Cavia porcellus (domestic guinea pig): 100721293
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Entry
100721293 CDS
T07777
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X2
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc00310
Lysine degradation
cpoc01100
Metabolic pathways
cpoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100721293 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100721293 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100721293 (Setdb1)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100721293 (Setdb1)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100721293 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100721293 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
DUF4537
Motif
Other DBs
NCBI-GeneID:
100721293
NCBI-ProteinID:
XP_003478985
Ensembl:
ENSCPOG00000001632
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MSSLPGCIGLNAATATGESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVKQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSNLGLQYRDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKTNCQDL
HKGTFSHMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPVDNLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLQKTWEDIEDTSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQYKPVEPPQPTAPPAPPAPPVSPQAGENDLESQLAQ
SRKQVAKKSTSFRPGSVGSGHSSPTSPALNENISGGKPGINQTFRSPLSSTTSTPAPAAP
PVPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNPLLV
PLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDP
YVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTG
PEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECN
KRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESDVPCSSDSSGVDLKDQEDGNSGTEDAEESN
DDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEVASKDSRPPDLGPPHIPLPPA
IPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRAAGGRGEAE
KTSASGLGIKDEGDSKQAKKEDPDDGNKMSVITESSRNYGYNPSPVKPEGLRRPPSKTSM
HQSRRLLASAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEG
DDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFYD
GEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELT
WDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccctccccgggtgcattggtttgaatgcagcaacagctacaggggaatctgaa
gagattgcagagctgcaacaggcagtggttgaagagctaggtatttctatggaggaactt
cgacagttcattgatgaagagctggaaaagatggattgcgtaaaacaacgcaagaagcaa
ttagcagagttggagacatgggtgatacagaaagaatctgaagtggctcatgttgaccag
ctctttgatgatgcatccagggcagtgactaattgtgaatctttggtgaaggacttctat
tccaacctgggattacagtaccgggacagtagctctgaggatgaagcatctcagcctaca
gaaataattgagattcctgatgaagatgatgatgtgctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagctatggctgccttaagaaaatca
gctcaagatgtccagaagttcatggatgctgtgaataagaagaccaattgtcaggatctt
cataaaggaaccttcagtcacatgtctggagaactgagcaaagatggtgacctgatagtc
agcatgcggattctgggcaagaagagaacgaagacatggcacaaaggcacccttatcgcc
atccagacagtggggtcaggaaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtctgggaaccatattgcctatgattaccaccctcctgttgacaacctgtatgtg
ggcagtcgagtggtagccaaatacaaagatgggaatcaggtctggctttatgctggcatt
gtagctgagactccaaacgtcaaaaacaagctcagatttctcattttctttgatgatggc
tatgcttcctacgtcacacagtcagaattatatcccatttgccggccattgcaaaagact
tgggaggacatagaggacacctcctgccgagactttatagaggagtacatcactgcctat
cccaaccgccctatggtgcttctaaagagtggccagcttatcaagaccgagtgggaaggc
acctggtggaagtcccgagttgaggaggtggatggcagccttgtcagaatccttttcctg
gatgataaaagatgtgaatggatctatcgaggctctacacggctagagcccatgtttagc
atgaagacatcctcagcctctacactggagaagaagcaagggggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgttgtccagtatacccaggatctaaca
agcactggaacccaatataagccagtggagcccccacaacctacagctccacctgctcca
cctgccccacctgtgtccccccaagcaggtgaaaatgatttagaaagccagcttgctcag
tcacggaagcaggtagccaaaaagagcacatccttcagaccaggatctgtgggctctggt
cattcttcccctacatcccctgcactcaatgaaaatatctctggtgggaaacctgggatc
aaccagacattcagatcacctttaagctcaacaacctctacccccgcaccagctgcgccc
ccagttcctccagccccgccagcctttcatggcatgctggaacgggccccagcagagccc
tcctaccgcgcccccatggaaaagcttttctacttacctcatgtctgcagctatacttgt
ctgtctcgggtcagacctatgaggaatgagcagtaccgaggcaaaaaccctctgttggtt
ccactactgtatgacttccgacggatgactgcccggcgccgagttaaccgcaaaatgggc
tttcacgttatctataagacaccttgtggcctctgccttcggacaatgcaagagattgaa
cgctacctttttgagactggatgtgacttcctcttcctagagatgttctgtctggatcca
tacgttctagtggaccgaaaatttcagccctataagcctttttactatattttggacatc
acctatgggaaggaagatgttcccctgtcctgtgtcaatgagattgacacaacccctcca
ccccaggtggcctatagcaaggaacggattccaggcaagggtgtgttcattaatacaggt
ccggaatttctggttggctgtgactgcaaggatgggtgtcgggacaaatccaagtgtgcc
tgccaccagttaactatccaagctacagcctgcactccaggaggccaaatcaaccctaat
tctggctaccagtacaagagacttgaagagtgtttacctacaggggtatatgaatgtaac
aaacggtgcaaatgtgacccaaacatgtgcacaaaccggttggtgcagcatgggctacag
gtccggctacagctatttaagacccagaacaaaggctggggtatccgctgcttggacgac
attgcgaaaggctcttttgtgtgtatttatgcaggtaaaatcctgaccgatgactttgca
gacaaggagggcctggaaatgggtgatgagtactttgcaaatttggaccatattgaaagc
gtggagaacttcaaggaaggatatgagagtgacgttccctgttcctctgacagcagtggt
gtggacttgaaagaccaggaagatggcaatagtggtacagaggatgctgaagagtccaat
gatgatagctcagatgataatttctgtaaggatgaagatttcagcaccagctcagtgtgg
cgcagctatgccactcggagacagacccggggccaaaaggagaatggactgtcggaggtg
gcttccaaagattctcgccccccagaccttgggccaccacacattcctcttcctcccgca
atccctgtagggggctgcaatccaccttcctctgaagagacacccaagaacaaggtggcc
tcctggttgagctgcaatagtgtcagcgaaggtggttttgctgactctgacagccgctca
tcctttaagacaagtgagggtggtgagggccgggctgcgggaggccgaggggaggctgag
aagacctctgcctcaggattgggaatcaaggatgagggcgacagcaagcaggctaaaaaa
gaggaccctgatgacggaaacaagatgtcagttatcactgaaagctctcgaaattatggt
tacaatccttctccagtgaagcctgaaggacttcgacgcccacctagtaagacgagcatg
catcagagccggcgactccttgcctctgcacagtccaaccctgatgatgtcctgacactg
tccagcagcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggtcag
acttcagccacagcagttgacagtgatgatatccaaaccatttcctctggctctgaaggg
gatgactttgaggacaagaagaacatgtctggtccaacgaagcgtcaagtagcagtgaaa
tcaacccgaggctttgctcttaaatcgacccatggcattgccattaaatcgaccaacatg
gcctccgtggacaagggggaaagcgcacctgtccgtaaaaacacacgtcagttttatgat
ggtgaagagtcctgttacatcattgatgccaagcttgaaggcaacctgggccgctatctc
aatcatagctgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctt
cgcttcccctgggtagccttctttgccagcaagagaatccgggctgggacagaacttact
tgggactataactacgaggtgggcagtgtggaaggcaaggagttgctgtgctgctgtggg
gccatcgaatgcagaggtcgtcttctctag
DBGET
integrated database retrieval system
