Cucurbita pepo subsp. pepo (vegetable marrow): 111793919
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Entry
111793919 CDS
T05351
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
cpep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111793919
09124 Replication and repair
03420 Nucleotide excision repair
111793919
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpep01001
]
111793919
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111793919
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111793919
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111793919
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
111793919
2.7.11.23 [RNA-polymerase]-subunit kinase
111793919
Protein kinases [BR:
cpep01001
]
Serine/threonine kinases: CMGC group
CDK family
111793919
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111793919
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
111793919
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111793919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
DUF6193
Motif
Other DBs
NCBI-GeneID:
111793919
NCBI-ProteinID:
XP_023531764
LinkDB
All DBs
Position
LG04:11207934..11212322
Genome browser
AA seq
416 aa
AA seq
DB search
MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRYTHQVFARWYRAP
ELLFGSKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTTSQWSDML
YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPLP
TDPSKLPRPTSKREPMNPRVSDLNSNEGPTVLSPPRKSRRVMPEREAFEGNACKADKLDD
HGNEVREAAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcgatccatcaaagaaagtggccgacagatatttaaagcgtgaggttctc
ggagagggtacctatggcgttgtatataaggccattgatacccagacaggtcagacggtt
gcaatcaagaaaattcggcttggcaaacaaaaagagggagtaaattttacggctcttcga
gaaatcaagctgcttaaagagctcaaagattcaaatataattgagttaattgatgcattc
cctcataaagaaaatttgcatcttgtttttgaatttatggagacggaccttgaagctgtt
atacgtgatcgaaatatatttctttcccctgctgacataaaatcataccttcagatgacg
ttgaaaggtcttgctttttgccacaagaagtgggttttacatagggatatgaagccaaat
aatttgttgataggaccgaatggtcaactgaaacttgcagattttggtttggctaggata
tttgggagtcctgatcgtagatatactcaccaggtgtttgcccgatggtacagagcacct
gagctattgtttggctctaagcagtatggttctgcagtggatgtttgggcagcagcttgt
atttttgctgaactacttcttcgtagaccttttcttcagggttcgagcgacattgatcaa
ttagggaagatctttgcagcttttggaactccgacaacttctcagtggtctgatatgtta
tacctacctgattatgtggagttccaatatgttcctgcacctcctctacgttcattgttt
cctatggctagtgatgacacgctggatctcctatcaaagatgtttgcttatgatccaaag
tctagaatttccattcagcaagcattggagcataggtacttcacatctgcaccacttccc
acagatcctagtaagcttccaaggcctacttcaaagcgtgaacctatgaaccctagagtt
tcagacttaaattcaaatgagggtcctactgtcctctcacctccaagaaagtcaagaaga
gtaatgccagagcgtgaggcttttgaaggaaatgcatgtaaagctgataagcttgatgac
catggtaatgaggtgcgagaggcagctgctggaaatacaagcaaaaatgaagcagtgcca
atgtcgttggatttttctatttttggtggaaaacctccaaatagaccaacaattaacagt
gctgaccgatcacatcttaaaaggaaattagatcttgaattccagcaataa
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