Chrysemys picta (western painted turtle): 101933800
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Entry
101933800 CDS
T04662
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X3
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101933800 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101933800 (CLP1)
Enzymes [BR:
cpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
101933800 (CLP1)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101933800 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
AAA_16
ATP_bind_1
AAA_22
TniB
AAA_18
CbiA
Motif
Other DBs
NCBI-GeneID:
101933800
NCBI-ProteinID:
XP_005295013
UniProt:
A0A8C3HWB7
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Position
17:complement(18712217..18716932)
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AA seq
462 aa
AA seq
DB search
MPSRTSGPGAGCARGLASPGWLVYRQAAAAAGLYRIEMAEEAGDEKKQVAKFELERETEL
RFEVEASQTVQLELLAGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCTVQLSGRTEVAY
ISKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGR
RPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKI
TSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYHALVHAASAFEVDVVVVLDQERLY
NELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRIREYFYGFRGCFYPHAFDVKFSD
VKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTADGSEENISETSV
AGFIVVTGVDVDRQVFTVLSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccgcacttccggccccggggccggatgtgcgcgtggccttgcgtctcctggt
tggttggtttatcgccaggcagcggcggcggcgggcctatacaggatagagatggcagag
gaggccggggatgagaagaagcaggtggcaaagtttgagctggagcgggagacggagctt
cgctttgaggtggaggcctcgcagactgtccagctggagctgctggcaggcatggcggag
attttcggcaccgagctgacccgtaacaagaagttcactttcgatgctggtgccaaggtg
gccgtgttcacgtggcatggctgcacagtgcagctgagcggccgcactgaagtggcttac
atatcgaaggacacgcccatgctgctctacctcaacacccacacagccctggagcagatg
cggcggcaggcagagcgtgaggatgagcgggggccccgggtcatggtggtggggcctacg
gatgtgggtaagtcgacagtgtgccggctgctgctgaactacgctgtgcggctggggcgc
cgacccaccttcgtggagctggacgtgggccaaggctcggtctccatccctggcaccatg
ggggcactgtatatcgagcggcctgctgatgtagaagagggtttctctgtccaggccccc
ttggtctatcactttggctccaccactccaggcaccaacatcaaactctataacaagatc
acatctcgcttggctgacgtctttaaccagcgctgcgaagtgaaccgccgggcttcagtt
agtggctgcgtcatcaacacgtgcggctgggtgaagggctccgggtaccacgccctggtg
catgctgcctcagcctttgaggtggatgtggtggtagtgctggaccaggagcgcctatac
aatgagctgaagcgggacctgccccattttgtgcgcacagtgttgctccccaaatcgggt
ggggtggtagagcgctccaaggacttccggagggagtgccgggatgaccgcatccgtgag
tacttctacggcttccgtggctgcttctacccccacgccttcgacgtcaaattctccgat
gtcaagatctacaaggtgggggctcccaccatccctgactcatgcttgcccctgggcatg
tcgcaggaggataaccagctcaagcttgtgccagtgacgccaggccgtgacatggtgcac
cacctgctgagcgtcagcactgctgatggcagtgaggagaacatctccgagaccagcgtg
gctggcttcatcgttgtcactggggtggacgtagatcgccaggtcttcacagtgctgtca
ccggcacctcgcccactgcccaagaactttctgctgatcatggacattcgcttcatggac
cttaagtag
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