Chrysemys picta (western painted turtle): 101942357
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Entry
101942357 CDS
T04662
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic00100
Steroid biosynthesis
cpic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101942357 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cpic01006
]
101942357 (FDFT1)
Enzymes [BR:
cpic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101942357 (FDFT1)
Prenyltransferases [BR:
cpic01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101942357 (FDFT1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
CNV-Replicase_N
SCC3_C
Motif
Other DBs
NCBI-GeneID:
101942357
NCBI-ProteinID:
XP_008170096
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Position
3:138510578..138537470
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AA seq
431 aa
AA seq
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MPLSFIPRCARLPMERVGKWLGRPREIYNLLRFKMGGGAAVMPPLDQDALSDNLKTCYKH
LNQTSRSFAAVIQALDGELRHAVCILYLVLRALDTVEDDMTISLETKVPMLHDFHSYLYQ
PDWRYVESKEKYKQVLEDFPTISLEFRNLAKVYRDVIADICHKMGAGMAEFLQKKVDSLQ
EWDKYCHYVVGLVGIGLSRLFSVLELEDPIIGQDTELANSMGVFIEKTIIIRDYLEDQLA
GREFWPREVWSRYAKKLSDLAKPENIDMAVQCMNELITNALHHVPDVLTYLSRLKTQSVF
NFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKSIMYQYMEEIY
RKIPSTDPSSNKTRQIIVSIQTICLPKGTVVYRNHYSPIYLSCAMLLAALSWQYLSAMSE
ALEEDVQANEY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtcattcatccccaggtgcgcgcggctgcccatggagcgggtggggaagtgg
ctgggccgcccccgggagatctacaacctgctgcggtttaagatgggcggcggcgcagcg
gtgatgcccccactggaccaggacgcgctcagcgacaacctcaagacctgctacaagcac
ctgaatcagaccagccggagcttcgccgccgtcatccaggccctggacggggagctgcgt
catgctgtgtgcatattgtacctggtactccgagctctggacactgtagaagatgatatg
accatcagtttagaaaccaaggtcccaatgttgcatgacttccactcctatctgtatcag
ccggactggagatacgtagagagcaaggagaagtataagcaagtgcttgaggacttccca
acgatctccttggagttcaggaacctggcaaaggtgtatcgagatgtgattgcagatatt
tgtcacaagatgggagctggaatggcagagttcttgcaaaagaaggttgattccctgcaa
gagtgggataagtattgtcactacgttgttgggctggtgggcattggcctttcccgtctg
ttctctgtgctggagctagaagaccctatcataggacaggacacagagcttgcaaattcc
atgggtgtcttcattgagaaaaccatcatcatccgtgattatctggaggaccagttggca
ggaagagaattctggcccagagaggtttggagcaggtatgccaagaagctgtcggatctc
gccaagccagagaacattgacatggccgtccagtgtatgaatgaactgatcacaaatgca
ttgcaccacgtccccgatgtcctcacctacttatctagactgaaaacccaaagtgtcttc
aacttctgcgctattccgcaggtgatggccatcgccactctggcggcctgttacaataac
aaacaggtgtttaggggggtggtgaagattcggaaaggacaagctgtcactttaatgatg
gatgccacaaacatacaggctgtcaagtctataatgtaccagtatatggaagagatctac
cggaagatcccaagcacagacccgtcttctaacaagacccggcagatcattgtctctatc
cagacaatatgtttgcccaaaggcacggtggtctaccgtaaccattactcccccatctac
ctctcatgcgccatgcttctggcagccctgagctggcagtatctgagtgcgatgtcagag
gcgttggaagaggacgtacaggccaatgagtactga
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