Cavia porcellus (domestic guinea pig): 100716540 Help Entry 100716540         CDS       T07777                                  Symbol Polq Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism cpoc  Cavia porcellus (domestic guinea pig) Brite KEGG Orthology (KO) [BR:cpoc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cpoc03400]     100716540 (Polq) Enzymes [BR:cpoc01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      100716540 (Polq) DNA repair and recombination proteins [BR:cpoc03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     100716540 (Polq) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 Helicase_dom4_arc UPAR_LY6_2 HHH_5 HAGH_C Motif Other DBs NCBI-GeneID:  100716540 NCBI-ProteinID:  XP_023420662 LinkDB All DBs Position Unknown AA seq 2567 aa AA seqDB search MNVPRRGGNRRHSASDSDWFPGSGSDSGVSPRRPWGPVLSPPPGLGRSLKAAGLCKQTVP DDQIDKLLLANWGLPKAVQQKYHSFGVKQMFEWQAECLLLGQVLEGKNLVYSAPTSAGKT LVAELLILKRVLETQKKALFILPFVSVAKEKKYYLQNLFQEVGIKVDGYMGSTSPTGHFS SLDIAVCTIERANGLINRLIEEDKMDLLGMVVVDELHMLGDCHRGYLLELLLTKICYLTQ KSASRQADLASPLSNAVQVVGMSATLPNLELVASWLNAELYHTDFRPVPLLESIKIGNSI YDSSMKLIREFQPMLQVKEDEDHVVSLCYETVCDNHSVLLFCPSKKWCEKLADIIAREFY RLHHSAEGLGKQSEFTPPILEPKSLLEVVDQLKRSPSGLDSVLQKTVPWGVAFHHAGLTF EERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFSGHPLNILTYKQMVGRAG RKGVDTMGESILICKNSEKSKGIALLQGSLKPVCSCLQRQDGEITASMIRAILEIIVGGV ASTSQDIQIYASCTFLAASMTKEKQRIQKNQDSVQLGAIEACVMWLLENEFIQIIEDRNG TEGNVYHPTHLGTATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMFEDWTT IDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSL VLLDLISEIPLKEIIQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQK RLTFGIQRELCDLVRVSLLNAQRARVLYASGFLTVADLARANVAEVEVVLKRAVPFKSAR KAVDEEEEAVEERQNMGTIWVSNRKLTPREAAVLIVDEAKMILQQDLVEIGVKWDPSSPL NAGTYSLTRSESKDKEHTFVLQTTGCHKQLMPKNKSNMRFNDTSINNSPNTVESSGHTSS FHCKRQNSNQEHRSDSILRGRKQGSLGIKKEKSRTFLNERKTSTGKVLQTSLEKTKKAAL NFNSDQKNTSFLCWKHKKSQKESQDSSPVKDSVMKGSVTSPVHENRFTFDEENVEFRSPE PFVKDVSCAEGKNNKTSFLLQTEQYCLRNRTITNDSFMEHFFTGSPRQNMICQATSIVSK NGNGLPVPEIEKINEVKIQIDSKNQAFSVKHCDPHPANQWLEKQQCDKRSDICATQKKMT EEEMPGEVVSSCLHRNANVATIKCESVKSNSEENKSNHFQALGSNIRTEVPSGILQSAEI FGKSGGQHENFVNSSRMQEKTAASRNENNHAINLGLVPCDFEDSLYLDTQSEKIIQQMAT ENAKQGAKDTSLTARNTQKSDKQNSLASFHKEFPVTSSEPHPLEVTSPAHSDLKTLVTEK QTTKHGADSPGSPVFSSPVLIGENGPCFKGYEISVTDSQLNSFLQGYQTPVTVKSVLPVV PPKRTPTGMEGDCLLAFETSLNMSDSLLFDSFSEDFLVKEQPPGQAKKLLPSEITSNHLS DSLCLQQEDPTKTSNIEEHQNIQQQQLTCFNNESVMFSEMDSTQLREAMDNADIVSVQEK HNTEVSFRTLELGGLVIKDNGRLQGEVIGDQDEMAQKSKLTETKKNNSFMWSGRSFDLSP GLQQILDKVSSPLENEKLQLTTVNLPSLKGKSIELNDRREMISNSETCHLHGMSFSCNNE IKCKMDALENKASHGETPSLLPCKENCVLDANGLIPPTPIPSSASKLVFQEILGTSVKPC TRNILHLGEGCSFGSPSGVKTHGLSPESRNGFQDDSPAGDTRFSLQLLEDGLQLTPVSCS SAGLAIIDVASNQTLFQTFVKEWQYKKRFSISLACEKIKSLTSSKTVTIGGRFKQAHLPQ ETLVSDDRFPVQGSDDILVVGLAICWGGRDAYYISLQKEQKHSEISASLAPPSLDPALTV RERMWHLRSCLQKESDKDRSVIMYDFIQSYKILLQSCGISLEQNYEDPKVACWLLDPDST EPTLHSMVTSYLPQELPLLEGLETGPGIQSLGLHVSTEHSGRYRASVESILVFNCMNQLN SLLQKENLQDIFYKVEMPSQYCLALLELNGIGFSAVECESQKHVMQAKLDAIEMQAYQLA GHSFSFTSADDIAEVLFLELKLPPDGEMKIQSSKKTLGSTRRGSERAQKQRLGRRFSTSK DVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLRMERIYPVSQSHTATGR ITFTEPNIQNVPRDFEIKMPTLVEESPPSQSIGRDLLPMGRRQNKRRCVRNPGHQAQMKK ASDRGMPFSVSMRHAFVPFSGGLILAADYSQLELRILAHLSRDHRLIQVLNTGADVFRSI AAEWKMTEPESVGDELRQQAKQICYGIIYGMGAKSLGEQMGIKEDAAACYIDSFKSRYKG INCFLRETVKNCERDGFVQTVLGRRRYLPGIRDNNPYRKAHAERQAINTTVQGSAADIVK IATVNIQRQLETCSAFKSHSHRERMLQSDGTGLLPKGELQGTSCPIRGGFFILQLHDELL YEVAEEDIVQVAQIVKNEMESAIKLSVNLKVKVKIGSSWGELKDFDV NT seq 7704 nt NT seq  +upstreamnt  +downstreamnt atgaatgttccgcgccgcggtgggaatcggcggcattcagcgtcggactcggactggttc ccgggaagcggcagtgacagcggtgtcagcccgaggcgcccctgggggccggtgctgagt ccgcccccgggcctgggccgcagcctgaaggccgcaggactctgcaagcaaacagttcct gatgaccaaatagacaagctgttattggcaaattggggacttcctaaagcagttcagcag aaatatcacagttttggtgtaaaacagatgttcgaatggcaggcagaatgccttctgctt ggacaggtcttggaaggaaagaatttagtttattcagctcctacaagtgctgggaagacc cttgtagcagaattactcattttaaagcgtgttttggaaacgcagaagaaagccttgttt attcttccctttgtttctgtggctaaagagaagaaatactatctccagaatctgtttcaa gaagtaggaataaaagtagacggttatatgggcagtacctctccaacaggtcatttctct tcgttggatattgctgtctgcacaattgagagagccaatggtctgatcaatcgccttata gaggaagataagatggatctgttaggaatggtagttgtggatgagttgcatatgttggga gactgtcaccgaggatatctgctggaacttttgctcactaaaatttgctatcttactcag aaatcagcatctcgccaggcggatttagccagtcctctgtccaatgctgtgcaagttgtt ggcatgagtgccactcttcctaatttggagcttgtggcttcctggttgaatgctgaactc taccatactgactttcgtcctgtaccacttttggagtcaataaaaattggaaattccatt tatgactcttcaatgaagcttataagggaatttcaacccatgctacaagtgaaggaagat gaggatcatgttgttagtttatgttatgagactgtttgtgataaccattcagtattactt ttttgtccatcaaaaaaatggtgtgagaagctggcggatattattgcgcgggagttttat cgtctacatcattcagccgagggactgggaaaacaatctgaatttacaccaccaattctg gaacccaaaagcctcttggaagtagttgatcaattgaaacgttctccttcgggactggat tctgtgttacaaaaaactgtaccatggggagtagcatttcatcatgcaggtcttaccttt gaggagcgggatatcattgaaggagctttccgtcagggtctcattcgggtcttggcagca acttctactctctcttctggggtgaatttgcctgctcgtcgtgtgattattcggactcct gttttcagtggtcaccctctcaacattcttacttacaagcagatggttggtcgtgctggc aggaaaggagtggacacaatgggtgagagtatcttaatttgtaagaactctgagaaatca aaaggcatagccctacttcaaggatccttaaaacctgtttgcagttgtctacaaagacaa gacggagaaataactgccagtatgatccgagctattctggaaatcatagttggtggagtg gcaagtacatcacaagacatacagatttatgcttcttgcacgtttttggctgcaagtatg acaaaagagaagcagagaattcagaaaaatcaagattctgttcaacttggagcaattgaa gcttgtgtgatgtggctactggaaaatgaatttattcagattatagaagacagaaatggg acagaaggaaatgtgtatcatccaacacatctgggtacagctactctttcttcttcactt tctccaactgataccttagatatttttgctgaccttcaaagagcaatgaagggctttgtt ttagagaatgaccttcatattgtctatctggttacacctatgtttgaagattggacgact attgattggtatcgatttttttgtttgtgggagaagttgccaacttctatgaaaagggta gcagagctggtgggagttgaagaagggttcttggctcgctgcgtgaaaggaaaagtagta gccagaactgagagacaacaccgacaaatggccatccacaaaaggtttttcaccagtctt gtgctattagatttaatcagtgaaattcccttgaaggaaattattcagaaatacggttgt aatcgtggacagatccagtctttgcaacagtcagctgctgtttatgcagggatgattaca gtgttttccaaccgtcttggctggcacaacatggaactgttgctttcccagtttcagaag cgtcttacctttggcatccagcgggagctgtgtgacctggtccgggtgtccctacttaat gcgcagagagccagggtcctctatgcttctggcttccttactgtggcagatcttgctcgg gcaaatgttgctgaggtggaggtggttctgaaaagagctgtgcccttcaaaagtgccaga aaggcagtggatgaggaagaggaagcagttgaagaacgtcagaatatgggaacaatttgg gtgtccaacagaaaactaactccgagagaagcggcagtcttaatagtggatgaagccaaa atgattctgcagcaggacttagttgaaataggggtgaagtgggatccctcttccccgtta aatgctggtacatattccctgaccaggagtgagtcaaaagacaaggaacacacatttgta ctccagactacaggttgtcacaaacaattaatgccaaagaacaaaagtaatatgagattt aatgacacttctatcaacaattcaccaaatacagtggaaagcagcgggcacacaagttcc tttcattgtaagcgccagaatagtaatcaggagcataggagtgattccatcttgagagga agaaaacagggttctttgggcataaaaaaagagaagtccagaacttttctgaatgagaga aaaacaagtactgggaaagtccttcagacctcattagagaaaacaaaaaaagcggctttg aatttcaattcagaccagaagaacacaagttttctatgttggaaacataagaagagccaa aaagaatcccaggacagtagtcctgtgaaagactctgtgatgaaaggctctgtaactagt cctgttcatgaaaatcgatttacgtttgatgaggagaatgtggaatttagaagtccagag ccatttgtcaaagacgtatcttgtgctgagggaaaaaacaacaaaacatcattcctatta caaacagagcaatattgtttaaggaacagaacaataactaatgattcttttatggagcat tttttcacaggatccccaagacaaaatatgatttgtcaagccactagtattgttagtaaa aatggaaatggattgcctgtccctgagatagaaaaaataaatgaagtgaaaatacaaatt gattccaaaaaccaggctttttctgtgaaacactgtgatcctcatccagcgaaccagtgg ctggaaaaacaacagtgtgataaacggtcagacatttgtgctacacagaaaaaaatgaca gaggaagaaatgcccggtgaggtagtcagtagctgtttgcatagaaatgcaaatgttgct actatcaaatgtgaaagtgtaaagtctaatagtgaagaaaataaatccaatcattttcaa gcattgggaagtaatataagaaccgaggtgcctagtggaatacttcagtcagcggaaata tttgggaaatcaggaggccagcatgaaaattttgtaaattcttctagaatgcaagaaaaa acagcagcaagcagaaatgaaaataaccatgctatcaatttaggtttagtgccgtgtgat tttgaagatagtttatacctagatactcagtcagagaaaataattcaacagatggcaact gaaaatgccaaacaaggagcaaaggacaccagcctgaccgcaagaaatacacagaagtca gataagcagaactcactggcctcttttcataaagagtttcctgtcacttccagtgagcca catcccctagaagtgactagtccagctcattcagaccttaagactctggtcactgagaag caaaccaccaaacatggggccgatagtcccgggagcccagtttttagttctccagtacta ataggggaaaatggcccttgttttaaaggatatgaaatttctgttactgactctcaatta aatagttttcttcaaggttatcaaacacctgtgactgtgaagtcagtcttacctgtggta cctccaaagagaactcccactggtatggaaggagactgcctgttagcttttgaaacaagt ttgaatatgagtgatagtttactctttgacagtttcagtgaagacttcctagtaaaagaa cagccacctggacaagcaaaaaaactccttccttctgaaataacttcaaaccatctcagt gattctctttgtctacagcaagaggatcctactaaaacatcaaatatcgaagagcatcaa aatattcagcagcagcagttaacttgtttcaataatgaatctgttatgttttcagaaatg gattctactcagttgcgtgaagctatggacaatgccgatatagtttctgtccaagagaaa cataatactgaagtatcttttagaacattagaactaggtggtttagtgattaaagacaat ggtcgccttcaaggagaagtaattggtgatcaagatgaaatggctcaaaagtccaaatta actgagacaaagaaaaataattcattcatgtggtcggggagatcctttgatttaagtcca ggattgcaacagattttagataaagtgtccagtccactagaaaatgaaaaactacaatta acgactgtaaacttacctagtttgaaaggaaaaagtattgagttaaatgacagacgggaa atgatttcaaattcagagacatgtcatctacatggcatgtcattctcctgtaataatgaa ataaaatgcaagatggatgcactagagaacaaggccagtcatggtgaaaccccatcactc ttgccttgtaaagaaaactgtgtgttagatgctaatggtctcattcctcctacacctatt ccatcatctgcttctaagctggtatttcaagagattcttggaacttctgtaaaaccttgc actagaaatattttacaccttggtgaaggttgttcatttggctcaccttcaggtgtgaaa acccatggcttaagtccagagagcaggaatggtttccaagatgacagtcctgctggagac accaggttttcactccagttgttggaggatggcttgcagttaactccagtctcatgcagt tcagcaggtttggcgatcattgatgtagcaagtaaccagactctctttcagacatttgtt aaagagtggcagtacaaaaaacggttttccatctcactggcctgtgaaaagataaaaagt ttgacctcctctaaaactgttactattggtggaagatttaaacaagctcacttacctcag gaaaccctggttagcgatgatagatttcctgttcaaggctcggatgacatactagtggtt ggactggcaatatgctggggtggaagagatgcatattatatttcactgcagaaggagcag aagcattctgaaattagtgccagtttggccccaccttctctggatccagccctgactgtg agagaaaggatgtggcaccttcgatcctgcttgcaaaaggaatctgataaggaccgttcc gttatcatgtatgatttcatccagagctataaaattcttcttcagtcttgtggcatctcc ctggagcaaaattatgaagaccctaaggtagcatgctggttattagatccagattccaca gagccaacacttcacagtatggtcacgagctaccttcctcaagagctccccctcctagag ggcctggagactggacctggaattcaaagcctggggctgcatgtgagcactgagcattct gggcgatatagagcatctgtagagtccattcttgtcttcaactgtatgaaccaactcaac tctttgctgcagaaggaaaatcttcaagatattttctacaaggtggaaatgccttctcag tattgcttggccttgctagaattaaatggaattggcttcagtgctgtggagtgtgaaagc cagaagcacgtcatgcaagccaagctggatgcaattgagatgcaggcctatcaactagcc ggccatagtttttccttcaccagtgcagatgacattgcagaggttctgtttttagaactg aagttgccaccagatggagagatgaaaatccaaagcagcaagaaaaccttgggttctacc agaagaggcagtgagcgggcacagaagcagaggctcgggagacgatttagcaccagcaag gatgttttgaataaattaaaggcattgcatcctttaccaggcttgatcctggaatggaga agaatcaccaatgctattaccaaagtagtctttccactgcaacgggaaaagcgtctgaat ccttttcttaggatggaaagaatctatcctgtgtcacagtctcacacggctacaggacga ataacctttacagaaccaaatatccagaatgtgccaagagattttgaaatcaaaatgcca accctcgtagaagagagtcccccttctcagtccataggcagagacctactgcccatgggc agaagacaaaataagaggcgttgtgtccggaacccggggcaccaggcgcagatgaagaaa gcttcagatagagggatgccattttcagtgagcatgcgacatgcttttgtacctttctca ggtggtttaatactggctgctgattactctcagctcgaactgaggatcttggctcatttg tctcgtgatcatcgtctcattcaagtactaaacactggagccgacgttttcaggagcatc gcagcagagtggaagatgacggagccggagtctgtgggggatgagctgaggcaacaggca aagcagatttgctatggaatcatttatgggatgggagctaaatctttaggagaacaaatg ggcattaaagaagatgctgctgcttgctatattgattccttcaagtccagatataaaggg attaattgtttcctgagagagacagtgaagaactgtgaaagagatggctttgttcagacc gttttgggaaggcgtagatacctaccaggaatcagagacaataacccttatcgtaaagct catgctgaacgtcaggccatcaacacaacagtccaaggatctgcagctgatatagtcaaa atagccacagttaacattcagaggcaactggagacctgctcagccttcaaatcccacagc catagggagaggatgcttcagagcgatgggacaggattattaccaaagggagaactacag gggacgtcctgcccgatccgaggaggcttcttcatccttcagctccatgatgagcttcta tatgaagtagcagaagaggacatcgttcaggtagctcagattgtcaagaatgaaatggaa agtgccataaaactttctgtgaatctgaaagtgaaagtgaaaatcggctccagctggggg gagctgaaggactttgatgtttag

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