDPKQTSLEDTDWKSQDIILSSAEGNDVVPVGSAQ
NSPSTQEDVRTSFDTSPFPVNEDPGNSEAVCLHSTPIAQRKNQVGIPEVLGFTPLSTEPK
AQKLSHKRGNHTDGLRRVLLTTQMKNQFAALGAPKKETSQIEGPSLNNTYGFKMSVENLQ
EAKSLHEVQHLTLISLELHARTRRDLEPDPEFDPICALFYCISSDTALPNTDKKEITGAI
VIDRDRTLSSQGSRDQAPLLTRSGVTGLEVSYATDETALFQEVVNIVKRYDPDILLGYEV
QMHSWGYLLQRAAALNVALCQMISRVPDEKKENRFAAELDEYGSDTMTEINIVGRITLNV
WRMMRNEVNLLNYTFENVGFHVLHHRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVRG
NLQLLEKLDLIGRTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIAVSPSVQQR
AQMKAPQCIPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDAF
RFGCASLQVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPGMLEEILKTRIMVKQSMKA
YKQDKAITRMLEARQLGLKFIANFTFGYTAAHFSGRMPCTEVGDSIVHKARETLERAIKL
VNDTKKWGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLP
CVLQTKKRYVGYMYETLEQKDPVFDAKGIETVRRDSCPAVSKILECSIKLLFETRDISQI
KQYVQNQCMKLLEGKASMQDFIFAKEYRGSSAYRPGSCVPALEITRRMLSYDRRSEPRVG
ERVPYVIVCGSPRLPLIQLVRRPSQLLQDPSLRLNATYYITKQILPPLARVFSLIGIDVF
SWYQELPRIQKAASAARNELEGRKGTISQYFPTLHCPVCDELTQHGICSSCRSQPQHVAV
ILNQEIRELERKQEQLLKICKNCTGCFDGQIQCVSLSCPVLFKLSRVSRDLSRAPYLRQL
LDQF
NT seq
9375 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacaggtcagaagacttgtctccacttacatggtatcttcccttacctctat
gtaccatacgatggttttggacagcatccagaatattatctccgtcaagtggcattcagc
attgacagagcactgaatgtggctttaggcaatccctcttctactgttcaacatgttttc
aaagtgtcgttggtatctggaatgcctttttatggttaccatgaaaaggagagacagttc
atgaagatttatctttacaatcctgcaatggtaaaaagagtgtgtgagcttctgcaaggt
ggagccataatgaacaaatcttaccagcctcatgaagcccatattccctacctccttcaa
ctctttatagactacaacttatatggaatgaatttaataaacctggctgctgtcaaattc
agaaaggcaaggagaaaaagtgatacatcgggtgtaagtaaacgtcacagaattcatttg
acagagaattcaagtagtgcatctttcattgaatgggaagaagatgaaataccaagctct
ttaatgttgaatggtgttgagccacaaagtacctgtgagttggaggtggatgctgtggct
gctgacattttaaatcaactggatattgaagcccagattggcaggaatcctggtttacaa
gctatatgggaagatgaaaagcagcgacggaggcagaaatgtgaatcctctcagatcaag
acacctgagtcacaagaccgtggatttgtgccagcaacagagagtgaaaagttttttcag
aagagacttaaagaaatcctcaagcaaaatgacttctctgtaacgttgtcaggatcagtg
gactacagtaatggatcagaggagttctctgctgagctaacactacattctgaggtactt
tcccctgaagcctttcagtgtacgccagctaatatggtagaagtgcataaagataaaaag
gtgaacaaaggtgataagatgcatactgataaagaagaggaagcagttattaatgaagaa
gcaattttaaacatcgtggagaatagtcagagctttcagtctttgtctcaaagactgagt
cagactacagtttttatggacagtggtgctgatgaggccatgattgatctgttggctgga
ttggagaacgatggatttcagatgggacatcacaaaaccctttctcaccatcgttctctc
gggaactgtcgaaactctcagaacagcgatgacgaagagaacgagccgcagcgcgagaag
gaggagatggagcttagcttggtcatgtcccagaggtgggacagtagcacagaagagcct
gggccaaaaagaaggtcagctggcaaaaatacacatcgaagttcaacagaagaggattca
tcttcagaggaagaaatggagtggagtggtaacaatgtgctcctaagtaatctctctata
cctcagttagatgggactgcagatgaaaatggtgacaatcctttgaataatgaaagttct
cgaactcactcctccgtcgttgcaacaagcaagatgtctgtgaagacctcaatctttcac
aaagatgctgctacgctagagcccccatcttctgctaaaatcacttttcagtgtaaacac
acaagtgccctttctaaccatgttttgaataatgaagatttagtagaagacctctcacaa
ccaaacacagaaacaagacctgaactttcagtccattctcttacaaaagaaaacacttac
tcagccaagtacccaactccattcagcaatagtacccacacagaaaattctcacaaggag
agtaacaagaaagataatctcccagtaacttcatgtgaaaataatatttttgagtatgaa
gatgacatttcatcagtgagcagacagatacctagtaggaagtatactagtatcagaaag
gctgaaaaagatgtctctttcatgcatgtgggccgccacattggtgacagcatgctgaat
aaaaacttatttaacttttctgacttgagccactcaagccactccaaaggtaaaatgtcc
tctgaagtaaatgaaaaatccagcagtgcaagtataaatagtttctttccagcaacagtt
acagagaattgtgagttggtgtcttgttcaggaggcagtcgaactgtggtacattcgctt
gaaaataacactgatgaaggtggccttaataagcttaaaattaggtatgaagaatttcag
gagcataaggcagaaaagccaagcctcagccaacaagcagcacattatatgttcttccct
agtgttgttctttctaattgtctcagtcgaccacagaagttagctcctgtgacatacaaa
ctgcagcaaggcaacaaacagtccaggttgaagctgaataaaaagaaacatagttttatc
aatcatcaggagcctgcaggtgtgaatgatgttgcatcagtgaaggaaagctgctactca
caaggtaatgcttgtagtaaccttcctgataaggacagtgctttacctagtgacttagtt
cctcctgaggcttttgaaaacaaaatgcctacaagtactgctaattacaccgactgccag
tttgcagatgggtctcttgaaagtgagcagtcatttggattgtgtgggaataaatatacc
ctccggacgaaacggaaggtgaattatgagcctgaagacagtgagtcgagctttgtcaca
cacaactcaagaattaatctacctcagccaatggaaagtgttgaaagtttggaagggtct
cagaagtcacgaaagcgtaggaagctttctaagaaactgccacctgttattatcaaatat
attatcatcaatagatttagagggagaaaaaatatgcttgttaaactagggaaagtagat
tctagtgaggaaagagtagtgctcacagaggaaaagatgaacttatatagaaagcttgca
cctttaaaggacttttggccaaaagttcctgactctcctgcaaccaaatatcctatttat
ccactaacaccaaagaaaagtcacaggaggaaagcaaaacataagtcaaccaagaaaaaa
tctggaaaaccacaaaaaacaggtagtagaaatattaaaagaactttgtctttcagaaaa
aggactcatacaattctttctcctccttcaccatcttacaatgccgaagctgaagactgt
gactgtaactatagtgatgtgatgtccaagttaggttttctttctgagagaagcacaagc
ccagtaaatacgtctcctcctcgctgctggtcacccactgatccaaaagcagaagaaatt
ataactaacctggacagagaagctttatttagtaggggccccagtatgtacaacagcaag
actgttaatgctagtgtngggaaaaatagtcgagcgaaaactcagtttaagaaatgtaaa
aagaaatttgctggccccgctgtatctaccaagaaaaagaggaagatgaatcaggctgat
aaaacagcagatgatgggaagaagaaacctagaacaaagcaaaggcaaaaagcaactgaa
aaagcatcctcaagaaagcgtgttgtgtttacagatgagaagggcagcgctcgcccggct
gcagaggtgaagtttgtgctgaaacgccaagacctgcctgaggtatcctacagctctgtc
acctcacagccacttcctcaccggaaggatggtcctggctgctcagcaggatatctgcca
tcagcacagctcccctcagcacctgaatcacgagggaattcatcaggctgctttcactca
ctgatggacatcgataacccagtagatgcacagggtttgcctgctccccgagaagaccct
cattcatctcttgcatctactcctgtgccagctggaagggaagtaccaaaaatgagctct
caaaggcccaggactcaaaatgctgtattcagaatgaaggattctgctgtcattccaaac
gtgttcgatccagctaatcactcaactcaggtaacacagaatgcacatatctctaaagat
aagactgctgcaaaagcagaagagagaaaaaattcgcaaaacagatatttaccaccatct
gggaaattaaatgaagctcgtgaccctttggacacaacgaagatggatcatttacatgcc
actaactatttgcattgtaaagacagtaatcaacaacagattttttgtttaccagaggca
tccaagcattctgacccttgttcttctattctcaagtcatccgaggagagccctgggcca
cttcagttgcccaagaactgttttgtaacatctttgaagagcccagtgaagcagttgaat
tgggatcaaaaccagagaggatttgttttggatatgtcacattttaagcctgaaacagta
aaacaaaggtctctgtcagaaacaaccacgcaaccaaaacccatctcccagtataaaaac
aggactatagtggccccatcagcgttcagtgaaggacagtctggcctggctgttttgaaa
gagctgctccagaagaggcagcagaaggctcagagtgcaaatgttgcacaggaaccatta
ccagctaaaccacagctgagcgggagtgtcccgtgtcctcttgagcccaataaaggaatc
aaaagatcacggtcagtcatgtcgccaagaaagtctcgtgctccccggaacacaaagcct
aaggaaaaaacaccaaaactttcaaaaatggagtctttgagccagcagatcactagttgt
gtggatcactcggtgtctgatggcagcccagtgtttttttcagaccctggttttgaaagc
tgctactctcttgaagacagtttgtctccagaccacaattacaactttgatattaatact
ctaggtcagactgggttttgcagtttttattctgccagccagtttgtcccggcagatcaa
aatttgccccagaaattcttgagtgatgcagttcaagatcttggttctggacaaacagca
gaaaatgaccttctgggtcacagtgaccaaaaatctgaggaagaaaatcagcattcttca
agcacaagtaaatggataagatctggtgccatgagccctgacctttttgagaaaagctcc
ctggataatactgagaaccactgccacagccagcggaggaaaaacgttcatccctccact
gctagacctacttctggtgatacctcttgtacacaagaggctgaggtctgtctaaatgaa
aaattcagattgaatagaaatacggtaaataaagagagatttctgaaccttcctcagcca
accagctcagactggattcaaagccacattagaaaagaaaccacttttgaaccctgccaa
ccacttgattcagttagtacctcttttacgttgatactgtcttctcctgatggtgaactt
atagatgcagcttctgaggatttagaattgtatgtttcgagaaacaatgaggcattaact
ccaactccagacagttcaccaagatcaaccagctctccctcacaatcaaaaaatggaagt
tttacacctcgtactgctcacattcttaagcctctgatgtccccacccagtcgtgaagaa
atcatggcaactctgctggatcatgatcttgcagaaacaatttatcaggaaccattttgc
agcaacccttcagatgctccagaaaagccaagggagattggaggacgggttctcacagtg
gaaactagacttccaaatgacctgcttgagtttgagggggacttctcattagaaggtctg
cgactctggaagacggcgttctcagccatgacagaaagtcccaggccagggtctcccccc
cggtacggtcacccgactgttaacaaaagagagaggaatagccataaaactagtgtagac
aaaaaaatagtcataatgccatgcaaatgtgctccaagccaacagcaagttcagatatgg
cttcatgccaaagaagagtatgaacatttcaagaaattgcctaagaatcatcctgctgag
ccagcaaaggctgaggattccagctctgcagtattgtctgaagaaaaatctacagaagta
gtaaaagcatctaaagatttgaatttatctagtctagaagatgaaagacctgttgtgcct
acaaagaattctcctgcttctgtggcagaagctacaaaaacacaaactaaggaaacctgt
gataagtctagaagcactataggaacttgtataaatactaaaaatgaaatagactctagt
aaaactccatctgaaagcaagacagttattacttcaacactagaaaatgagaaggaggag
gaggaggaagattattatgttaattacagttcaccagattctccagtacttcctccttgg
cagcaagtagcatctccagatcccaagcaaaccagtttagaagacacagattggaaaagt
caggatattattctgtcttctgcagaaggaaatgatgtagtacctgtcggaagtgcacag
aactctccatccacccaggaggacgttaggacatcctttgacacatctccgtttccagtt
aatgaagatcctgggaattctgaagctgtttgcctgcacagcacacccattgcacagaga
aagaaccaagttggaatacctgaagttcttgggtttacgcctttgtccacagaaccaaaa
gcccagaagctgagccataagaggggaaatcacactgacggtcttcgaagggtgcttcta
accacacaaatgaagaatcaatttgctgcacttggtgctccaaagaaagagacttctcag
attgaaggaccatctttaaataacacttacggttttaaaatgagtgtggaaaacctgcag
gaagcaaaatctttacatgaggtccaacaccttaccctcatcagtttggagttacatgct
cgaaccagacgagatttggaaccagacccggagtttgacccgatctgtgctttattctat
tgcatctcctcagacacagcactgccaaatactgataaaaaagagatcactggtgctata
gtgattgacagagacaggacgctctccagccaagggagcagagaccaagcccccttgctc
acaagatctggagttacaggactagaagtcagttacgctactgatgaaacagctcttttc
caggaagtagtgaatattgtaaaaagatatgacccagacattttgttaggctatgaagtc
cagatgcattcctggggttatctcttacagagggcagctgcactgaatgttgctttgtgc
cagatgatttctcgtgtgccagatgagaagaaagagaacagatttgcagctgagctggat
gaatatggatcagatacaatgactgaaataaatattgttgggagaattaccttaaatgtt
tggagaatgatgagaaatgaggtgaatctgctgaattacacttttgaaaacgtgggcttt
cacgttcttcatcatcgtttccctctttttactttccgagttctgtcagattggtttgat
aacaaggcagatgtctacaggtggaaaatggttgatcattatgttagtcgggtccgtggg
aacctccagttgttggagaaactggatttgattggcagaacaagtgaaatggccagactt
tttggcattcagttcttacatgtgttaacaagaggctcccagtaccgtgtggagtccatg
atgctgcgcattgccaagcccatgaactacattgctgtgagccccagtgtccagcagcga
gcccagatgaaggcccctcagtgcatccccctcatcatggagcccgagtcgcgcttctac
agcaacgctgtcctggtcctggatttccagtccttgtatccttccattgtcatagcctac
aactactgcttttcaacctgcctgggacatgttgaaaacttaggaaagtacgacgcgttc
aggtttggctgtgcctccctccaggtgccccctgacttactgtaccagatcaggcacgat
atcacagtgtcacccagtggagtggcttttgtcaagccctcagtaagaaagggtgtgctg
ccaggaatgctggaagagatcctgaagaccaggatcatggtgaagcagtcaatgaaggcc
tataagcaggacaaggccataacccgaatgctcgaagctcgtcagctgggtctgaagttt
atagctaatttcacatttggctatactgctgctcatttttctggaagaatgccatgcact
gaggtgggggacagcattgtccacaaggccagagaaacgttggaacgtgctataaaacta
gtgaatgataccaaaaaatggggtgctcgtgttgtgtatggggacactgacagcatgttt
gtactcttgaaaggagccacaaaggagcagtctttcaagattggtcaagaaattgctgaa
gctgtaacagcaacaaaccccaaacctgttaaactgaagtttgagaaggtctacttgcca
tgtgtcctgcaaaccaaaaagaggtacgtggggtacatgtatgaaacactggagcagaag
gacccagtatttgatgcaaagggcatagagacagtccggagggactcctgtcctgctgtt
tccaagatacttgagtgttctatcaagctgctatttgaaacacgggacataagtcagatc
aagcagtatgttcagaatcaatgcatgaagttgctggaaggaaaagccagcatgcaggac
ttcatctttgcaaaagagtacagagggagctcagcttacagacccggatcctgcgtgcca
gccctggagatcaccaggaggatgctgagctacgaccgccgctccgagccgcgggttggg
gagcgagttccctacgtcatcgtctgcggctcgccccgtctgccactcatccagctggtc
aggaggcccagccagctgctgcaggaccccagcctcaggctgaacgccacctactacatc
accaagcagatcctgccacccctggccagggtcttctcccttattggcatcgacgtcttc
agctggtaccaggagctgccgcggatccagaaagctgcctcggccgcccgcaatgagctg
gaaggacgcaaaggcaccatctcccagtacttccccaccctgcactgccccgtgtgtgac
gagctgacccagcacgggatctgcagttcctgcaggagccaaccacagcacgtggctgtg
atcctcaaccaagagatccgagagctggagcgtaagcaggagcagctgctcaagatatgc
aagaactgcacaggctgcttcgatggacagatccagtgtgtctcccttagctgcccagtg
ctcttcaagctgtcccgcgtgagcagagacctgtcccgggctccctacctgcgccagctc
cttgaccagttttaa
DBGET
integrated database retrieval system
