Chiloscyllium plagiosum (whitespotted bambooshark): 122544252
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Entry
122544252 CDS
T08871
Symbol
prdm9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00310
Lysine degradation
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122544252 (prdm9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122544252 (prdm9)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122544252 (prdm9)
Enzymes [BR:
cpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
122544252 (prdm9)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122544252 (prdm9)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122544252 (prdm9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122544252 (prdm9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
KRAB
SET
FOG1-like_PR
zf_PR_Knuckle
Herpes_ORF11
Motif
Other DBs
NCBI-GeneID:
122544252
NCBI-ProteinID:
XP_043539263
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All DBs
Position
47:complement(9672549..9698462)
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AA seq
419 aa
AA seq
DB search
MRAADFDGWEPRAGEREDLLKKNGRQLSQIKDQFKDITHHFSKEEWAELSEWEKVRYKNV
KRNYEAMLAIEYAVFASPPDAIMCLLSMYELGAEPSVEELSKAIDSLASEVRTFKPPFKN
DGTKKTKKDNSKKNEKRQLANASHLQEDKDAGLRSFNEGTPSVLEETVSVKKRNRETNTA
MSEFEAQNESIKVVCAGKTLESSSEETHNEKEERRYSLRNKERKIYTEERELCDEDFLFC
EDCKRFFVEECPVHGPPVFIKDMAVEFNQPDRARLTLPEGLSIAISKIRKAGLGVWNEGK
AIPKGVHFGPYEGVTSNEESAAVSGYSWVISKGKQDFEYIDAKDESKSNWMRFVNCARKE
EEQNLVAFQHHGKIYYRTCKRVPPRCELLVWYGDEYAKELGINWTAMWMMKQNPKEHRE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggctgacttcgacggttgggagccgcgcgcgggagagcgcgaggatcttttg
aagaaaaacggccgccaactgtcacagattaaagaccaatttaaagacattacccatcat
ttttccaaagaggagtgggcagagctaagtgaatgggaaaaagtacgttataagaatgtg
aagaggaactatgaggccatgcttgcaatagagtatgccgtattcgcttcaccacctgat
gccatcatgtgcttgctgagcatgtacgaattaggcgcagagccatcagtagaagagctc
agcaaggccattgacagcctggcctcagaggtgagaacctttaagccacctttcaagaat
gatggtaccaagaagacaaagaaagacaacagcaaaaagaacgagaaaagacaattagca
aatgcatcccatttacaggaggataaagatgcaggtttaaggagcttcaatgagggcact
ccctcagttctggaagagacagtttcagttaaaaagagaaaccgagaaactaatactgcg
atgagtgaatttgaggctcaaaatgaatccatcaaagttgtctgtgctggaaagacgttg
gaatcttcaagtgaggaaacacacaatgaaaaggaagagagaagatacagtttgagaaat
aaagagagaaagatttacacagaagaaagggaactttgtgatgaagattttctgttttgc
gaagactgcaaaagattttttgttgaagagtgtcctgtgcatggtcctccagtgttcata
aaggacatggctgttgaattcaatcaaccagatcgagcacgtttaacccttccagagggc
ctcagcattgcgatatcaaaaattagaaaggctggtcttggtgtgtggaatgaaggaaag
gctattcctaaaggagttcattttggaccctatgaaggagtcacatcaaatgaggaatca
gctgctgtcagtggctattcatgggtgatcagtaaaggaaagcaagattttgaatacatt
gatgcaaaggatgaatctaaatcaaattggatgagatttgttaactgtgccagaaaggaa
gaggagcagaaccttgtagcctttcagcaccatggcaaaatttattacagaacctgcaag
cgtgttcctcctcggtgcgagctgctggtctggtatggtgacgaatatgccaaggagctt
ggaatcaattggacagcaatgtggatgatgaaacaaaatccaaaagagcacagagagtga
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integrated database retrieval system
