Cucurbita pepo subsp. pepo (vegetable marrow): 111801977
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Entry
111801977 CDS
T05351
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00052
Galactose metabolism
cpep00511
Other glycan degradation
cpep00531
Glycosaminoglycan degradation
cpep00600
Sphingolipid metabolism
cpep00604
Glycosphingolipid biosynthesis - ganglio series
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
111801977
09103 Lipid metabolism
00600 Sphingolipid metabolism
111801977
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
111801977
00604 Glycosphingolipid biosynthesis - ganglio series
111801977
00511 Other glycan degradation
111801977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111801977
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
111801977
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111801977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
111801977
NCBI-ProteinID:
XP_023541998
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Position
LG09:complement(588847..598989)
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AA seq
719 aa
AA seq
DB search
MSYSSKLSAMAKRRPVRASLIFLLLILLTAFGVIVPVFALLPSLNSHSHRLFRHHQDHSE
LKKVQTRKFEIDDDMFWKDGKPFQIIGGDIHYFRTLPEYWEDRLLRAKALGLNTIQTYIP
WNLHEPQPGNFTFSGIADIVSFIQLCQKLDFLVLLRAGPYICAEWDLGGFPAWLLARKPA
PTLRSSDPGYLQWVERWWGIILPKVAPLLYNNGGPIIMVQIENEFGSYGDDQAYLHHLVK
LARGHLGNEVILYTTDGGTRETLEKGTIRGDAVFSAVDFSTGERPWPIFNLQKEFNAPGK
SPPLSAEFYTGWLTHWGENIATTDADSTAAALREILAGQGSAVLYMAHGGTNFGFYNGAN
TGDSALDYKPDLTSYDYDAPIKESGDIDNAKYDAIRRVIQRYSGALLPSAPSNIEKIGYG
PIHLQKSAFLFDLIHMIDPVDVFISEEPLSMESVDQSFGFLLYATKYVAKDNEDGHVLFI
PKVHDRAQVFLSCSSRNKGVRPASVGIIERWSNRRLNLPNTRCDSNILYILVENMGRINY
GRYLFDKKGILSSVYLDDNILYGWKMIPIPFNNLNEIPRVNSFSHIARSVHNKITAKRGL
EVKHDNISSEPTLYTGYFYVDKVNLRKDTFLSFAGWTKGIAFVNDFNLGRFWPVVGPQCS
LYVPAPILRLGKNVLVIVELESPNGEGVVHSVDRPDVSCGDSSYSNLSQLLTHQHSPRL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagttcgaaactttcagctatggcgaagagacgacctgtgagagcttctcta
atcttcctcctcctcatcttgcttacagcttttggagtgattgttccagtgtttgctctt
cttccttcactgaattcccactcccaccgtctcttccgccatcaccaagatcattccgag
ctcaagaaggttcaaactagaaagtttgagattgatgatgacatgttttggaaagatggt
aagccattccagattattggtggcgacatacattatttccgaactcttcctgagtactgg
gaagatagactgcttagagcaaaggcattgggcttaaacacgatccaaacttacatcccc
tggaatctgcatgagccacaaccgggaaatttcacgtttagtgggattgcagacatagtg
tcgtttatccaactctgtcagaagctagattttctagttttgctccgggcaggaccttat
atatgtgcagagtgggatttagggggttttcctgcttggttgcttgccagaaagccagct
cctacattaagatcctcagatcctggctacctccaatgggttgaaagatggtgggggatt
attcttccgaaggtagctccccttctttacaacaatggaggccctattataatggtccag
attgaaaatgaatttggctcatatggagatgatcaagcttaccttcaccatttggttaag
ttggcgagaggccaccttgggaatgaagtaatactgtatactacagatggcggtaccagg
gaaactcttgagaaaggaaccattcgtggggatgctgtcttttcagctgttgacttttct
actggtgaaaggccttggcctatttttaatttacagaaggagttcaacgcccctggaaaa
tctccacctctttctgcagagttctatactggctggcttacacattggggagaaaatatt
gcaacaactgatgccgactctacagcagctgcgttgagagaaattttggcagggcaaggg
tctgccgtgctttatatggctcatggtggaacaaattttggattttataatggagcaaat
acaggtgatagtgcgttggattacaagcctgatcttacttcttatgattatgatgcccca
attaaggaatcgggcgacattgacaatgctaaatatgatgcaattcgaagggttatacag
cgctatagtggagcattgcttccttcagctccttctaatattgaaaagataggttatgga
ccgattcacttgcagaaaagtgcatttttgtttgatctgatccatatgatagatcctgtt
gatgtgtttatatctgaagaaccactgtcaatggaatctgtggatcagagctttggattt
ttattatatgcgaccaaatatgtggccaaggacaatgaagatggacacgttttatttata
ccaaaggtgcatgatcgagcacaagtgttcctttcttgctcttctagaaacaagggtgtg
cggccagcttctgttggcattattgaaagatggtcaaaccggcgacttaacctgccaaat
acgagatgtgactcaaatatcttatatattttggttgaaaacatgggtcgcataaactat
ggacgctacttgtttgacaagaagggtatcttatcatccgtttatttggacgacaatatt
ttatatggatggaaaatgatcccaatccctttcaacaacctcaatgagattccgagagtc
aattctttctctcatattgctcgttctgtacacaacaaaatcacagcaaagagaggttta
gaagtcaagcatgataacatctcgagcgaaccaacactttacaccggttatttctacgtt
gacaaagtgaacctcagaaaagatacattcttatcatttgctggctggactaaagggatt
gcatttgtgaatgactttaatctcggaagattttggccggttgtagggccacaatgcagc
ctatatgttcctgctccgattcttcgccttgggaagaatgtactggtgattgttgagtta
gaatctccaaatggcgagggtgttgtacattctgttgatcggccagacgtctcctgtggg
gattcttcctactccaatttatctcagcttttaacccaccaacactctcctcgcctttga
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