Chiloscyllium plagiosum (whitespotted bambooshark): 122558624
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Entry
122558624 CDS
T08871
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03020
RNA polymerase
cpla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122558624 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
122558624 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122558624 (polr2c)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122558624 (polr2c)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122558624 (polr2c)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122558624 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
122558624
NCBI-ProteinID:
XP_043563348
LinkDB
All DBs
Position
17:72370919..72384157
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AA seq
275 aa
AA seq
DB search
MPYANQPTVRITELSDENVKFIVENTELSVANALRRVLMAEVATLAIDWVQIDANSSVLH
DEFIAHRIGLIPLTSDDIVDKMQYSRDCTCDEFCPECSVELTLDVKCNEDQTRHVTSRDL
LSNNSRVIPVTSRSRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPKPEEWPKSEYSELDEEEIQAPYDPNGKPERFYFNVESSGALH
PETIVLSALSGLKKKLSDLQTMLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgcgaaccagccgacagtgcggatcacggagctgtctgacgagaatgtgaag
ttcatcgtggagaacaccgagctgtcagttgcaaatgcattgcgacgagttctcatggca
gaagtggcaacattggcaattgactgggttcagatcgatgctaattcctctgtactacat
gatgaattcattgcacacagaattggattaatccccttaacgagtgatgacattgtggat
aagatgcagtattcaagggactgtacgtgtgacgagttctgcccggaatgttcagtggag
ctgacactcgatgtgaagtgtaatgaagatcaaactcgacatgtcacctcacgggatctc
ctctccaataattcccgtgttatccctgtcacatctcggagcagggacaatgatccaaac
gattatgtggaacaggatgatattctgattgtgaaactacgcaaaggccaggagctgagg
ctccgagcttatgccaagaaggggtttggaaaggaacatgccaagtggaatcccactgca
ggagtgtccttcgaatacgaccctgacaatgcactgaggcacactgtctaccccaaacct
gaggaatggccaaaaagtgagtactctgaacttgatgaagaggagatccaggctccctac
gacccaaatggcaaaccagagaggttttatttcaacgttgagtcttcaggagctctacat
cctgagacaatcgtcctgtctgctctgtctggcctcaagaagaagctgagtgacctgcaa
acaatgctgagccatgaaatccagagtgatgtcctcaccatcaactag
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