Cavia porcellus (domestic guinea pig): 100135619
Help
Entry
100135619 CDS
T07777
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04721
Synaptic vesicle cycle
cpoc04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100135619 (Slc6a4)
04721 Synaptic vesicle cycle
100135619 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpoc02000
]
100135619 (Slc6a4)
Transporters [BR:
cpoc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100135619 (Slc6a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100135619
NCBI-ProteinID:
NP_001166489
Ensembl:
ENSCPOG00000010596
UniProt:
O35899
LinkDB
All DBs
AA seq
630 aa
AA seq
DB search
METTALNSQKAPSVCKDREDCQENSILQKSGPTSAGGVESGQIFNGYSSVPSTGMGDDAE
HSVPTATTTLVAEVHHGERETWGKKVDFLLSVIGYAVDLGNIWRFPYVCYQNGGGAFLLP
YIIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYTICIIAFYIASYYNTII
AWALYYLISSFTDRLPWTSCRNSWNTANCTNYFSEDNITWTLHSTSPAEEFYIRHILQIH
RSKGLQDVGGVSWQLTLCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGA
TLPGAWKGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSAVNCMTSFVSGFVIFTVLGYMAEMRSEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKHREWFVLAVVITCFFGSLTT
LTFGGAYVVKLLEEYATGPAVLTVVFIEAIAVSWFYGVTQFCSDVKEMLGFSPGWFWRIC
WVAVSPVFLLFIICSFLMSPPQLRLFQYSYPHWSVILGYCIGTSSVICIPTYITYRLVTT
PGTLKERIIKSITPETPTEIPCGDICLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacagccttgaattctcagaaggcgccgtcggtgtgtaaggacagagaggat
tgtcaggaaaacagcattttacagaagagtggtcctacatcggcgggtggagtggagtct
ggccagatattcaatgggtactcatcggttcccagcactggcatgggggatgacgctgag
cactctgtcccgactgccaccaccaccctggtggctgaggtgcaccatggggagcgggag
acctggggcaagaaggtagacttcctcctctcggtcatcggctacgctgtggacctgggc
aacatctggcgctttccctatgtgtgttaccagaacggtggaggagcattcctcctcccc
tacatcatcatggccatctttggagggatcccactgttttacatggagcttgcgttgggc
cagtatcaccggaatggatgcatttctatatggaggaaaatctgcccgatttttaaaggg
attggctacaccatctgcatcatcgccttctacattgcctcctactacaacaccatcata
gcctgggccctctactacctcatctcttcctttacggaccggctgccctggaccagttgc
aggaactcctggaacacggccaactgcaccaactacttctctgaggacaacatcacctgg
acgctccactccacctcccctgcggaagagttttatatacgccacatccttcagatccat
cggtctaagggactgcaggacgtgggaggcgtcagttggcagcttactctctgcatcatg
cttatctttaccatcatatacttcagcatctggaaaggtgttaaaacatctggcaaggtg
gtgtgggtgacagctacctttccttatatcgtcctttctgtgctgctggtgaggggggcc
acactcccaggagcgtggaagggtgttctcttctacttgaaacccaactggcagaagctc
ctggagacaggggtgtggattgatgctgctgctcagatattcttctctcttggtccaggc
tttggggtcctcctggcctttgccagctataacaagttcaacaacaactgttaccaagat
gccctggtgaccagtgcggtgaattgcatgacgagcttcgtttcggggtttgtgatcttc
acggtactggggtacatggctgagatgaggagcgaagatgtatctgaagtagccaaagat
gcaggccccagcctcctcttcatcacctatgcagaggccatagccaacatgccggcatcc
acgttttttgccatcatcttcttcctcatgttaatcacactgggtctggacagcacgttt
gcaggcttggagggagtgatcactgcagtgctggatgagtttccacacatctgggccaag
caccgggagtggtttgtgcttgctgtggtcattacttgcttctttggatccctgaccacc
ctgacttttggaggggcctacgtggtgaagttgctggaggagtacgccacggggcctgcg
gtgctcaccgtggtgttcatagaagcaatcgctgtgtcttggttctatggggtcactcag
ttctgcagcgatgtgaaggagatgctcggcttcagcccgggatggttttggaggatctgc
tgggtggcggtcagccctgtgttcctcctgttcatcatctgcagttttctgatgagccca
ccccagctacgacttttccaatacagttatccccactggagtgtcatcctgggttactgc
atagggacttcctccgtcatctgcatccccacatacattacctaccggctggtcaccacc
ccagggaccctgaaggagcgcattattaaaagtatcactccagaaacaccaacagaaatt
ccttgtggggatatctgcttgaatgctgtgtaa
DBGET
integrated database retrieval system
