Clostridium perfringens ATCC 13124: CPF_1614
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Entry
CPF_1614 CDS
T00378
Name
(GenBank) glycosyl hydrolase, family 20
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00511
Other glycan degradation
cpf00520
Amino sugar and nucleotide sugar metabolism
cpf00600
Sphingolipid metabolism
cpf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
CPF_1614
09103 Lipid metabolism
00600 Sphingolipid metabolism
CPF_1614
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CPF_1614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cpf03110
]
CPF_1614
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
CPF_1614
Chaperones and folding catalysts [BR:
cpf03110
]
Intramolecular chaperones
Others
CPF_1614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
Glyco_hydro_20
Glyco_hydro_20b
Cohesin
Laminin_G_3
fn3
fn3_2
Big_15
DUF3999
Motif
Other DBs
NCBI-ProteinID:
ABG83298
UniProt:
A0A0H2YQV2
LinkDB
All DBs
Position
complement(1823380..1827795)
Genome browser
AA seq
1471 aa
AA seq
DB search
MKRLIACGIAASIVSVNGLSVLASELNKSDKVNLALNKKTVASSREVNDKWGAELITDGI
KDKPSDPNAKPGNSRWASSRSVPQWIYIDFEEATTFDQVDILWDGAYSRNYKLEVSNDGE
TWEEVYATSEGKGNQESINLGEDITANYLRVSCEDTAHEWGNVSIYEVEVYDNENEENVT
PPETEIGVNIALNKTATASASETNTLTPDKVVDGDTSSRNSRWSSGGFSNGAKQWITIDL
EKESTFDKVRLFWEAANAKVYEIQTSNDNENWKTVHRNEAGKGGTEVIELSEKENARYVR
VYCEENNPAVWNAVSLYEVEIYNGEIPSSGDLDEVLNSLEVPTINKGDSKLQMPEVPKGF
EIKFIGADYNQIINDDMTINEPLVDTKVVVDFEIKKGSLKRETTGIEITVPGKYSGSLGS
NTKPEVVPSLREWVGKDGNFTIRDSSRIVIDPTYENELSKTASEFKSDYEEIVGKPMEIV
YSSSPVEGDFYFTLNCEDKSIGEEGYYMYVDEYVKVEATHNTGAFYSTRSILQILKQNGE
TIQKGIVRDFPRYENRGFMLDAGRKFFTMDYLEQFMEVMSWYKLNNFQVHLSDNYIWTNN
ENWETAYAAFRLESDTYPGLTATDGSYTKEEFREFIEKSGDHGVEIIPEIDVPAHSLAFT
RYDQSLALGTGGDATYLDVGNPKVYDFVDGLFDEYLGGENPVFGDQDFHIGTDEYKGAPE
KKEEFRAFTDRYLKKVRDDYGRNPRLWGSLDVFPGQTPVTSDGVLMNIWYRGYADARNMI
NQGYDILNTQDADLYIVPEAGYYNNYLNTRFLYNEWEPRRFASDYKLPAGHPQLKGGMFA
VWNDMIDEKANGISERDIYDRSFQAAQVLSEKMWAAPDSETSFEEFKERVDKVSDVPDSN
LTYDVESKTETVIDYDFEEDSTENIKDNSGNEYNATGVNVESVEGKEGKGIKLSGGESYI
DTPIDNKGLDYTVSMWVKKDANGDYSEQILSESNTGVLKACQKETGNVGFSREGYDYSFN
YKLPEDEWVELTFIGELNKTSLYVNGEFIETINKSNGGKVGTFILPLDKIGSSTNSFKGS
IDEITIKDGAHKIVDPTVIPQEQMSATASSEHPNIGSEGIADFAIDGDESTIWHTKWSPV
EALPQHITLDLGGSYNINKFTHMPRQDALNGSISKYEFQVSTDGENFTKVLEGDWTADHS
TKVLKFDPVEATHVRLVAKAGHGGFASAAELNVHQVLEVPQENVGQSFLTLPESLKVNEN
FDVFLGANEIKEDLSAYAAEFTLKYNQEVFDLVEVASGIDGVLVNYKEVEPGVVKILVAS
LEKTIENDTNLVKVTLTPKSESEREIFEVISANLGDGENGKVCELGLTSGEVAVGKGSVD
IIVNPVENFVASEISRKYVNVTWEAPKTTEGLEGYILYKDGKKVGEVGADETTYKFKGLN
RHTIYNFKIAAKYSNGEISSKKSITLRTSRN
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggttaatagcttgtggaatagcagcaagtatagtttcagttaatggattatct
gttcttgcttctgagttaaataagtcagataaagttaatttagctttaaacaaaaaaact
gttgcctcttcaagagaagttaatgacaaatggggtgcagaattaataactgatggtatt
aaggataagccaagtgatccaaatgctaagccaggaaattctaggtgggctagttcaaga
agtgtaccacaatggatatacattgattttgaagaagcaacaacctttgatcaagttgat
atactttgggatggtgcatattcaagaaattataaattagaggtttctaatgatggggaa
acttgggaagaagtttacgcaactagtgaggggaaaggaaatcaagagtctataaatctt
ggagaagatataactgctaattatttaagagttagttgtgaagatacagctcatgaatgg
ggaaatgtatcaatatatgaagttgaggtttatgataacgaaaatgaggaaaatgtaact
cctccagaaacagagataggagttaatattgctttaaataaaactgctacggcatcagca
tcagaaactaatacacttactccagacaaagttgtagatggagatacatcttcaagaaat
tcaagatggtcaagtggaggattttctaatggtgctaaacagtggataactattgaccta
gaaaaggaaagcacttttgacaaggttagattattctgggaagctgccaacgctaaggtc
tatgaaatccaaacttctaatgataatgaaaattggaaaacagttcatagaaacgaagct
ggaaaaggtggcactgaggttatagaattaagtgaaaaagaaaatgcaaggtatgtaaga
gtttattgtgaagaaaataatccagcagtatggaatgcagtatctttatatgaagtagag
atatataatggagagattccttcatctggtgatttagatgaagttttaaactcattagaa
gttcctactataaataagggggactctaaacttcaaatgccagaggttccaaaagggttt
gagataaaatttattggggcagattataatcaaataataaatgatgatatgaccataaat
gaacctttagtagatacaaaggtagttgtggattttgaaataaaaaaaggcagtctaaaa
agagaaactactggtattgaaataactgtacctggtaaatattctggttctttaggaagt
aatactaagccagaagtagttccaagtttaagagaatgggttggaaaagatggaaacttt
actataagagattcttcaagaatagttattgatcctacctatgaaaatgaactaagcaaa
actgcaagtgaatttaaatctgattatgaggagatagttggtaaaccaatggaaatagtt
tactcaagttcacctgtagaaggagatttttattttactttaaattgtgaagataagagt
attggagaagaaggatattacatgtatgtagatgagtatgtaaaggttgaagctactcat
aatacaggagctttctactcaactagatcaatacttcaaatattaaagcaaaatggagaa
actattcagaaaggaatagttagagatttcccaagatatgaaaatagaggatttatgctt
gatgcaggaagaaaattctttacaatggattatttagagcagtttatggaagttatgtct
tggtacaaattaaataacttccaagttcatttaagtgataactatatttggactaataat
gagaattgggaaactgcttatgctgcttttagattagaatctgacacatatccaggttta
acagcaacagatggaagttatactaaagaagagtttagagaatttatagaaaagtctggg
gatcatggagtagaaattattccagaaatagatgttcctgctcactccttagcatttact
cgctatgatcaatctttagccttaggtacaggaggagatgcaacttatttagatgtaggt
aatccaaaggtttatgattttgtagatggattatttgatgaatatttaggaggagaaaat
ccagtctttggagatcaagatttccatattggaacagatgagtataagggagcaccagag
aaaaaagaagaatttagagcatttacagatagatatcttaaaaaagtaagagatgattat
ggtagaaatccaagactatggggaagtttagatgttttcccaggacaaactcctgtaact
agcgatggagtccttatgaatatatggtataggggatatgctgatgctagaaatatgata
aatcaaggatatgatattttaaatacacaggatgcagatctttatatagttccagaagca
ggttactataataactatcttaacacaagatttttatataatgagtgggaaccaagaaga
tttgcttcagattacaaacttccagcgggacatcctcaattaaagggaggaatgtttgct
gtatggaatgatatgatagatgaaaaagcaaatggaatttctgaaagagacatctatgat
agatcattccaagctgctcaagttttatcagaaaaaatgtgggcggcacctgatagtgaa
acaagttttgaagaatttaaagaaagagttgacaaagtaagtgatgttccagattctaac
ttaacttatgatgtggaatctaaaactgaaactgtaattgattatgattttgaagaagat
tctacagaaaatattaaagataattctggaaatgaatataatgctacaggagtaaatgta
gaatctgtagaaggtaaagaaggaaaaggaattaaattaagtggaggagaaagctatatt
gatactccaattgataacaaaggtttagactatacggtttctatgtgggtgaagaaagat
gcaaatggagattatagtgagcaaatattatcagaatctaacacaggggtattaaaggct
tgtcaaaaagaaactggtaatgttggtttctcaagagaaggatatgactattcatttaat
tataaattacctgaggatgaatgggtagagttaacatttattggagaattaaataaaaca
agtctttatgtaaatggagaatttatagaaactataaataagagtaatggtggtaaggta
ggaacatttattttacctttagataaaataggaagttcaactaattcctttaagggtagc
atagatgaaattactattaaggatggggctcataaaattgtagatcctacagttatacct
caagagcaaatgagtgcaactgctagcagtgagcatcctaatataggatcagagggaata
gctgattttgctatagatggagatgaaagtactatatggcatactaagtggagtcctgta
gaagcattacctcaacacattactttagacttaggtggaagttataatataaataaattt
actcatatgccaagacaggatgccttaaatggtagcataagtaaatatgaattccaagtt
agtactgatggagaaaactttacaaaggttttagagggagattggactgctgaccatagt
actaaggtattaaaatttgatccagtagaagctactcatgtaagattagtggctaaagct
ggtcatggtggatttgcctcagctgctgaattaaatgttcatcaagttttagaagttcca
caagagaatgtgggacaaagtttcttaactttaccagaaagccttaaagtaaatgaaaat
tttgatgttttcttaggtgctaacgaaataaaagaagatttatcagcttatgcagcagaa
tttactttaaaatataatcaagaagtatttgacttagttgaagttgcaagtggaatagat
ggagttttggtaaattataaagaagtagaaccaggcgtagtaaaaatattagttgctagt
ttagaaaaaactatagaaaatgatacaaacttagtaaaggtaactcttactcctaagagt
gaatcagaaagagaaatttttgaagtaatttcagcaaacttaggtgatggagaaaatgga
aaagtttgtgaattaggattaacaagtggagaggtagcagtaggcaaaggtagtgtagat
ataattgttaacccagtagaaaactttgtggcttcagagattagtagaaaatatgtaaat
gtaacttgggaagctccaaagacaactgaaggtttagaaggatatattttatataaagat
ggtaaaaaggttggagaagttggtgctgatgagacaacttataaatttaaaggcttaaat
agacacacaatttacaactttaaaatagctgctaagtattcaaatggagaaatttctagt
aagaagtcaataactttaagaacaagcagaaattag
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integrated database retrieval system