Chiloscyllium plagiosum (whitespotted bambooshark): 122562767
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Entry
122562767 CDS
T08871
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122562767 (hnf1a)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122562767 (hnf1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122562767
NCBI-ProteinID:
XP_043571866
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All DBs
Position
25:complement(39624579..39831988)
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AA seq
657 aa
AA seq
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MVTKLTALQQELVNALVGSGLTRETLVEALQELEPYPAGQSEEAQGSALSILPSDASKPE
SLPALLNGHSNPDKLSGDESSEDGDDDYDTPAILKEPLNLSPEEAAQQKAIVEQFLQEDP
WRAAKMIKCYMQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVRKQRE
IAQQFSQPTQKAGQNVAESRQQLFLFAEYSNAAQGTPGEEPVEEPTSKKMRRNRFKWGPA
SQQILFQAYERQKNPSKEEREALVEECNRAECIQRGVSPSQAHGLGSNLVTEVRVYNWFA
NRRKEEAFRHKLAMDAYGTQQPHTVTPVTPHSNSPMQPSALSPSKLQGIRYGQQASNDVV
PTSVSHQGNSTMVTTHTVLQPVSPPGLEPSHSLLTTDTKLIAASGGTLPPVSTLTALHSL
PHNPHAVAQQTQNLIMASLPSVMAIAPSESTCLSPALTNGGASALVIGLATTQAQNVPVI
NSVGGSLTTLQPVQFPQQLHAHHQQPIMHQVQGHMAQSSFMATMAQLQNPHAVYSHKPEL
PQYHTSLFPQTMVFTDASNLSSLTSLPMAKQVLTLNSESQSENQINTSAQQVPLQNLEGS
IQHIHRISASPAITTVSSGSLVMYQNTQPADGHSHLLSPSQSSIETFISPQMSSTAP
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaattgacagccttgcagcaggagctggtcaatgcattggttggctctggg
ctcaccagagagaccctggtcgaagctcttcaggaactggagccttatccagctggccag
agcgaggaggctcagggctcagcgctcagcatcctccccagcgatgcctccaaacccgaa
tccctgccggccttactgaacggccacagcaaccccgacaaactctccggggacgagagc
tcagaggacggcgatgatgactacgacactccggccatcctgaaggaaccgctcaatctc
agccccgaggaagccgctcagcagaaggcgatcgtggaacagtttctccaggaggaccca
tggagggcagcaaagatgatcaagtgctacatgcaacagcacaatatcccccagcgagaa
gtggtggacacaactggcttaaaccagtctcacttatcgcaacatctgaataagggaacg
ccaatgaaaaaccagaagagggctgctctctacacctggtatgtccggaaacagagagag
atcgcccagcagttcagccaaccaacccaaaaggcaggccagaatgtggcagagagcagg
cagcagctgtttctctttgcagagtacagcaatgcagctcagggaactccgggggaagaa
cctgttgaagagccaaccagcaagaagatgcggaggaaccgattcaagtgggggcccgcc
tcgcagcagattttatttcaggcttatgagaggcagaagaacccaagcaaggaagaacgg
gaagcattggttgaagagtgcaacagagcagaatgtatacagcgaggcgtttccccatca
caagcccatggcctgggctctaaccttgtgaccgaggtgcgggtatacaactggtttgcg
aaccgtaggaaagaagaggcttttcgtcacaagttagcaatggatgcgtatggcactcag
caaccccacacagtaaccccagtgacaccccatagtaactcgcccatgcaaccaagtgcc
ttgtcgcccagtaaattgcaaggtataagatacgggcagcaagcttccaatgatgttgtg
ccgacatctgtgagtcatcagggtaacagcaccatggtgacaactcacactgtactgcag
cctgtttctcctccaggtctggagccaagccatagcttgttaacgactgataccaaactg
atagctgcatcaggaggaacccttcccccggtcagtacactgactgcgcttcacagttta
ccccacaacccacacgctgtagctcagcagacccagaacctcatcatggcttccttacca
agcgtcatggccattgcaccgagtgagtcaacctgcctgtcacccgcactcaccaatggg
ggagcttctgctttggtcatcggccttgctacgactcaagctcaaaacgttccggtcatc
aacagcgtgggagggagcctgacgacccttcagcccgtacagtttccacagcaactgcat
gcccaccaccagcagccaatcatgcatcaggtccagggtcacatggctcagagttcattc
atggctacaatggcccagcttcaaaacccacacgctgtatacagccacaagccagaactc
ccacagtaccacaccagtctcttcccccagactatggtcttcacggatgccagcaatctc
agcagcctcaccagtctccccatggcgaagcaggttcttacactaaattcggaaagccag
tcagaaaaccagatcaatacatcagcgcagcaagtccccttacagaatctggaaggttcc
attcaacatatccatcggatctctgcaagtccagccatcaccacagtttcctcaggtagt
ctggtcatgtatcaaaacacacagccagcggatggccacagccacctcctgtcaccgagt
caaagcagcattgagaccttcatctcgccgcagatgtcctccactgcaccgtaa
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