Cavia porcellus (domestic guinea pig): 100734219
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Entry
100734219 CDS
T07777
Symbol
Scn11a
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100734219 (Scn11a)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100734219 (Scn11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
100734219
NCBI-ProteinID:
XP_023418374
Ensembl:
ENSCPOG00000030301
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MDSVPRLKMDDRFYSVIFPDERNFHPFTSDSLAAIEKQIAIQKEKKKSKDKTVFEPLSRP
QLDLKASRKLPKLYGNIPPDMVAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFVF
GPFNPIRSLAIRILVHSLFSMFIICTVVVNCLFMAMTSAKDNNSTKTDFPEYTFTAIYIL
EALIKICARGFILDEFSFLRDPWNWLDSIVIGTAIADLVPGSQIKLLSLRTFRVFRALKA
ISVVSGLKVIVGALLRSVKKLVDVMVLTLFCLCIFALVGQQLFQGVLSQKCVKEGCNRTH
ETNESCFVTEDNSLRPKMCGTWQVDRCPSNSECLPTGVNPDNNYTNFDNFGWSFLAMFRL
MTQDSWEKLYQQTLRTAGPFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETE
AKEKMFQEAQKLIQEEKEALVAMGIDRSSLTSLQASSFSPKKKKFFGTTKRKSFFLRGSK
KDKAPGSDSEEESSKNPPLLEQTKRLSQNLPVDIFDDHGDPFQRQRALSAVSIITITMQE
NYVSPKWLRIKKALRIVMTDPFTELAVTICHFQEWFTLSLVPMEDIFLDGGTAALSHQPF
NYQEADFALLSTEWKVMLLFRSAVVTSESLVHSSTGLGTVERTRTGKAECAVVTTVFLAQ
GLEIVFTGIFIAEMCLKIIALDPYHYFRHGWNIFDSVVAIVSLTEAITDKWVFLRSFRVL
RVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVLFIFSVVGMQLFGHKFCSVRNLKF
CNASKKSCYRRWHMGDFYHSFLVVFRILCGEWIETMWECMQEVSIPLCVLVFVLIMVIGK
LVVLNLFIALLLNSFSNEERNGNLGEAKKTKVQLALDRFRRAFYFVIHTLLNFCRKRFKR
QKLPKQKETTGGSAADSRDTIPQVTEMKGRSEPQLELEALASAWKTSPEEIGLAPLAKEE
DDCGYADRDDELPITSVDAGRQGCDLHQEMQRPLSPGVPSVEIDVFSEDVSVATQTLRKK
SDAASVLSECSTIDLQGPVRNLYNLVPSQKQPERCLPKGLSYYFLCCKRDKRKSPWVVWW
NLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDSNLHKSPHIQKLLNCTDNIFTSIFVL
EMALKWVAFGFMKYFTNAWCWLDFIIVVVSVVSFMNNTGLKAFRTLRALRPLRALARFEG
MKVVVNALIGAIPAIVNVLLVCLIFWLIFCILGVNFFSGKFGNNTKIFKDDKCPGENHTR
QPLNVNFDHVGMAYLALLQVATYKGWLDIMYAAVDSTDTEEQFEANPYMYLYFVVFIIFG
SFFTLNLFIGVIIDNFNQQQKKISGQDIFMTEEQKKYYNAMKKLGTKKPLKPIPRPLNKC
QGLVFDLVTHQLFDVFVMSLIALNMLCMMVETRHQSDYTTAVLEYLNTAFVIIFTVECLI
KIFALRQYYFTNGWNLFDCVVVVLSIVSALITLAHKKTILFPPTLLRIIRLARIGRILRL
VRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAILGMNCFSEMEKKGEIDDILNFDT
FGGSMLCLFQITTSAGWDSLLNPMLGLNSSGRPYLSAIAITYFVSYIIISFLIVVNMYIA
VILENFNVATEESEEPLGEDDFEIFYEVWEKFDPKATQFIHYSALSDFADALPEPLRVAK
PNKFQFLVMDLPMVSLDRLHCMDILFAFTTRVLGESSGLDTMKAMMEEKFMEANPFKKLY
EPIVTTTKRKAEEKGAAVIQKAFRKYMMKTTKCAGESRPPSPQMLSNGDLPGSEVVKRKV
HYD
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtcccaaggctcaagatggatgacaggttctactccgtgatcttcccagat
gagcggaatttccaccccttcacctcagactccctggctgcaatagagaagcagatcgcc
atccaaaaagagaaaaagaagtccaaagacaagacagtgtttgaacccctgtctcgacct
cagctcgacctgaaggcctccaggaagttacccaaactctatggcaacattccccctgac
atggtagcaaagcccctggaagacttggacccattctacagaaatcataagacatttatg
gtgctgaacaagaaaagaacaatctaccgtttcagtgccaagcgcgccttgttcgttttt
gggcctttcaatcccatcagaagtttagccattcgaatcttggtgcactcattgttcagc
atgttcatcatctgcactgttgtggtcaactgtctgttcatggctatgactagtgctaag
gacaacaacagcacaaagaccgacttccctgaatataccttcactgcaatttatattctg
gaagctctgataaaaatatgtgcaagaggctttatcctggatgaattttctttccttcga
gatccatggaactggctcgactccattgtcattggaaccgcgattgcagatttagttcca
ggttcccaaatcaaactattgtctctgcgtacctttcgagtatttagagctctgaaagca
atttcagtagtttccggtctgaaggtcatcgtgggggccttactgcgctccgtgaagaag
cttgttgacgtgatggtcctcaccctcttctgcctctgcatcttcgccctggtaggtcag
cagcttttccagggcgttctgagccagaaatgtgtcaaggaaggctgtaacaggactcat
gagacaaatgaatcttgctttgtaacagaagataactccctcagacccaaaatgtgtggc
acttggcaagtcgacaggtgtccctcaaattctgaatgcttaccaactggtgttaatcct
gacaataattatacaaactttgataactttggttggtcttttcttgccatgttccggctt
atgactcaagactcctgggagaagctttatcaacagaccttgcgtactgctgggcccttc
tcagtcttcttttttgtggtggtcatcttcttgggctccttctacttgattaacttaacc
ctggcggtcgtcaccatggcttatgaggagcagaacaggaatgtagctgcagagacagag
gccaaagaaaagatgtttcaggaagcccagaagctgatacaggaggagaaggaggctctg
gttgccatgggaattgaccgaagttcactgacttccctccaagcatcatctttttctcca
aagaagaaaaagttttttggtacaactaaaagaaaatctttctttttaagaggatctaag
aaagacaaagctccaggatcagattctgaagaagagtcctcaaaaaatccacccctcctg
gaacaaaccaagcggctatctcagaatcttccagtagacatctttgatgaccacggagac
cctttccaaaggcagagggcactgagtgctgtcagcatcatcaccatcaccatgcaggag
aactatgttagccccaagtggctgcgcattaagaaggccctgagaattgtgatgacggac
ccctttactgagttggctgtcaccatctgtcattttcaagaatggttcactttaagtctt
gttcccatggaagatatttttcttgatggaggaactgccgcattgtcccatcaacccttt
aactaccaagaagccgattttgccttactttcaacagaatggaaagtgatgctccttttc
cgttctgccgttgtgacatccgagagcttggtgcacagtagcactggcctgggtactgtg
gagaggaccaggacagggaaggcagagtgcgctgttgttacaacagtgttcctagcgcag
ggacttgagattgttttcactggcattttcatcgcagaaatgtgcctaaaaatcattgcg
ctcgacccctaccactactttcgccacggctggaacattttcgacagcgttgttgctatt
gtgagccttacagaagccatcactgacaagtgggtatttctgcgttccttcagagtgctg
agggtcttcaagttagccaagtcctggccaaccttaaacaccctgattaagataattggc
cactctgttggagcccttggaaacttgactgtggtgctagccatcgtgctctttattttc
tcagtggttggcatgcagctttttggccataaattctgctccgtacggaatctgaagttt
tgtaacgctagtaagaagtcctgctaccgtcgctggcacatgggagatttctaccattcc
ttcctggtggtgttccgcattctgtgtggggagtggatcgaaaccatgtgggaatgcatg
caagaagttagcatacctctgtgtgttctcgtcttcgtgttgattatggtgataggaaaa
cttgtggtgctcaacctcttcattgctttactgctcaattccttcagcaacgaggagaga
aatggaaacctaggagaggccaaaaaaaccaaagtccagttagcgctggatcgctttcgc
cgggctttttattttgtgattcatactcttctgaatttctgccgcaagcggttcaagcga
caaaagttaccaaagcaaaaagagacgacaggaggctcagctgcagacagcagagacacc
attccccaggtcacagagatgaaagggcggtcagagccccagctggagttagaggcactc
gcctctgcatggaagacctcgcctgaggagattggtctggccccgcttgcaaaggaagag
gacgattgtgggtatgctgatagagatgatgaattgcccatcacatcagttgatgctgga
agacagggctgtgatcttcatcaggaaatgcagaggcccctcagcccaggagttccaagt
gtggaaattgatgtgttctctgaagatgtttctgtggccacacagactctccggaagaag
tctgatgcagccagtgtgctttcagaatgcagcactattgatctgcagggtcctgttaga
aatttgtataatttggttccctcccaaaagcaaccagaaagatgtttgcccaaaggcctg
agttactactttctatgctgtaaaagagacaagagaaagtcaccctgggtcgtgtggtgg
aacctgcggaaaacctgctaccaaatagtcaagcacagttggtttgagagctttattatc
tttgtgattctgctgagcagtggggcactgatatttgaagacagtaatcttcataaatct
ccccacatccaaaagttactaaactgtactgacaatattttcacgtcgatttttgttctg
gaaatggctctgaaatgggtagcctttggatttatgaagtatttcaccaatgcgtggtgc
tggcttgatttcatcattgtggttgtctctgtggtcagttttatgaataatacaggcttg
aaagccttccggactctgcgggcactgaggcctcttcgagccctggctcgatttgaagga
atgaaggtggtggtgaacgctctcataggcgccatacctgccatcgtgaatgttctgctt
gtctgtctcattttctggctcatattttgcattctgggagtaaacttcttttctggaaag
tttggaaataataccaaaattttcaaagatgacaaatgtcctggagaaaatcacaccagg
caacccctgaatgtcaactttgaccatgtgggcatggcttacctcgctctgctgcaagtg
gcaacatataagggctggctggacattatgtatgcagctgttgattccacagacacagaa
gagcaattcgaggcaaatccatacatgtacctttacttcgtagtttttatcatctttggc
tcattctttacgttgaatctcttcattggtgttattattgacaacttcaatcaacagcag
aaaaagataagtggccaagacatttttatgacagaagaacagaagaaatactataatgca
atgaaaaaattaggaactaaaaagcctctgaaaccaattccaaggcctctgaacaaatgt
caaggtcttgtgttcgacctggtcacacaccagctttttgatgttttcgtcatgagtctc
attgccctgaacatgctttgcatgatggttgagacacgacaccagtcggattacacgact
gcggtgcttgaatatctcaacacggcctttgtgatcatctttacagtagagtgtctcatc
aaaatctttgctttgaggcagtattacttcaccaatggctggaatttatttgactgtgtg
gtcgtggttctttctattgttagtgcactgattaccttagcgcacaagaagaccattctt
ttccctccaacactcctcagaattatccgcttggctcgaattggccgaatcctgagactt
gttcgggcggcgcgaggaatcaggactctcctttttgctctaatgatgtcccttccctcg
ctgttcaacattggtcttctactctttttggttatgtttatttatgccattttgggtatg
aactgtttttctgaaatggagaaaaaaggtgaaatcgatgacatattgaacttcgatact
ttcggtggcagcatgctctgtctcttccagataaccacatccgcaggctgggattctctc
cttaaccccatgctgggacttaactcctcagggagaccttacctctctgccatagccata
acctactttgtcagttacatcatcatctcctttctcatcgttgtcaacatgtatattgct
gtaattctagagaacttcaatgtagccacggaagaaagtgaagagcctttgggtgaagat
gactttgaaatattctatgaagtctgggagaagtttgaccccaaagcaacacagtttatc
cattattctgccctttctgactttgccgatgccttgcctgagccattgcgtgtggcaaaa
ccaaataaattccagtttctggtaatggacttgcctatggtgagtttggatcgcctgcac
tgcatggatatcctctttgctttcaccaccagggtcctcggagagtccagtggcctggac
actatgaaagcaatgatggaggagaagttcatggaagccaatcctttcaagaagttatat
gaacccatagtcaccaccaccaagagaaaggcagaggaaaagggtgctgctgttattcaa
aaggcctttcgaaagtacatgatgaagacgaccaaatgtgctggggaaagcaggccgcct
tcacctcagatgctttccaatggagacctgccgggctccgaggtggtcaagcgcaaggtt
cattatgactga
DBGET
integrated database retrieval system
