Chiloscyllium plagiosum (whitespotted bambooshark): 122555338
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Entry
122555338 CDS
T08871
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00780
Biotin metabolism
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
122555338 (hlcs)
Enzymes [BR:
cpla01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
122555338 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
122555338 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
122555338 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
122555338 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
122555338
NCBI-ProteinID:
XP_043557165
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All DBs
Position
12:61710382..61872859
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AA seq
909 aa
AA seq
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MLITLCYVYLWIRLQKCYAMIIFRAVRRFHRMSSLTFTALTPDSESRPHSPSTVVQENVC
VRLADRAFLLAEPQKLCDDLSKWSLRPEPVIARTEHKQRAQQITFLIEAILGSASFDSIS
VSSEKLLRYSDFCVPLAYLLGNPYKLIAEANVDDFSRLGVAFMENRLQMDDGMVPQKIVS
LQLNEPVQMKLLESSAMFQKEWKEIGHLQDLDIAMEPCHKHPLIKPATEQNMGLCGDRCC
TVGSACQPEMDELKAVHSKEFHMAQEAKELEEHEGYGLHLASCSECLELENSTIESVKYA
SAENLLDLPDDYCGSSDETVVGEDSFMVNAGQSNKNGKPPNVLIYVGSDYSQYLVKFQQI
KSVLLDCLDNESYVIYPLLEEQVLKVPWVDNSLLLVVACDDPVPEQIHAKFMTYLSKGGK
ILGLCTSFSFGEIKVAVKKELKGKIHRWFFTKSDSKDITLHAFTSGKAFLRETSSTEEAT
EDLELWGSLANPEKDIVIVRLPYGENGGEAVLCQVHLEIPPDSKETQLQQDFRTLKLSNA
LRYEVLTEILTYLQLSCELSEVPPLTPVYLLAAGEDIRRTFLRWLWPRLDMEGVFKSQKV
SLKVVTMQQPGMEITPNTLPVIIESQKFSSEYFDLKMYCENLQTKVLGQLVFFSEVIITT
MDLFDGLMPSLPKEVGLIAVAVRQTQGKGRGGNIWLSPIGCAMFTLHVRIPTQSKLGQNI
SFIQHLMALAAVESVISMPGYEDIDLRLKWPNDIYYSNLMKLGGVLVNSTLMGATFHVLV
GCGFNVSNSNPTICINDIIQQHNKENGTDLQTLRIDLLIARTVTIFENLISIFQDKGPNG
VLPLYYKRWLHSGTKVRLWKEDGPAAWVIGLDDSGFLLVQQENDEDIVTVQPDGNSFDML
RNLMITKHH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgttgataactctgtgctatgtttacctgtggattcgcctgcagaaatgctatgcaatg
atcatctttcgggctgtacggcgcttccaccgcatgtccagccttaccttcaccgcgctg
accccggacagcgagagccggcctcacagcccttctacagttgtccaggaaaacgtctgt
gtccgtctggctgatagggctttcctcctggctgagccccaaaagctttgtgatgacttg
agtaaatggtcactgcgccctgaacctgtgatagctcgcactgaacacaaacagcgggca
caacaaataacttttctgatagaagctatcttgggaagtgctagttttgattcaatctct
gtttcttctgaaaaactcttaagatattctgacttctgcgtaccattggcatatttactt
ggcaacccatacaaactaattgctgaagcaaatgtagatgattttagcagacttggagtt
gccttcatggagaacagactacagatggatgatggaatggtacctcaaaaaatagtttct
ctccagctcaatgaacctgttcaaatgaaattgctcgaatcaagtgccatgtttcaaaaa
gagtggaaagagattggtcatctccaggatcttgatattgcaatggaaccatgtcataag
catcctttaatcaaaccagcgactgaacaaaatatgggtttgtgtggtgatcgctgttgt
acagttggttctgcttgtcaaccagaaatggatgaacttaaggcagttcacagtaaagag
tttcatatggcccaagaggcaaaggaactcgaggaacatgaaggctatggccttcacctt
gccagttgctctgagtgtttggagttggaaaacagcaccattgagtcagtcaaatatgcg
tcggcagaaaatctattggacctccctgatgattattgtggaagctctgatgaaacagtg
gttggggaggacagttttatggtaaatgcaggacaaagcaacaaaaatgggaaacctccc
aatgtattgatctatgttggatcggattacagtcaatatttggtaaaatttcagcaaata
aaatccgtcctgttggattgccttgacaatgaaagctatgtgatctatccacttctagag
gaacaggttctaaaagttccttgggttgataattctttattgttggttgtggcgtgtgac
gatccagtgcctgaacagattcatgcaaagttcatgacttacctatccaaaggtgggaag
atcttgggactctgtacatcattttcatttggtgaaattaaagtagcagtcaaaaaagaa
ctgaaaggaaagattcacaggtggttcttcactaaatctgacagcaaggacataaccctc
catgcttttaccagcggcaaagcattcttaagagaaaccagtagtacagaggaagccact
gaagatcttgagctgtgggggagtttggctaatcctgaaaaggacatcgtaattgtacgt
ttaccctatggagaaaatggaggagaggctgtgctctgtcaggttcaccttgaaattcct
cctgattcaaaagagacccaactgcagcaggattttagaacacttaaactgagcaacgca
ctgcgatatgaagtactgacagaaattctgacatatttgcaacttagctgtgaacttagt
gaagttccacctctgacaccagtgtaccttctggctgcaggagaggatattcgacgaact
ttcctaagatggctatggcccagattggacatggaaggtgtatttaagtcacagaaagta
tctttaaaagttgtaacaatgcagcaacctggaatggagatcacacctaacaccttgcct
gtcatcatagaatcgcaaaagttctcatcagaatattttgacctcaaaatgtactgtgaa
aatctgcaaactaaggtgttaggtcaactagttttcttcagtgaagtgatcataactaca
atggacctgtttgatgggttgatgccttcgttgccaaaagaagtagggttaattgctgtt
gcagttcgacaaacacaaggcaaaggtcgtggaggaaatatatggcttagtccaataggc
tgtgctatgtttactctacatgttaggattccaacccaatctaagcttggacagaacatt
tcttttatacagcacttgatggctctggctgcagtggaatctgtgatatctatgccagga
tatgaggatattgatctgaggcttaaatggccgaatgatatatactatagtaatctcatg
aagctaggtggagtcctggttaactctactttgatgggagcaacttttcatgtacttgtt
ggctgtggattcaatgtaagtaacagcaacccaactatttgcatcaatgatatcatccag
caacataacaaagagaatggaacagatttgcagacacttcgtatagacctgctgatagct
aggacggtcactatctttgaaaatctgatcagcattttccaggacaaaggaccaaatgga
gttttaccactctactataaacgatggttacacagtggcacaaaagtacgactgtggaaa
gaagatggtccagcagcatgggttattggtctggatgattctggctttcttctggttcag
caggaaaatgatgaagatattgttacagtgcagcctgatggaaactcattcgacatgttg
cgtaacttgatgatcactaagcatcattaa
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