Chiloscyllium plagiosum (whitespotted bambooshark): 122562599
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Entry
122562599 CDS
T08871
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03030
DNA replication
cpla03410
Base excision repair
cpla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122562599 (pole)
03410 Base excision repair
122562599 (pole)
03420 Nucleotide excision repair
122562599 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpla03032
]
122562599 (pole)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122562599 (pole)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122562599 (pole)
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122562599 (pole)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122562599 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
122562599
NCBI-ProteinID:
XP_043571509
LinkDB
All DBs
Position
25:complement(15528262..15685972)
Genome browser
AA seq
2282 aa
AA seq
DB search
MVLQNSGKLRADRQPVADTSYSEDGSSLPALKRLERSQWTDEMDARFGFDRLKDPGEKTG
WLINMHPTELLDEDKRMISAVDYYFIEEDGSRFKVALPFEPYFYVATKKGCEREVSSFLS
KKFQGKISKISTIPKEDLDLPNHLVGLKRLYVKLAFNTVDDLIKVRKEISSAVKKNKERE
KSNDAYTVMLSSALAGGNVTEEEGTSKKISDQMENIIDIREYDVPYHVRVSIDLKIQVAH
WYNIRIRGGAYPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDAENDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEASLIRRWFEHLQETKPNILVTY
NGDSFDWPFVEARAAVHGLNMYKEIGFQKDSQGEFKASQSIHMDCYRWVKRDSYLPVGSQ
NLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTNDGHVLDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEHTMRHAIEEEEKLPMDQVTNFQEVCDE
IKKKLNCLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGAF
CQRKMTWTWRGEFMPASRSEYHRIQQQLESEKFPPTFPNGQPQAFHELSREEQAKYEKKR
LADYCRKAYKKIHITKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGSHKVWKKKLSAA
IESGDATEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGANI
ITQARELIEQIGRPLELDTDGIWCVIPNSFPENFVIKSNNPKKPKVTISYPGAMLNILVK
ERFTNEQYQELVDPASLTYVTRLENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAA
NMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFVISK
KPEGAPVTERAIPLAIFQAEPSVKKYYLKKWLKNPSLQDLDIRLILDWDYYIERLGSAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKISELFTNTGVRQVTCNQHLV
KDQQSQISDLEDFGVPKRRAQPVIPISTKRRRGMNDESQEQSQDLELTQSWREILGPPPP
LGKTKDERLVWLRYQKRKWELQSKQRKARRKRRKLDDGADAPGRPIRDGPTTSLSSFLRR
TARTILDMPWQIVQIAETSQPGIFKLWAVVGHDLHCIKLNVPRVFYVNQRIPKADDSAVY
KKVNRILPRSNIVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQIPLLFRALIQL
GCICMVNRQLSPHLGGREVDTFELEQLEMRSLAQFNYLEPGSIRHIYFYHNAQGSKALFG
LFIPSQRKASVFVLDTVRSNQMPNLNNLYASERTAMLEKLDEELLPPDKHTFEVQAEKDP
KLIYRAIQRLLLSYKDEKRGPTLIAVQSKWQLKRLTNGMSVLDEFPLVPVHVNDDISYGV
LDWQRHGVRRMIRHYLNLDSILSKAFEMARYYHIPIGNLPDDISTFGSDLFFSRHLRRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDEKSTVEINNPGCYSTVSVELDIQSLAVNTILQ
SHHINDMEGASSIGISFDVIQQASLEDMMAGNQAANALASYDEAALCSNTFRILKSMVVG
WVKEITQYQNVYADNQVMHFYRWLRSPSSLLYDPALHRILHNMMKKLFLQLVAEFKRLGS
SVIYANFNRLLLCTKKRRIEDSMGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDPAN
YAGIKGKLSSSILIGEVESNKGTKENVEDDSNDDEEIHSEDEETGTDVEDLLDNNWNIMH
YLPQASSCQSYFLMIVSAYIVAVYHSMKEELRRSAPGCTPIKRRGTSQISQEPAGDTGAS
AGMITFSQEYVSNELTHNFFTITQKILKKVSSNRHSTEPSEMFPVLPGSYLPFNNPALEF
IKSVCKILSLDSNITNQVNKLKRDLLRLIDVGEFSEEAQFKDPCQSYILAEVICKNCNFC
HDLDLCKDPSILQDGAVLPKWCCTNCQTDYDSDSIEIELVEALKKKMMAYTLQDLVCSKC
KGIKEANMPVYCTCARDFDLTISIKGFTEQIQVFRNIARHYSMPFLLETVDWMFRMNTHL
RP
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcagaacagtgggaagctgagagcggacagacagccggtggccgacaccagt
tactctgaggatggctcctcccttcctgcactcaagcgcctggagcgcagtcagtggaca
gatgagatggatgcacgatttggatttgaccgtctcaaagatccaggcgagaagactggc
tggcttatcaacatgcacccaacagaactcctggatgaagataaacgaatgatcagtgct
gtggattattattttattgaagaagatgggagcagatttaaggttgctctaccttttgaa
ccctatttctatgttgccacaaaaaagggctgtgaaagagaggtttcatcattcttgtcc
aaaaaatttcaaggcaaaataagtaaaatatcaaccattccaaaagaggacttagatctg
cctaaccacttggttggcttgaagagactctatgttaagctcgcttttaatacggttgat
gacctgataaaagtccgaaaggagatttcctcggctgtaaagaaaaataaagaacgggag
aaatcaaatgatgcctatactgttatgttatccagtgccttggctgggggcaatgtgact
gaagaggaaggaacatcaaaaaaaatttctgatcaaatggaaaacataattgacatccga
gaatatgatgtcccttatcatgttcgagtatctattgatttgaagattcaggtggcgcat
tggtacaatatacgaattcgtggcggtgcctatcctcctgagattatacgtagggatgac
ttggttgagcgaccagatcctgttgttttggcatttgatattgagactacaaaattgcca
ttaaagtttccagatgctgagaatgaccagatcatgatgatttcctacatgatcgatgga
cagggctatttgattacaaacagggaaattgtgtctgaagatattgaggattttgagttt
acaccaaagccagaatatgagggccctttttgtgtttttaatgaaccagatgaggcaagc
ttaattcgtaggtggtttgaacaccttcaagaaacaaagcctaacatacttgtgacatat
aatggtgattcttttgattggccttttgtggaggcacgagctgctgtgcatggtttgaac
atgtacaaggagattggctttcagaaggatagtcagggcgagttcaaagctagtcagagc
attcacatggactgctacaggtgggtgaaacgagacagctacctccctgtaggtagccag
aacttgaaagctgcagctaaagccaaactgggatatgaccctgtggaattagatcctgaa
gatatgtgtcgaatggccactgaagaaccacagactttagccacatactcagtgtctgat
gctgtggctacctattacatgtacatgaagtatgtgcaccccttcatttttgccttgtgt
acaatcatccctatggaacctgatgaggtgctcagaaaaggttctggaacgctttgtgag
gcactcctcatggtgcaggcttttcatgccaatataatcttcccaaacaagcaggaacaa
gtctttaataaactaacaaacgatggtcatgtacttgattcagagacttacgtaggagga
catgtggaggctttggaatcgggagtttttcgtagtgacataccatgccgatttaaaatg
aacccagcagcatttgatttcttgctgcaaagagtggagcataccatgcgacatgccatt
gaggaagaggagaaacttcccatggaccaggttactaatttccaagaagtctgtgatgag
attaaaaagaaactgaactgtttgaaggaagttcctaacaggattgaatgtccactcatt
taccacttggatgttggggcaatgtacccgaacatcattctgaccaatcgcttgcagcct
tctgccattgtggatgaagctacctgtgcagcctgtgatttcaacaaaccaggtgcattc
tgccaacgcaagatgacctggacatggcgaggagagtttatgccagcctctcgcagtgaa
tatcatcgtattcaacagcagcttgagtctgagaagttcccacctactttcccaaatgga
caaccacaagctttccatgaattatcccgtgaagagcaagccaagtatgaaaagaaacga
ttggcagattattgccgcaaagcttacaaaaaaatccatattaccaaagtagaggaacga
gtaactacgatttgccaacgtgaaaattctttctatgtagatacagtacgagcttttcgt
gatcgacggtatgaatttaaaggttcacacaaggtttggaagaaaaaattgtctgctgcc
attgaatctggagatgctacagaaatcaagcgttgtaagaacatggaaattttgtatgag
tctctgcagctggctcacaagtgtattctaaactccttctatggctatgtcatgcgtaaa
ggggctcgttggtattccatggaaatggctgggattgtctgtcacactggagccaatatc
atcacacaggccagagaactgattgaacagattggacgacccttagagctggatactgat
ggtatttggtgtgtcattcctaactctttcccagagaactttgtcatcaagtcaaacaat
cctaaaaaacccaaggttacaatctcttaccctggtgcaatgcttaatatcctagtgaag
gaacgattcacgaatgagcagtaccaggagttggtggaccctgcatcattgacttatgtc
acccgcttagaaaacagcatattctttgaggttgatggtccttatctggctatgattctg
ccagcttccaaagaggaaggaaagaagctcaaaaaaagatatgcagtatttaatgaggat
ggctctctggctgaactaaaaggctttgaagtgaagcgacgtggggaattgcagctcatt
aaaatttttcagtcttctgtctttgaggcctttctgaaaggtaccacgctggaggaagtg
tatgcatctgttgctaaggtagcagattactggttggacgtattatacagcaaggcagct
aatatgcctgactccgagctatttgaattgatctctgagaatagatcaatgtcacgtaaa
ttagaggattatggagaacagaagtctacctcaataagtactgccaaaaggcttgctgaa
tttcttggggatcaaatggtgaaggatgcagggctgagttgccgttttgtcatctccaag
aaacccgagggtgccccagtcactgaaagagcaattccactggccattttccaggcggaa
ccaagtgttaaaaagtactatctgaagaagtggttgaagaatccctcattacaggacctg
gatattcgattaattctggactgggattattacattgagcgacttggcagtgccatccag
aagattatcactatcccagcagcccttcagcaggtaaagaatccagtcccacgagtccga
caccctgactggcttcacaagaaacttttggaaaagaatgatgtttacaaacaaaaaaaa
attagtgaactattcactaacactggagtcaggcaggtgacatgtaaccagcatctggtg
aaagaccaacaatcgcaaattagtgatttagaagattttggtgttcccaagcgcagagca
cagccagttatcccgatcagtacaaagcgaaggcgtggtatgaatgatgagagccaggaa
caatctcaagacctagaattaacccaatcttggagagagatactgggtcctccaccacca
ttgggaaagacaaaggatgaacggttagtgtggctgagataccagaagaggaagtgggag
cttcagtcaaagcaaagaaaggcacgtagaaagagaagaaagcttgatgatggtgcagat
gcgccaggtagacctattcgagatggtcccacaaccagtcttagcagctttttgcgtcga
actgcccgtaccatccttgacatgccatggcaaattgtacagattgcagaaacaagtcag
cctggcatcttcaaactgtgggctgttgttggacacgatttgcattgcattaaactcaac
gttcctcgagtattctatgtcaatcagcgcatccctaaagcagatgatagcgctgtttac
aagaaagtcaaccgcattcttcctcgttccaatattgtttacaacctatatgaatattct
gtaccagaagacatgtatcaggagcacatcaatgaaattaatgctgacctctctgctcca
gacattgagggagtctatgaaacacagattcccctgctctttcgtgccctcatccagctt
ggatgcatctgcatggtgaataggcaattatcacctcaccttggaggacgagaagtggac
acctttgagttggaacaactggaaatgcgttcattagcacaatttaattatctggaacca
ggtagcattcgacatatttacttctaccacaatgcccaagggagtaaggctttatttggc
ttgttcatcccctctcaaaggaaggcttctgtatttgttcttgacactgtgcgcagtaat
caaatgccgaatttgaataatctatatgcatctgaacgcactgctatgctggagaaatta
gatgaagaactgctgccacctgataagcacacatttgaagttcaggcagaaaaagaccca
aagttaatctacagagcgattcagcgtcttttgctgagctataaggatgagaaaagagga
ccaactctcattgcagtgcaatcaaagtggcagctaaagaggctgacaaatgggatgtca
gttttggatgagtttccattggtgcctgttcatgtaaatgatgatattagttatggtgta
ctggattggcagcgccatggtgtccgcagaatgatcagacactacctcaacttggatagt
attttgtccaaggcttttgagatggccaggtattatcatattcctattggaaatcttcca
gatgacatctcaacctttggatcagacctcttcttttccagacatcttagacgacataac
catctgttgtggctttctccaacatcacgacctgatctgggaggaaaggaagcagacgat
aatcgcctggttatggaatttgatgaaaagtcaacagttgagatcaataatccagggtgt
tactccacagtttctgtggagctggatattcagagcttggctgtgaataccatccttcag
tcccatcacattaatgatatggagggggcatccagtattggtatcagcttcgatgtaatc
cagcaagcttccctcgaagacatgatggctggtaatcaggcagctaatgcacttgccagc
tatgatgaggcagctttatgctccaacactttcagaattttgaaaagcatggttgttggc
tgggtgaaggagatcactcaatatcaaaatgtttatgctgataaccaagtgatgcacttt
tatcgttggctgcgatcaccttcttcactgctatatgatcctgcattacaccgtattctc
cataacatgatgaagaagctgtttcttcagctggtagcagaatttaaaaggttgggttca
tctgtcatctatgctaacttcaaccggctactgctatgtaccaagaagcgccgaattgag
gattctatgggatacgtggaatacatcacaaagagcattcattcccgtgagattttccac
tccctctccatctcgttttctcgctgctgggaatttctgctttggatggacccagctaat
tacgctggcatcaagggtaaactttcctccagtattctcattggagaggtggagagcaat
aaaggaacaaaggaaaatgttgaagatgacagcaatgatgatgaagagattcattctgaa
gatgaggaaactggcactgatgttgaagaccttttagacaataactggaatatcatgcat
tatctgccacaagcatcatcttgtcagagctacttcctcatgattgtctcagcttatatt
gtagctgtgtaccacagcatgaaggaagaactaagacgcagtgctccagggtgtactcct
ataaaacgccgaggcacaagccaaatctcacaagagcccgcaggcgacacaggagcttct
gcaggaatgattaccttctctcaggagtatgtgtctaatgagctcacacacaactttttc
accatcactcaaaaaattctgaagaaagtgagcagcaatagacactccactgagccctcc
gaaatgttcccagttctgccaggctcctatcttccattcaacaaccctgcactggaattc
atcaaatcagtctgtaagatcttatctctggattcgaatataaccaaccaggttaataag
ttgaaacgtgatcttttacgtctaattgatgtaggggaattctctgaggaagctcaattt
aaagacccctgccagtcctacatactagctgaggttatctgcaagaattgcaacttctgc
catgacctggacctttgcaaagatccttccatcttgcaggatggcgctgtactacccaag
tggtgctgcactaattgccagactgattatgactcagattctatagaaatagaattggta
gaagcactgaagaagaaaatgatggcctatacccttcaggatctggtttgttcaaaatgt
aaaggcatcaaagaagccaacatgcctgtttattgtacttgcgcccgggactttgatttg
accatttccataaagggatttacggaacaaatccaagtatttagaaatattgccagacac
tacagtatgccattcttgttggagactgttgattggatgtttaggatgaatacacaccta
aggccatga
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integrated database retrieval system
