Chrysemys picta (western painted turtle): 101951836
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Entry
101951836 CDS
T04662
Symbol
MSH6
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101951836 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101951836 (MSH6)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101951836 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
101951836
NCBI-ProteinID:
XP_005308108
LinkDB
All DBs
Position
Unknown
AA seq
1352 aa
AA seq
DB search
MSRQSTLLRFFPKARAPGVGPAQAPSPPAAARRRGWACSEAAGDEAALAPGGGAAEMGQS
GGVEAQGARKGRTKAARAPSVSCDYSPGDLVWAKMEGYPWWPCLVYNHPTEGTLVRAKGK
SSRVHVQFFDDSPTRGWVSIKYLKPYKGSAVRETQRGGMFYSSKPEIKRAMEMADDAMRK
DKTKRLELAVCNEPSDTEDEEEMEVSESASGNSEDYDSEEEEKKKSLASKWRSGGKAKKR
RVVDSDSDNEGSDEEFKPDAKDEASSDEASSGMGEGESASSETDTKLDVDSPVTVPSKRK
RETDHKPAKRNSLENDLSEAPKRAVTVSLETKSRLTSFAAPENFESQPNVSSSAIWEHDK
LEWLQEGKKRDGCRRRQSDPHYDPCTLHVPEDYLNKCTPGMRKWWQLKSQNFDAVIFYKV
GKFYELYHMDAVTGVNELGLIFMKGIWAHSGFPEIAFGRFSDVLVQKGYKVVRVEQTETP
EMMEARCRSLAHPTKFDRVVRREICRIITKGTQTYSVLDGDPSENLNKYLLSVKEKVEDS
SGHHRAYGVCFVDTSVGKFYVGQFPDDRHCSRFRTLMAHHTPVQILFEKGNLSADTHKIL
KGSLSSSMQEGLISGSQFWNASKTLKTLIEEGYFEDKQNVDNRFILPPVIKSMTSESDSL
GLTPGENCELALSALGGCVFYLKKCLIDQELLSLANFEEYVPVDTDVAKAKGSSSFFAKT
NQRMVLDGVTLANLEILQNGTTGTTEGTLLERIDICCTPFGKRLLKQWICAPLCNPHTIN
DRLDAVEDLLAVPDKMFEVSELLKKLPDLERLLSKIHSIGSPLKSETHPDNRAIFYEETR
YSKKKITDFLSALEGFKVMLETIGIMEEIAADFKSKILKQLVTLKSKNPEGCFPDLSTEL
KRWDTAFDHNEARKTGVITPKAGFDPDYDKALKDIIDIEENLREYLDKQRKRLGFKAMLY
WGAGKNRYQMEIPENAISHNLPEEYELKSTRKGYKRYWTKEIEKMLAEMVNAEERRDAAL
KDCMRRLFHNFDKNSKDWQTAVECFAVLDVLMCLANYSQEGDGPFCRPVILLPEQNTPPF
LELKGSRHPCITKTFFGDDFIPNDIVIGSKNEDEDSNSEAYCVLVTGPNMGGKSTLMRQA
GLLAIMAQLGCYVPAEACRLTPIDRVFTRLGASDKIMSGESTFFVELSETSSILRHATEH
SLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYYSLVEDYSHSAAVRLGHM
ACMVENESEDPSQETITFLYKFIRGACPKSYGFNAARLANIPEEVIQKGHRKAQDFEKVT
LSLRLFRHLCLVAENAAGDKAVPKLMTVINNL
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcaaagcaccctgctccgcttcttccccaaggcccgggcgccaggcgtcggt
ccggcccaggccccttctcctccggccgcagcgaggcggaggggctgggcctgcagcgag
gcagccggggatgaggcagccctggctcccggcggtggcgcggcggagatgggacaatcc
ggcggagtcgaggcccagggggcgaggaaggggagaaccaaggccgcccgggcccccagt
gtctcctgtgattattcacctggtgatttggtttgggccaagatggaagggtacccctgg
tggccatgtcttgtatacaaccacccaactgaaggaactctagtcagagcgaaaggaaaa
tcctctcgtgtacatgtacaattttttgatgatagcccaacaaggggctgggttagcatt
aaatacttaaagccatataaaggctcagcagttagggaaactcagaggggaggtatgttt
tacagttcaaagcctgaaattaaaagagcaatggaaatggcagatgatgctatgcgcaaa
gataaaacgaagcggcttgaactggcagtgtgcaatgaaccttcagatactgaagatgag
gaagagatggaggttagtgaaagtgcgtcgggcaacagtgaagattatgatagtgaggag
gaggagaaaaaaaaaagcctggcaagcaagtggagaagtggtgggaaagccaaaaaacga
agagtggtggactctgacagtgataatgaaggttcagatgaagagtttaagccagatgct
aaagatgaagcaagcagcgatgaagcaagcagcggaatgggcgaaggtgaatctgccagt
tctgagacagacacaaagctggatgtagatagtcctgtgacagtcccttctaaacgaaag
agagaaactgaccacaaacctgctaaaaggaatagcttggaaaatgacctttctgaagca
cccaaaagagcagtaactgtttcattagaaaccaagtcaaggctgacctcttttgcagcg
cctgaaaactttgagtctcagccaaatgttagcagttctgctatatgggaacatgataaa
cttgaatggcttcaggaagggaaaaagagagatggatgtagaagaagacaaagtgatcct
cattatgacccatgtaccctccatgtgccagaggactaccttaacaagtgtaccccagga
atgcggaagtggtggcagctaaagtctcagaactttgatgctgtaatcttctacaaagtc
gggaagttctatgagttgtatcatatggatgcagtcactggtgtaaatgaactgggactg
atatttatgaaaggtatttgggcccattcaggttttccagaaattgcatttggcagattc
tctgatgttctggtacagaagggttacaaagtagtccgggttgagcagacagagactcct
gagatgatggaggcacgctgcagatccctggcccacccaacaaagtttgatagggttgta
cgcagagaaatatgcaggataattaccaaagggacacagacctacagtgttctggatgga
gacccttctgaaaaccttaataaataccttctcagtgtaaaagaaaaagttgaagactct
tctggccaccaccgtgcatatggtgtctgttttgttgacacatcagtaggaaaattttat
gtgggccaatttccagatgaccgccactgctcaaggtttagaactttgatggcacaccac
actcctgtgcagatcctgtttgagaagggaaatctgtctgcagacacacacaagatatta
aaaggctcactctcttcttccatgcaagaaggcttgatctctggctcccagttctggaat
gcatctaaaacactgaaaactctaatcgaagaaggatactttgaggataagcagaatgtt
gataataggtttattctgcctcctgtgatcaaatccatgacctcagaaagtgactctctg
ggtcttactcctggtgaaaactgtgagttagctttgtctgctctcggtggatgtgtcttc
tacctcaagaaatgccttattgaccaggagctcttatctctggcaaactttgaagagtat
gttcctgtggacactgatgttgccaaagctaaaggatcaagcagtttctttgctaaaact
aatcagcggatggtgctggatggggtgacactagcgaacttggaaatcctgcagaatgga
actactggcaccacagaaggcacattattggaaaggattgacatttgttgtacccctttt
ggaaagcgactcctgaaacagtggatatgtgcgcccctctgtaatccccacactatcaat
gatcgtttggatgcagttgaagatcttctggcagttcctgataaaatgtttgaagttagt
gaacttctgaagaaacttccagaccttgaaaggctcctgagcaaaattcacagtattgga
tcaccacttaaaagtgagactcatccagacaatagggctatcttttatgaagaaaccaga
tacagcaaaaaaaaaatcactgacttcttgtctgcgctggaaggatttaaagtaatgctt
gagaccatagggattatggaagaaattgctgctgatttcaaatctaaaatacttaagcag
ttagtcaccctgaagtctaaaaatccagagggttgtttcccagacctgagtacagaactt
aaaagatgggatactgcttttgaccataatgaggctcgaaagactggagtgattactccg
aaggctgggtttgaccccgattatgataaagcactaaaggatattatagacattgaagag
aatcttcgggagtatttggataaacaacgcaaacgacttggattcaaagccatgctgtat
tggggagcaggcaaaaaccgctaccaaatggaaatcccagaaaatgcaatatctcacaat
ttgcctgaggaatatgaattgaagtccaccagaaagggttataaacgttactggaccaag
gagatagagaagatgctggcggagatggtcaatgccgaagaacggagagatgcagcgctg
aaagactgtatgaggagactattccacaattttgataaaaatagcaaagactggcaaaca
gcagtggaatgctttgctgtattagatgtcttgatgtgcctcgctaactatagtcaagaa
ggtgatggaccattctgccgacctgtaattctactgccagaacagaatactccacccttc
ttggagcttaaaggttcacgccatccatgcattacaaaaacatttttcggggatgatttt
attcctaatgatattgtgataggttccaagaatgaagatgaagacagcaatagtgaagcc
tactgtgttttagtaactggcccaaacatgggtggcaaatctacactaatgagacaggct
ggccttttggcaataatggctcagttgggatgctatgtacctgctgaagcttgcaggctt
actcctattgacagagtatttacaagactaggtgcttcagacaaaattatgtcaggagag
agtaccttttttgttgagctgagtgagacttccagcatactccggcatgcaacagagcat
tcccttgtgcttgtggatgaactaggaagaggcacagctacttttgatggtacagctata
gcaagtgcagttgttaaagaacttgcagaaaatataaagtgtcgcacgcttttttccaca
cactattattcattagtagaggactattcacacagtgctgctgtgcgactgggccatatg
gcatgtatggttgaaaatgagagtgaagatccaagccaggaaactattacattcctctat
aaattcattagaggagcttgtcctaaaagctatggtttcaatgcagcaaggcttgctaat
attccagaggaagttattcagaaaggtcacagaaaagcacaagactttgagaaagttaca
ctctcactgagactgtttaggcacctttgcctggtggctgagaatgcggcaggagataaa
gctgttcctaaactgatgactgtaatcaataatctgtaa
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