Cucurbita pepo subsp. pepo (vegetable marrow): 111810881
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Entry
111810881 CDS
T05351
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008
Ribosome biogenesis in eukaryotes
cpep03013
Nucleocytoplasmic transport
cpep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111810881
03008 Ribosome biogenesis in eukaryotes
111810881
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111810881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111810881
03009 Ribosome biogenesis [BR:
cpep03009
]
111810881
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111810881
03036 Chromosome and associated proteins [BR:
cpep03036
]
111810881
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111810881
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111810881
Pre-60S particles
111810881
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111810881
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111810881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
111810881
NCBI-ProteinID:
XP_023553471
LinkDB
All DBs
Position
LG14:1261843..1274802
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERSAADQILRDLQNNADMWLQVVHILQN
TKNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSSNEASFRVERLYVNK
LNIILVQILKHEWPAKWRSFVPDLVSAARTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLFVLSISQRTELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPVPSYRNLALQCLTEVAALNFGDYYNVQYVKMYNVFMVQLQTILPPGTNIPEAYA
HGSSEEQAFIQNLALFFTSFYKSHIRVLESTQESVSALLMGLEYLINISYVDDNEVFKVC
LDYWNSLVLELFEAHHNMDNPAVSANMMGLQVPLISGVVDGLGSQLMQRRQLYSGPMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKSMRETLIYLSHLDHDDTEKMM
LKKLSRQLSGEDWSWNNLNTLCWAIGSISGSMMEDQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLTSLPTTVVDLEPHQIHAFYESVGNMIQAEPDPQKRDEYLQR
LMELPNQKWGEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLD
MLNVYRMYSELISSSIAEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMEPILLDYARNLPDARESEVLSLFATIINKYKNTMIEDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATYCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLSCLAESGV
LTEPLWDVATVTYPYQNNVAFVREYTIKLLSSSFPNMTAAEVTQFVNGLFDSRNDLSVFK
DHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERDRQRMLSIPGLIAPNEIQDEMVDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagaagctcagggatttgagccagccgattgacgttcctttgctcgatgca
actgttgcggcattctatggcactggatctaaggaagagaggagcgccgcagatcaaatt
ttaagggacctacaaaacaatgcagatatgtggctgcaggttgtgcacattttgcaaaat
acaaagaacttaaataccaagttctttgccttacaggttctagaaggtgtaatcaaatat
agatggaatgcgttaccggttgaacaaagagatggaatgaagaattatatatctgatgtg
attgtgcagctttcaagtaatgaagcttcttttcgagtggaaagactgtatgtcaacaag
cttaacatcatcttggttcagatattaaagcatgaatggccagcaaaatggagaagcttt
gttccggatcttgtttcagcagctagaactagtgaaacaatttgtgagaactgcatggcg
attttaaaactcttgagtgaagaggtctttgatttctctaggggagagatgacacaacaa
aaaatcaaggagcttaaacaatctttgaacagcgagtttcagctcatccatgagttatgc
ttatttgtgctatcaatatctcaaagaactgagctcatccgagcaacattatcaacatta
catgcttttctttcatggattcctttgggatatatatttgaatccccattgcttgaaaca
ttactgaagtttttcccggtcccatcatatcgtaatcttgctctccagtgtctaactgag
gtggcagctcttaattttggggattactacaatgtgcagtacgttaagatgtataatgta
ttcatggtacaattacagacaattctcccacctggtacaaacatcccagaggcctatgct
catggatcaagtgaggaacaggcttttattcagaacttggcactatttttcacttcattt
tacaagtcgcatattcgagttctggaatccactcaggagagtgtatctgcattgctgatg
ggtcttgaatatcttattaacatctcatatgttgacgacaatgaagtttttaaggtatgc
ttggattattggaactccttggtcctggaactgttcgaggcacaccataacatggacaat
ccagccgtgtctgcaaatatgatgggattgcaggtgcctttgatttctggtgtggttgat
ggccttggctcacaactcatgcagaggaggcagctttactctggtcctatgtcaaagttg
agaatgcttatgatatgccgcatggctaaacctgaagaggttctcattgttgaggatgag
aacggtaacattgttcgagaaaccttgaaggataatgatgtgcttgttcaatataagagc
atgcgagagacattaatttatttgtcgcaccttgatcacgacgacactgaaaagatgatg
ctgaagaaattaagtagacaactaagtggtgaagattggtcatggaacaacttgaacact
ctatgctgggcaattgggtctatctcgggttccatgatggaagatcaggagaacagattc
ttggtgatggtcatacgtgatttgttgaatttatgtgaaatcaccaaaggaaaggataat
aaagctgttattgctagcaacatcatgtatgttgttggtcagtatcctagatttttaaga
gctcactggaaattcttgaaaaccgttgtgaacaagttgttcgagttcatgcatgaaaca
catccaggagtgcaggatatggcttgtgacacattcttaaaaattgttcaaaagtgcaag
cgaaagtttgtcattgtacaggttggagaaaatgagccattcgtctctgaacttcttact
agtcttccgacaacagttgttgatcttgagcctcatcaaattcatgctttttacgaatct
gttggtaatatgattcaagcagaacctgatccacagaagagagatgaataccttcagagg
ttgatggagcttccaaaccagaaatggggtgaaattattggtcaggcacgccaaagtgtg
gatttcctaaaagatcaagatgtaataagaacggtgctcaatatactacagacaaataca
agcgttgccagttctcttggaacctatttcttacctcagatatctttgatttttttggat
atgctcaacgtgtacagaatgtatagcgagcttatatcaagtagcatcgctgaaggaggg
ccatacgcatctaaaacatcctatgttaaacttctacgatcagtgaagagggaaactcta
aagcttattgaaacattcttggacaaggctgaagatcaaccacaaattggcaagcagttt
gtgcccccaatgatggaacccattcttcttgattatgctaggaatctcccagatgctcgt
gaatcagaagtcttatctctttttgctacaattataaataagtataagaatacaatgatt
gaggatgtgcctcgtatatttgaagcagtcttccaatgcacgttggagatgattactaaa
aattttgaagattatccagagcatcgcctcaagttcttttcacttctacgtgccattgct
acgtattgttttcctgccctgattcggctgtcaagtcagcaattaaagcttgttatggat
tcaattatatgggcatttcggcatacagagaggaatattgctgaaactgggctcaatcta
ctactagagatgctaaaaaattttcaggcttctgagttctgcaatcaattttatcgaaca
tatttcttgaccatagagcaagaaatatttgcagtcttgacggacacgtttcataagcca
ggatttaagttacatgtcttggtcctgcaacacttgtcttgcttggcggagtctggtgta
ttaacagaacctttgtgggatgttgcaactgttacttatccgtaccaaaataatgtggcc
tttgttcgggagtacactatcaaactgctgagttcttcattccccaacatgactgcagca
gaagttactcaatttgtgaatggactgtttgactcgagaaatgacctctctgtgtttaag
gatcacattcgagactttctagtgcaatccaaagaattttcagcacaggataataaagat
ctttatgctgaagaggcagctgctcagcgggaaagagatcggcaacggatgctttctatt
ccagggcttattgctccaaatgagattcaagacgagatggtcgactcgtaa
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