Chiloscyllium plagiosum (whitespotted bambooshark): 122557047
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Entry
122557047 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-4-like isoform X1
KO
K05185
gamma-aminobutyric acid receptor subunit epsilon
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122557047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122557047
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122557047
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122557047
NCBI-ProteinID:
XP_043560224
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Position
15:2860236..3097114
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AA seq
456 aa
AA seq
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MRAGPWTRSEMSSKLFVLLFLQSAIHASSRIEDEDDDDVGLNKTWVLAPKSQDADATHIL
NSLLSGYDNKLRPDVGIKPIVIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDRRLRFNS
TLKVLTLNSNMVGRIWIPDTIFRNSKRADSHWITTPNQLLRIWNDGKILYTLRLTIEAEC
QLYLQNFPMDEQSCPLTFSSYGYPKDEITYRWRQYSIEVAHQRSWRLYQFDFVRLRNTTE
VLKTTAGDYTLMIVYFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTTLGIT
TVLTMTTLSTISRKALPKVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGTKRPNPTKR
KLKPEASAPGAEPCFTTITMNNLAQWQEPEGELPDDCLEGKDCRSFFCCIEDCQTGTWRR
GRIRIHISRLDAYSRVFFPTAFLLFNLIYWISYLYL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccggcccgtggaccaggtcagagatgtcctcgaaacttttcgtcctccttttc
ctccagtcggccatccacgcgagcagcagaattgaggatgaagatgatgatgatgttggt
ctgaataagacatgggttctcgctcccaagtctcaagatgcggatgcgacacacatactg
aattcactgttgagcggctacgacaacaaattgaggccagacgttggaataaagccaatt
gttattgacgtggacatctatgtgaacagcattggcccagtatcagttatccagatggag
tacaccatcgatatcttcttcgcacaaacatggtatgacagaaggctgcgttttaacagc
acactgaaagtcctgacattgaacagtaacatggtggggcgcatctggatcccagatacc
atattccgaaactcaaagcgggctgattctcattggatcaccacacccaatcaactactg
agaatttggaatgatggcaagatcctctatactctgaggctcacaatcgaggcggaatgc
cagctgtatctgcagaactttcccatggatgagcagtcctgtcctctcaccttctccagt
tatggatatccaaaagatgaaataacctacagatggagacagtactcgattgaagtcgca
caccaacgatcctggagactataccagtttgattttgttcgtctgcggaatacaacagaa
gtcctcaaaaccactgcaggagactacactttgatgatagtttactttgatttaagtcgc
agaatgggatattttgcaatacagacctatatcccctgtatactgactgtagtcctatca
tgggtctcattttggatcaagagagattcaactcctgccagaaccacactcgggatcacc
actgtgctgaccatgaccacactgagcactatttccaggaaagcattgccgaaggtctcc
tatattactgccatggacctcttcgtgtccgtctgtttcatctttgtcttcgcggcactc
atggagtacgccaccctcaactatctcgtagggaccaagagacccaaccccacaaaacgc
aaactcaaacctgaagccagtgctccaggtgcagaaccctgcttcaccaccatcactatg
aacaacctggcacagtggcaggagccagagggggagttgcctgatgactgtctagagggt
aaggattgccgctcattcttctgctgtatcgaggattgccagactggcacgtggcgccgg
ggccgcatccgcatccacatctccaggctggatgcctactcccgggtcttcttccccaca
gcctttctactcttcaatctcatttactggatctcatacctctacctgtga
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