Clostridium perfringens ATCC 13124: CPF_1929
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Entry
CPF_1929 CDS
T00378
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG, TIGR01125
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpf03009
]
CPF_1929
Enzymes [BR:
cpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CPF_1929
Ribosome biogenesis [BR:
cpf03009
]
Prokaryotic type
ribosomal protein modification factors
CPF_1929
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
MetOD1
TRAM
Motif
Other DBs
NCBI-ProteinID:
ABG84692
UniProt:
Q0TPS8
LinkDB
All DBs
Position
complement(2165216..2166553)
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AA seq
445 aa
AA seq
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MAKYKVGMVSLGCDKNRVDSEIMLGMVQNEYELTNNPKEADIIIVNTCGFIEKAKQESIN
TILDMAKYKTSHNCKLLIATGCLTQRYGDELLELMPEIDIMLGVNDYAKINEAIMNFING
NNEKVKATNYSDVSINEGLRLITTDKATAYLRIAEGCDNFCTYCIIPKIRGKFRSRALES
IVEEAKKLAENGVKELILIAQDTTNYGIDIYGEKKLHLVLRELAKIEGIEWIRVLYCYPE
AIYDELIKEISVNDKVCNYLDLPIQHISNNVLKRMGRKTTKEEIIGKINDLRKNVPNIVL
RTSLIVGFPGESCEDFNELKDFIKTIKLDKVGVFTYSREEGTPAAIMEDQIDEEVKKARE
EEIMLLQKEVSEEINKNKVGREYDVLIEKFNGEYYIGRSYEMAPDIDGCIYVKGNGAKKD
QFCKVKIEKALEYDLVGVVCNESCK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaatataaggtaggaatggtgagtttaggttgtgataaaaatagagttgactca
gaaatcatgcttggaatggttcagaatgagtacgaacttactaataatccaaaggaagct
gacataataatagtaaatacttgcggatttatagaaaaggctaaacaagaatccataaac
acaatattagatatggcaaaatataaaacaagtcacaactgtaagttacttatagctaca
ggctgcttaactcaaagatatggtgatgaattattagaattaatgcctgaaatagacata
atgttaggtgttaatgattatgctaaaataaatgaagccataatgaactttataaatgga
aataatgaaaaagtaaaagctacaaattacagtgatgtatcaattaatgaaggattaaga
cttataacaactgataaagctactgcatacttaagaattgcagaaggatgtgataatttc
tgtacttattgcattattcctaaaatcagaggtaagtttagaagtagagctttagaaagt
attgtagaagaagcaaaaaaattagctgaaaatggagtgaaagagttaatattaatagct
caagacactactaattatggtatagatatatatggtgaaaagaaacttcacttagtttta
agagaattagctaagatcgaaggaatagagtggataagagttctttattgttatccagag
gctatatatgatgaacttataaaagagatctcagtaaatgataaggtatgtaattatctt
gacttacctatacaacatattagtaataatgttttaaaaagaatgggtagaaaaacaaca
aaagaagagataataggaaaaattaatgacttaagaaaaaatgttcctaacatagtttta
agaacttctttaatagttggtttcccaggagaatcttgtgaagatttcaatgaattaaaa
gattttataaaaacaataaaattagataaagttggagtatttacttactcaagagaagaa
ggaacacctgctgctataatggaagatcaaatagatgaagaagttaaaaaagctagggaa
gaagaaataatgttacttcaaaaagaagtatcagaagaaattaataaaaacaaagtaggt
agagaatatgatgttcttatcgaaaagtttaatggagaatattatataggaagaagctat
gagatggctccagatatagatggatgtatttatgtgaaaggaaatggagctaaaaaggac
cagttctgtaaagttaaaattgaaaaggccttagaatatgatttggtaggagttgtatgc
aatgaatcttgcaaataa
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