Campylobacter pinnipediorum: CPIN18020_1089
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Entry
CPIN18020_1089 CDS
T05033
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpin
Campylobacter pinnipediorum
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpin03009
]
CPIN18020_1089
Enzymes [BR:
cpin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CPIN18020_1089
Ribosome biogenesis [BR:
cpin03009
]
Prokaryotic type
ribosomal protein modification factors
CPIN18020_1089
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
CLP1_P
TRAM_2
NTPase_1
HAT_KAT11
Motif
Other DBs
NCBI-ProteinID:
AQW86283
LinkDB
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Position
1069154..1070461
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AA seq
435 aa
AA seq
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MQKVHLISLGCNKNLVDSEIMLGRLKNYSITDDVNSADVIIVNTCGFIESAKQESIQTIL
EVAESKKQDATLVVTGCLMQRYKEELIKELPEVDLFTGVGDYDKIDEILLKKTNLFSPDT
YLQSTEDRVITGSNYHAYIKISEGCNQRCSFCAIPTFKGKLKSRNLEDIVDEVKKLVQKG
FYDFSFLSQDSSSFLKDKSTNDGLIKLIDAIEKIDGIKSARILYLYPSTTSNELISKIIS
SNVFHNYFDMPIQHISDNMLKTMRRGSGEKRLRELLDMMRKAPNSFLRTGIIIGHPGETN
EDFDTLCEFLSEFSFDRVSAFAYSKEEDTKAYEMEQVPTKIVSQRLSKIEKIIDKTISKS
LDSMIDKEYIVTLDGVSSEGEMFFGAKLDIWDKDIDGEVLINESDISDLQVGKRYICKIT
QRADKKLLGTILKEV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagttcatctaatatcacttggttgtaataaaaatttagtagatagcgagata
atgcttggtcgtttaaaaaactatagcataacagatgatgtaaatagtgctgatgttatc
atagtaaacacatgtggttttatagaatcagcaaaacaagagagtatacaaaccatactt
gaagtagcagaaagcaaaaaacaagacgctactcttgttgtaactggctgtttgatgcaa
agatacaaagaggagcttataaaagaactacctgaagttgatttgtttactggtgttggg
gattatgataagatagatgaaattttactaaaaaagacaaatttatttagccctgataca
tatctgcaaagcacagaagacagagttataacaggttcaaattatcacgcatatataaaa
atttcagagggttgtaatcaaagatgtagtttttgtgctataccaacctttaaaggaaaa
ttaaaatcaagaaatttagaagatattgtagatgaagtaaaaaagctagttcaaaaaggc
ttttatgattttagctttttatctcaggactctagctcttttttaaaagacaaatcaaca
aacgatggcttaataaagcttattgatgccatagaaaaaatagatggtataaaaagcgca
agaatactatatctttatccaagcacaacatcaaatgagttaatttcaaaaataatatct
tcaaatgttttccataactattttgatatgcctatacaacatataagcgacaatatgcta
aaaacaatgagaagaggaagtggtgaaaagaggctaagagagcttttggatatgatgaga
aaagcaccaaattctttcttaagaactggaatcataataggccatccaggagaaaccaac
gaagactttgacacactatgtgagtttttaagtgagttttcatttgatagagtttcagca
tttgcttactcaaaagaagaggatacaaaagcttatgaaatggagcaagttccaacaaaa
atagtatctcaaagattaagcaaaatagagaaaatcatagacaaaacaatatcaaaaagt
cttgatagtatgatagacaaagaatatatcgtaacacttgatggagtaagtagcgaagga
gagatgttttttggagctaaacttgacatatgggataaagatatagatggcgaggttttg
ataaacgaaagtgacattagtgatttgcaagtaggaaaaagatatatttgcaaaataaca
caaagagccgataaaaagttacttgggactattttaaaagaagtttaa
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