Chiloscyllium plagiosum (whitespotted bambooshark): 122564478
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Entry
122564478 CDS
T08871
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00052
Galactose metabolism
cpla00511
Other glycan degradation
cpla00531
Glycosaminoglycan degradation
cpla00600
Sphingolipid metabolism
cpla00604
Glycosphingolipid biosynthesis - ganglio series
cpla01100
Metabolic pathways
cpla04142
Lysosome
Module
cpla_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
122564478 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
122564478 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122564478 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
122564478 (glb1)
00511 Other glycan degradation
122564478 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122564478 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122564478 (glb1)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
122564478 (glb1)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122564478 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
122564478
NCBI-ProteinID:
XP_043575366
LinkDB
All DBs
Position
29:31585174..31668332
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AA seq
663 aa
AA seq
DB search
MQQAPGSMGPGVWLLLALSSSLISPSSSGTFQIDYDNDCFRKDGKTFRYISGSIHYSRVP
RYYWKDRLMKMYMAGLNAIQTYVPWNYHETESGKYDFTGDRDLESFLKLCNDIGLLVILR
AGPFICAEWDMGGLPAWLLQKKSVVLRSTDPDYLQFVHKWMDVLLPKIKPFLYQNNGPII
AVQVENEYGSYFACDYDYLRYLLNLFRYHLGDEVILFTTDGADKGFLKCGALQGLYATVD
FGPGGNATKSFEAQRYAEPHGPLVNSEFYTGWLDHWGKKHSVIKKEVVAKSLDEILALGA
NVNMYMFEGGTNFAYWNGANSPYWPEPTSYDYDAPLSEAGDPTDKYFSVRQVIGKYKTLP
AGPVLPATPKYAYGLIQVKKLQSVVELVNLLSFSGPVKSVYPLTFVEMKQYFGYMLYRNT
LPINCTEGTPLASPENGIHDRAYVMVDGVFQGILERNKINTINITGQAGSRLDILLENMG
RINYGEGIHDFKGLVTNLTLASNILTNWTIYSLNIDEVVASGYLNKFQRMTPEAPAEVNA
SVPAFYLGTFVIPNGIPDLPQDTYLKFPGWTKGQVWINGFNLGRYWPARGPQITLYVPAH
ILSTSAVNNVTLLELENAPCGAEHNTVCAVQFVDTPVLNGTTAYTNFLQKLSINSLGMRD
LNG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagcaccaggaagcatgggaccgggtgtgtggctgttgctggctcttagttcc
agtctaatttcgccaagttcatctggaacattccaaattgattatgacaatgactgtttc
cgaaaagatggcaaaacttttcgctacatttcggggagcatacactactctcgtgtacct
cgttactactggaaggaccgccttatgaaaatgtatatggcgggattgaatgcaattcaa
acatatgtgccgtggaattaccatgagaccgaatctggcaaatatgacttcactggagat
agagatttggaatccttcttaaaattgtgcaatgatatcggtttgctggtcatcttacga
gctgggccctttatttgtgcagagtgggacatgggtggtcttcctgcctggctgctacag
aagaagtcagtcgtccttcggtctacagatccagattatctccagtttgttcataaatgg
atggatgttttacttcccaagatcaaaccatttttgtatcagaacaatggaccaatcatt
gcagtacaggtggagaatgaatatggtagctactttgcttgtgactatgattacctacga
tacctactgaatctctttcggtatcatctgggagatgaagttattttgtttacaacggat
ggcgcagacaaaggattcctgaagtgtggtgcactgcaagggctatatgctacagtggat
tttggtccaggtggaaatgctacaaaatcatttgaagctcaaagatatgcagagcctcat
ggaccactggtaaactctgagttttacacaggatggttggatcactggggcaagaaacac
tctgtgatcaaaaaagaagtcgttgctaaatcattggatgaaatccttgctcttggagcc
aatgtcaatatgtacatgtttgaaggaggaacaaactttgcctactggaatggagcaaac
tctccctattggccagagccaacgagttatgactatgacgcccccctgtcagaagcagga
gacccgactgacaaatacttcagtgttcggcaagttattggaaagtacaaaacgttacct
gccggtcctgtacttcctgcgacccccaaatatgcatacgggttaatacaagttaaaaag
ttgcagagtgtcgtagaattggttaacttgctgtcgttctctggcccagtcaagtctgtt
tacccactgacgtttgtggaaatgaagcagtattttggatatatgctgtatcggaatacc
ctgccaataaattgcactgagggtaccccactggcatcgcctgagaatggtatccatgac
agagcctatgtcatggtggatggggttttccaagggattctggagagaaataaaatcaac
acaatcaacatcactggacaggctggttcaagacttgacatattattagaaaacatggga
agaataaattatggggaaggcatccatgatttcaagggactggtaacaaatctaactttg
gcttcaaacatcctgaccaactggaccatctattcattaaatattgacgaagtggtggca
agtggctacttaaacaaattccagaggatgactccagaagccccagctgaggttaatgcg
agtgtgccagccttttatttaggtacctttgtgattccaaatggtattccagatctacct
caagatacataccttaaatttcctggatggactaagggtcaagtgtggatcaacggcttt
aacctaggtcgttactggccagccaggggaccccaaatcactctgtatgttcctgctcat
attctcagcacctccgcagttaacaacgtcacattgctggagctggagaatgcaccgtgt
ggagctgagcataacacagtctgtgctgtgcaatttgtggacactcctgttttaaatgga
accacagcttacaccaactttctccagaagctttcaataaacagtcttggcatgcgtgac
ctgaatggttaa
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