Cucurbita pepo subsp. pepo (vegetable marrow): 111797979
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Entry
111797979 CDS
T05351
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111797979
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111797979
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111797979
03036 Chromosome and associated proteins [BR:
cpep03036
]
111797979
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111797979
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111797979
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111797979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
Adaptin_N
Cnd1
TAF6_C
CLASP_N
Motif
Other DBs
NCBI-GeneID:
111797979
NCBI-ProteinID:
XP_023536673
LinkDB
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Position
LG01:complement(8161525..8170176)
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AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEMLKTELRSIYGQLCQDDMPMVR
RSAATNLGKFAATIEPAHLKTDIMTIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVL
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMINNPHYLYRMTVLRAVSLLAPVMGSEITCSKLLPVVISSSKDRVPNIKFNVAKVLQS
LIPIVDQPVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgacgaaccactatatccgatagctgttctaattgatgagctcaaaaat
gatgacattcagctacggttaaactcaattcgtagactgtctacaattgctcgtgctctt
ggggaggagcgaacccgtaaagagttgatcccatttctgagtgaaaacaatgatgatgat
gatgaggtgcttcttgctatggctgaggaattgggagtgttcatcccatatgttggtgga
gttgagcatgcccatgttttgcttccacctttagaaactctatgcaccgttgaggaaacg
tgtgtgagggacaaagctgtggagtcattgtgcagaattggatcccagatgagagagagt
gacttagttgactggttcattcctctcgtcaagagattggcagctggtgaatggtttaca
gctagagtatcttcatgtgggctattccatatcgcctaccctagtgctccagagatgttg
aagactgagttgcggtcaatatatggccagctgtgtcaagatgacatgcccatggtaagg
aggtctgcggcaacaaatttaggaaaatttgctgccactattgaacctgctcatctgaag
actgatatcatgacaatatttgaggatcttacacaagacgaccaagactctgtaagattg
ctggccgttgagggttgtgctgctttgggcaagttattggagccccaagattgtgtattg
catattcttcccgttattgttaacttctctcaggataagtcttggcgcgtgcgttacatg
gttgcaaaccagttatacgaattgtgtgaggctgtaggaccggaaccaactaggacggat
ttggtacctgcttatgtgcgcttgcttcgcgacaatgaagctgaagttcgtatagcagct
gctggcaaagtgaccaagttttgccggattttaagtccagaattggcaatccagcatatc
cttccctgcgtgaaggaattgtcgtcagattcctctcagcatgtccgttcagctttagcc
tcagttatcatgggaatggctcctgtgttgggaaaggatgctactattgaacagctgctt
ccgatattcctttctcttctgaaggatgaatttcctgatgtgcgcctcaatatcatcagc
aagcttgatcaagtaaatcaggttattggaattgatctcttgtcccaatcattgttacct
gccatagttgaacttgctgaggataggcattggagggttaggttagctattatagaatac
attcctttactggcaagtcaactgggtgtagggttttttgacgataagcttggcgctctt
tgcatgcagtggttacaggataaggtttactcaatccgtgatgctgctgcaaataatttg
aagcgccttgcagaagaatttggtcctgagtgggcaatgcagcacattgtcccacaggtt
cttgacatgattaacaacccacactatttgtatcgaatgactgttcttcgtgcggtctct
cttcttgccccagttatgggctcagaaatcacatgctcaaagcttttaccagtggttatc
agttcttccaaggatagggttccaaatatcaagtttaatgtggcgaaggtgttgcagtct
ctcattcccatagttgaccaacctgtggtggaaaaaactatccgtcctagtctagttgaa
ctgagtgaggatccagatgtagatgtccggttctttgctaaccaagctcttcaatcaatt
gatcacgtgatgatgtctagttag
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