Chrysemys picta (western painted turtle): 101932054
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Entry
101932054 CDS
T04662
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X4
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101932054 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101932054 (POLR1B)
Enzymes [BR:
cpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101932054 (POLR1B)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101932054 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101932054
NCBI-ProteinID:
XP_005293569
UniProt:
A0A8C3F8N5
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All DBs
Position
19:2820502..2853528
Genome browser
AA seq
924 aa
AA seq
DB search
MHCVRDEHSAINMNLHYLENGTVMLNFIFQKELFFLPLGFALKALVGFSDYQIFQELIKG
REDNSFYKNCISQMLRMVMEEGCATQKQVLNYIGKCFRVKLNLPEWYPNEQAAEFLLDQC
ICIHLKTKTEKFYLLCLMTRKLFAFAKEECMEENPDSLMNQEVLTPGQLYLMFLKERMEA
WLLSVKVALDKRSQKTNITINSENMMKLFSMGIDVTRPFEYLLATGNLRSKTGLGMLQDS
GLCVVADKLNFIRYLSHFRCVHRGAAFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLM
NHITTVCEIVTQSAYTLSLPPLLCSLGVTPVDGTPSQPYAECYPVTLDGSLVGWVEKDMA
PTIADTLRHFKVMQEKKIPAWTEVVLIPMTGKPSLYPGLFIFTTPCRMVRPVRNLALGKE
ELIGTLEQVFMNIAVLEDEIVPGVTTHQELFPHSMLSVVANFIPFSDHNQSPRNMYQCQM
GKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPVGTNAIVAVISYTGY
DMEDAMIVSKASWERGFAHGSVYKTESIDLAEKIKQVDDSLVFGVKPGDPRVIQNLDADG
LPHIGSILQYGDPYYSYLNLSTGESFITYYKSKESCIVDNIKVCSNDSGNGKFKSVCITM
RIPRNPTIGDKFASRHGQKGILSRLWPVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIE
SMAGKSAALHGLCHDATPFTFSEENSALEYFGKMLKAAGYNYYGTERMYSGISGVELEAD
IFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTS
FLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKPPPSWSTTRNRKYYCTVCNQSDTIDTVS
VPYVFRYFVAELAAMNIKVKLDVN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtgttagggatgagcactctgctataaacatgaaccttcactacctggaaaat
ggtacggtgatgctgaacttcatttttcagaaagagttgttcttcctccccctgggattt
gcactgaaggcactagttggtttctcagattaccagatttttcaggagttgatcaaagga
agagaagacaactccttctataagaactgcatctctcagatgctgagaatggtaatggag
gagggctgtgccacgcagaagcaggtccttaactacattgggaaatgcttccgagtgaaa
ctcaaccttcctgagtggtacccaaatgagcaagctgcagaattccttttggatcagtgc
atctgtatccacttgaaaaccaaaactgagaagttctacttgctttgtctgatgacccgg
aagctgtttgcttttgccaaagaagagtgcatggaggagaatccagacagccttatgaat
caggaggtgcttaccccagggcagctttacctcatgttcttaaaggagaggatggaagct
tggttgctttctgttaaagtagccttggacaaaagatctcaaaagaccaatataaccatc
aattcagaaaatatgatgaagctattcagcatgggaattgatgttacaaggccatttgaa
tatctccttgctactggtaacctgcgctctaaaacaggtctgggtatgctacaagattct
ggtctgtgtgtggtggcagacaagctgaattttattcgttacctgtcccattttcgctgc
gtacacagaggtgctgcgtttgccaagatgagaaccaccacggtgcgcaaactgctccca
gaatcctggggcttcctgtgccctgtgcacacccccgacggagagccctgtgggctgatg
aaccatattacgactgtctgtgaaatagtgacgcagtcagcctacaccttgtccctgcca
cctttgctctgctccttaggtgtcactcccgttgatgggactccaagccaaccctatgca
gagtgttacccagttacactggatggctcgttagtgggctgggtagaaaaagatatggct
cctacgattgcagatactctccggcactttaaggtaatgcaagaaaagaaaattccagcg
tggactgaggtagtccttattccaatgaccggaaaacctagtctgtatccaggattattc
atttttactaccccttgcaggatggttcggcctgtgagaaatttggccttgggaaaggaa
gaattgattggtactctggaacaggtcttcatgaacattgctgtccttgaggatgaaatt
gtgcctggcgtgaccactcaccaggagctctttcctcatagcatgttgagtgtggtagcc
aacttcattccattctctgatcacaaccagagtcccagaaacatgtaccaatgccagatg
ggcaagcaaactatgggctttccacttctgacttatcaggatcgctcagataataaactg
taccgacttcagaccccgcaaagccccttggtgcggccgtccatgtacgattactatgac
atggacaattatccagtcggtaccaatgcaatcgttgctgtcatctcctacactggctat
gacatggaagatgcaatgattgtaagtaaggcttcgtgggagagaggatttgcccacggc
agcgtttacaagacggagagcatagatcttgctgaaaaaatcaaacaagtagatgacagt
ctggtgtttggagtcaagcctggtgatccaagggttatacagaatctggatgctgacgga
ctgccacacattggatccatactgcagtatggggacccttactacagctacctgaacctc
agtactggggagagcttcataacctattacaagagtaaggaaagttgcattgtggataac
atcaaagtgtgcagcaatgacagtggaaatggaaaatttaaaagtgtttgcatcactatg
agaatccctcgtaatccaactattggggacaaatttgccagccgacatggacagaagggt
attttgagcagactctggccagttgaggacatgccatttacagagagtggaatggttcca
gatattctcttcaatcctcatggctttccatcccgaatgaccattggaatgctgattgag
agcatggcagggaagtctgcagcattgcatggcctctgtcacgatgccacccccttcaca
ttttcggaggagaactctgccttggaatactttggcaagatgttgaaggctgctggctat
aactactatggaacagagaggatgtacagtggaatcagtggggtggaactggaggcagac
atttttattggagttgtatactatcaacgcctgcgtcacatggtttcagacaagttccaa
gtgaggacgacaggagccagagataaagtcaccaaccagcccatcggtgggaggaatgtc
cagggtgggattcgcttcggagagatggaacgcgatgccttgttggctcacggcacgtcc
ttcttgctgcatgaccgtctcttcaactgttccgatcgttctgtggcccacgtctgtgtc
aagtgtggcagtttgctttctcctttgttggagaagcctccgccttcctggtccacgacg
cgcaataggaaatactactgtactgtgtgcaatcagagcgacacaatcgacactgtttct
gtgccttatgtcttccggtattttgtggctgagttggcagccatgaacataaaagtgaaa
ctcgatgtgaactaa
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