KEGG   Crocodylus porosus (Australian saltwater crocodile): 109312299
Entry
109312299         CDS       T07440                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03020  RNA polymerase
cpoo03420  Nucleotide excision repair
cpoo04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109312299 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109312299 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109312299 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoo03021]
    109312299 (POLR2E)
   03400 DNA repair and recombination proteins [BR:cpoo03400]
    109312299 (POLR2E)
Transcription machinery [BR:cpoo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109312299 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     109312299 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     109312299 (POLR2E)
DNA repair and recombination proteins [BR:cpoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109312299 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 109312299
NCBI-ProteinID: XP_019393803
Ensembl: ENSCPRG00005015388
LinkDB
Position
Unknown
AA seq 218 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKGQYGDKPSEGRPRRADLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKLYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHEIALLLYLQLVPEHVVMTKEEVTELLARYKLRENQLPR
IQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 657 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccgcttgtggaagatccgcaagaccatcatgcagctc
tgccacgaccgtggctacctggtgacccaggacgagttggaccagacgctggacgagttc
aaagggcagtatggcgacaagcccagcgaggggaggccgaggcgcgctgacctgacggtg
ctggtggcgcacaacgacgatcccacggatcagatgttcgtcttcttccccgaggagccc
aaggtcgggataaagaccatcaagttgtactgccagaggatgcaggaagagaacatcacc
agagccctgatcgtggtgcagcagggcatgacgccgtccgcaaagcagtccctggtagac
atggcccccaagtacatcttggagcagttcctccagcaagagctgctgattaacatcact
gaacatgagattgccctgcttctgtacttgcagctagttccagagcatgtggtcatgaca
aaggaagaagtcactgagctgctagccagatataagctgagagagaaccagctcccaagg
atacaggctggagatcctgtggccagatactttgggataaagcgagggcaggtggtcaag
atcatacggcctagtgagacagcaggtcgatacatcacctaccgactggtgcagtag

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