Chiloscyllium plagiosum (whitespotted bambooshark): 122560529
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Entry
122560529 CDS
T08871
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122560529 (cacna1ha)
04020 Calcium signaling pathway
122560529 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122560529 (cacna1ha)
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122560529 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122560529
NCBI-ProteinID:
XP_043567173
LinkDB
All DBs
Position
21:complement(10823300..11117993)
Genome browser
AA seq
2301 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECKSERCTILKAFDDFIFAFFAVEMVTKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMLEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFFEDSFAMYYNVSLPPNYQIEGDETP
FICSLPRDNGMQKCQDLPNLKENGVECFLTLDSYNHPRYSLEMDNASGCINWNQYYNVCR
TGDVNPHKGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSF
FMINLCLVVIATQFSETKQRENQLMQEQRARFLSNDSTIASFSEPGSLYEELLKYICHLF
RKMKRRTLRLYNIWQNKQHKKVTPNSSNGQERKWQNKSRVRSIHHLIHHHHHHHHHHYHI
SNGNSKAQQGSPELCEMEIKSLRAGSKLMLPSSALNHQSPSSGTESVHSIYHADCHFEGP
QMTYKSSATTNVKLMTGLTHHGGMNYPTIVPSVTSRSSCTPKLKGNSSRNTLITVGRGNP
NMNLADSYGKLHHFVGEQGVFQAASKLSGLNVSCSTPNAQAGILTCDLQNCPYCAHALEN
PDLELSDSESCDSDADGVYEFTQDITQGDQRDQRHKNKNKPKEKNKLILLCTLISEKMKR
IVGSKYFNRGIMIAILINTLSMGIEYHEQPEELTNALEISNIVFTSMFALEMILKLFAFG
LFGYIKNPYNIFDGIVVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVL
MKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKMENGDTIPDRKNFDSLLWAIVTVF
QILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSD
TDEEKTSANFDEECERFKDHSSDLKMYSVVMTSNGHLDSRSSIPPPIIMHTAATPMPTPK
SSPYMDSVHTYLESRRGSSASIDPTNYDQRSLSSIRSSPCAPWGTNSNWGSRRSSWHSLG
RAPSLKRKNQSDERESLLSGVGHESCGEDDESEDAKSSKAGSLSGCSLHHRAESFDTKGS
IDLPELLQVPVMRHPVTFNPMSTMPCDYQDCNGKSLPISNEIFPRMDNLKDDPNDYEDEI
DNSYCFRVWQFLEPYKPTWCKTHEDWALYLFAPQNRFRIMCQKIIAHKMFDHVVLVFIFL
NCITIALERPEIDPNSTERMFLSVSNHIFTAIFVVEMALKVMALGFFSGENAYLQSSWNI
LDGILVFVSVIDIIVSLASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITS
LRPIGNIVLICCAFFIIFGILGVQLFKGKFYHCDGHDTRNITNKSECVQANYKWVRRKYN
FDNLGQALMSLFVLSSKDGWVNIMYDGLDAIGIDKQPQRNHNPWMLLYFISFLLIVSFFV
LNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPARLYIHK
LCTNHYLDLFITFIIGINVITMSMEHYHQPPSLEEALKYCNYVFTIVFVFESILKLIAFG
FRRFFKDRWNQLDLAIVLLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMA
TGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGLSRHATFE
NFGMAFLTLFRVSTGDNWNGIMKFVLVNVVVAVLMKHLEESNKEAKEDAELDAEIELEMS
QAQGASSSNIGQTPILDSKATGAGQESVQLESPVHVKQLMEDLRYSKMIGENQKDNLLTV
RKVSVSRMHSLPNDSYMFRPVRSAQSHYPLHEVDPHQGSVTSIQSQPAEVSTCLGIPTEI
IHHSFASTSHITLPKIPPPQRPPRSPSFNRLLRRQESVRNDSVGVMNVESKNSLKLESND
NLQPKLSAHHILVPPLMHSTPLSPKVAAQPLPLLTQRSKQSSVHTHRQVYSQRSIPSRSP
SHSSGSNSPASSFFNSVDPADEEVRCINSSMRNWKRQSEVRSLSLSPFLSLNQSAVALKN
SNSTASLAGIGREKDLKKFYSVDAQGLLAKPSWADDPRRHSIEICPSIDDEDSNLQLEVP
FSTEEKGEPSVHAQSDSEYILAAQRKKKMSPPCISIEPPKESESGPTSHTAMSEARMHLR
KRTLSFESMVHRDSLELVDLQSENQASITDQRIPQSCQSKHLTIPDLSFDHSDVSSLSSL
SDLFSDSNHSTPSSSISADSRVELLASERKKIDHSKASIENRDIHRPENSKEMLSVASTP
LRKRGLVRMTSTQEDTDDLVV
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcatccttttgaattgtgttacgctgggcatgtttcaaccatgtgaagatgtg
gaatgtaagtctgaaagatgtaccattcttaaggcatttgatgactttatttttgcattc
tttgctgtggaaatggtcacaaagatggtggctcttggaatatttgggcagaagtgttac
ctgggagatacatggaatcgtctggatttcttcattgtaatggcaggaatgctagaatat
tcactggatggacacaatgcaagtctctcagcaatccgaactgtccgggttctcaggcca
ttaagagccattaacagagttcctagtatgagaatactagtgactttactactagatact
ctgcctatgttaggcaatgtccttctcctttgtttttttgtcttctttatatttggaatt
gttggcgtgcagctgtgggctgggctgctaaggaacagatgttttttcgaagacagtttt
gcaatgtattacaatgtttctttacctccaaattatcagatagaaggtgatgaaactcca
tttatttgctcactgccacgggacaatggcatgcagaaatgtcaggaccttccaaatttg
aaagaaaatggagtcgaatgttttcttaccttggattcttacaaccacccaagatatagt
ctggaaatggacaatgcaagtggttgcataaactggaatcaatattacaatgtgtgcaga
acgggagatgtaaacccacataagggtgccattaattttgataatataggatatgcctgg
attgccatttttcaggttattaccctggaaggatgggtagacatcatgtattatgttatg
gatgcacattctttttacaattttatatattttatactgcttataatagtcggttcattc
ttcatgattaacttgtgcctggttgtcatagcaactcagttttcagaaacaaagcaacgt
gaaaaccagttaatgcaggagcagcgagcccgctttctttcaaatgatagcacaattgcc
agtttctcagagcctggaagcctctatgaagagctccttaaatacatttgccacctcttt
agaaaaatgaagcggcggacactgcgcctttacaacatttggcagaataaacaacacaaa
aaagtcaccccaaacagttcaaatggtcaagagaggaaatggcagaataaaagtcgtgta
aggtcaatccatcatttaattcatcaccatcatcatcatcatcatcatcattaccatatc
agcaatggtaattcaaaggcacagcaaggcagtccagaactttgtgaaatggagatcaaa
tcgttacgagctggcagtaagcttatgcttccttcatctgcactaaaccatcagagtcct
tcttcaggtactgagtccgttcacagtatttaccatgccgactgccactttgaaggccca
caaatgacatacaagtcttccgctacaactaatgttaaactaatgactggccttacacat
catggaggcatgaactatccaacaatagttccatctgtgactagtagaagcagctgcaca
ccaaaactaaaaggcaacagtagcaggaatacactcattactgtgggcagagggaaccca
aacatgaacttggcagattcctatggcaaactgcaccattttgtgggagaacagggagtc
tttcaagctgcaagcaagttgtcaggactcaatgtgtcatgttccacacccaatgcacag
gctggtattttgacttgtgacctccagaactgcccttattgtgctcatgctttggaaaat
ccagacctagagctcagcgattcagaaagttgtgactccgatgctgatggtgtgtacgaa
tttacgcaagacatcactcaaggtgaccagagagatcagagacacaagaacaaaaataaa
ccaaaagaaaagaataaattaatcctgctatgtacactaatctctgaaaaaatgaaaaga
attgtcggaagtaaatactttaaccgtggaattatgattgccattctgatcaatacattg
agtatgggtattgaataccatgaacagcctgaagagcttaccaatgccctggagatcagc
aacattgtatttaccagcatgtttgctttggaaatgattcttaaactttttgcatttggt
ctttttggttacattaaaaatccatataatatttttgatggaattgttgtcattatcagt
gtgtgggaaattattggtcagtctgatggtggcctttcagtgctgagaacattccggctg
ctcagagttttgaagctagtccgtttcctgcctgcactgcgacgccagttagtggttctg
atgaaaaccatggacaacgtggctacattctgcatgctgctcatgctgttcatatttatt
ttcagtattctgggcatgcatctgtttggatgtaaattcagcttgaagatggagaatgga
gacacaataccagacaggaagaattttgattctttgttgtgggcaattgtcactgtattt
cagatccttactcaggaggactggaatgtagtcctgtataatggaatggcctccacctca
ccctgggctgccctctactttgtggcattaatgacttttggcaactatgtgcttttcaac
ctactggttgctattcttgtggaaggcttccaagcagagggtgatgccaacagatcagat
acagatgaagaaaaaacatctgctaattttgatgaggagtgtgagcgatttaaagatcat
tcttctgatttaaaaatgtattcggtcgtcatgacatcaaatggacatttggattcacga
agcagcataccaccaccaattatcatgcatactgctgctacaccaatgcctacaccaaag
agttcaccatatatggattcagttcatacttacttagaatccagaagaggcagcagtgct
tccattgatcctacaaattatgaccagaggtctttgtccagcattcgcagttcaccttgt
gccccttggggcaccaacagtaattggggtagtcgccgttcaagctggcatagccttgga
agggcacccagcctaaaaaggaagaatcagtcggatgaaagggaatccctgctctcgggt
gtaggacatgaaagttgtggtgaagatgacgaatcggaagatgcaaagtctagcaaagct
ggcagcctcagtggatgctccttgcaccatcgtgcagaatctttcgataccaaaggatcc
atagacttgcctgagctacttcaagtaccagtaatgcgacatcctgtgacctttaatcct
atgagcacaatgccttgtgactatcaagattgcaatggcaagtccttgcctatttcaaat
gagatctttcctcgaatggataatctcaaagatgatccaaacgattatgaagatgaaatt
gacaatagttactgttttagagtgtggcaatttctggagccatacaaaccaacttggtgt
aaaacgcatgaggattgggcgctctatttatttgctcctcaaaaccggttccgcatcatg
tgccagaagattattgctcacaagatgtttgaccatgtagttctggtatttatatttctc
aattgcattacaattgctcttgaaagacctgagattgacccaaacagtacagaacggatg
tttctgagtgtctcaaatcatatcttcactgctatttttgttgttgaaatggctcttaag
gtcatggcactaggattcttttctggtgagaatgcatatctccaaagcagttggaatata
ttggatggcatcctagtttttgtttccgtaattgacataattgtctccctggcatcagcg
ggaggagcaaagatccttggtattctccgtgtattacgactcttgcgaacccttcgacca
ctgagagtcatcagccgagctccaggcctaaaactggtagtagaaacgttaataacttcc
ctgagacccatcggaaatatcgtactcatctgctgtgctttcttcatcatcttcggaatc
ctgggggtccagttgtttaaaggcaagttctaccactgtgatggacatgataccaggaat
attacaaataagtcagaatgtgtccaagctaattacaaatgggtgcgccgtaaatacaat
tttgataatctgggacaggcattgatgtcactctttgttttatcctccaaagatggttgg
gtaaatataatgtatgatggtctcgatgcaataggaattgataagcagccgcaaagaaat
cacaatccctggatgctcctgtacttcatctcctttctcttgattgtgagtttctttgtg
ctaaacatgttcgttggggtggtggtggagaacttccacaagtgccggcagcaccaggag
gctgaggaggcacgccggcgggaggagaaacgtctgcgaaggctggaaaaaaagcgcagg
aaagcccaacgcagaccctattatgctgactactcccctgctcgactttacatccataag
ttgtgcaccaaccactatctggatctattcatcacattcattattggtataaatgttatc
acaatgtccatggagcactaccaccagccaccttcgcttgaagaagctctaaagtattgt
aactacgtgttcaccatcgtctttgtcttcgaatctattcttaaactcattgcatttggc
ttcaggagattctttaaagacagatggaaccaattggatcttgctattgttctgctttca
ataatgggaataaccttggaagaaattgaaattaatgcctccctgcccattaaccccaca
atcattcgcatcatgagggtgctacgaattgcaagagtgctgaaactactcaagatggct
actggaatgagggctttactcgatacagttgtgcaagctttgccacaggttggaaacctt
ggtttattgttcatgcttttgttttttatctatgcggctcttggagttgaactctttgga
aagctggtttgtaatgatgaaaatccatgtgaaggcttgagtcgacatgcaacatttgag
aattttggaatggcatttctgactttattccgagtttctactggtgataactggaatgga
ataatgaagtttgtgcttgtcaatgttgtggttgctgttctaatgaaacatttggaggag
agcaacaaagaagccaaagaggatgcagagcttgatgcagaaatagagctggaaatgtca
caagcccagggagcatcaagtagcaacattggacaaactcctatccttgacagcaaagcc
acgggagctggccaggagtcagtacaacttgaatcaccagtacatgtaaaacaattaatg
gaagatcttagatacagcaaaatgatcggagagaatcaaaaagacaatttgctgactgtt
cggaaagtttctgtgtctcgaatgcattctttacctaacgacagctatatgtttcgccca
gttagatcagcccaatctcattatccgctgcatgaggtggatccccatcaggggtctgtg
acttcaatccagtcccagcctgctgaagtttctacgtgtcttggaattcccactgagata
attcatcatagcttcgcttcgaccagccacatcactctccctaaaatccctcctccacag
agaccaccgagatcacccagttttaacaggctactacgtagacaggagtctgtcagaaat
gactcagtgggtgttatgaatgtggaatctaagaacagcttgaagctagagtctaatgac
aatctgcaaccaaaactttcagctcatcatatcttggttccaccattaatgcactccaca
ccattgtctccaaaggtcgccgctcagcctttgccactgttgacacaacgcagtaagcaa
tcgagtgttcacacacacaggcaggtctacagccagcgcagtattccgagccgctcaccc
agtcacagcagtggcagcaacagcccagcaagctcctttttcaactctgtggatccagct
gacgaagaagtgaggtgcatcaacagctcaatgagaaactggaagcgacaatctgaagtg
agaagcctatcgttatcacctttcctctcgcttaatcagtcagctgtggctttaaagaac
tctaacagtacagcaagcttggcaggaattggaagggaaaaagacttgaagaaattctac
agtgttgatgcacagggattactggcaaaaccttcttgggcagatgatccaaggaggcat
tcaattgaaatatgcccttcgattgacgatgaagattcaaatctacagttagaagttcca
ttttctactgaagaaaagggagagccttctgtccatgcccagtcagattccgagtatatc
cttgcagctcaaagaaagaaaaaaatgagtccaccttgtatctcaatagagcctcccaag
gagagtgaaagtgggccaacttctcatactgcaatgtctgaagccaggatgcatttacgc
aagcgcacactatcctttgaatccatggttcatagagattctctagaactcgtagatttg
cagtctgagaatcaggcatccataacagatcaacgaattccccaatcctgtcaaagcaag
catcttaccattccagacctatcattcgatcactcagatgtgagctcattaagcagttta
tctgacttgttttctgatagcaatcactcaaccccttcttctagtatctctgcagattca
agggtagaattattggcctccgaacggaagaaaatagaccattccaaagcatcaattgaa
aaccgtgatattcataggcctgaaaatagtaaagagatgctcagcgtcgccagtacgcct
cttaggaaacgggggcttgttcgtatgacaagcacacaagaagacacggatgatcttgtg
gtatag
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integrated database retrieval system
