Crocodylus porosus (Australian saltwater crocodile): 109315938
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Entry
109315938 CDS
T07440
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03020
RNA polymerase
cpoo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109315938 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109315938 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109315938 (POLR3B)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109315938 (POLR3B)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109315938 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109315938
NCBI-ProteinID:
XP_019399445
Ensembl:
ENSCPRG00005018476
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MDELAAELGTLSPEQAAAPVNTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVISDADPMWYLKYLNIYVGTPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGSKLPYTFSDRSQWGKKFKAILRLEQYFGSLIKLNNIGGSTSFFFLF
IGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMAVKQGRFY
LRHNTLSEDIPIAIIFKAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQMQAL
KYIGNKVRRQRMWGGPKKTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILA
QGENKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQVIPKQRAAQFDVVKH
MRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKV
SGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNL
LCGEELSYPNVFLVFLNGNILGVIRDHQKLVNTFRLMRRAGYINEFVSISTNRSDRCVYI
SSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRSFEDFLHEGLVEYLDVNEENDCNIAL
YEHTVNKETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRI
DTLMYLLAYPQRPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRG
FGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQ
VLVNKSMPTVTQTPLEGSSVPQQPQYKDVPVTYKGATDSYIEKVMISSNAEDAFLIKMLL
RQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIE
LLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFG
PVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLL
ERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPR
LKLAKYNE
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctggcggctgagttggggacgctgagcccggagcaagcggcggctcccgtg
aataccgtggaggaaaaatggcgactacttccagcatttctaaaggtgaaaggacttgtg
aagcagcacatagactcattcaactacttcatcaatgtagagataaagaaaatcatgaaa
gccaatgagaaagttataagtgatgctgaccccatgtggtacttaaagtatctcaatatc
tatgtgggtaccccagatgttgaagaaagctttaatgtaacacggcctgtgtctcctcat
gagtgtcgcctgagagatatgacctactctgccccaataacagtggacattgaatacaca
agaggcagtcagaggattattcgcaatgcattacccattggcagtaaattgccctacact
ttttcagatcgttctcaatggggaaaaaaatttaaagccattttaaggttggaacaatat
tttggaagcctgataaagcttaacaatattggaggaagtacatcctttttttttctgttt
ataggtggctacttcattgttaagggtgtagagaaagtcattctcattcaagagcagttg
tccaaaaacaggatcattgtggaagctgatagaaaagggacagttggagcctctgttacc
agttctactcatgagaagaaaagcagaacaaatatggctgtgaaacaaggaagattttat
ctgaggcataacaccctatcagaagatattcccattgctatcatatttaaggccatgggt
gttgaaagtgaccaagagattgtacagatgattggtacagaggaacacgtgatggctgca
tttgctcctagtttggaagaatgccaaaaagctcagatttttacacagatgcaggcctta
aagtacataggaaacaaggtacgaaggcaaaggatgtggggaggcccaaagaaaacaaag
atggaagaagctcgtgagctgttagcatcaactatcctgactcatgttcctgtgaaagaa
ttcaatttccgtgccaagtgcatttacacagctgtgatggtccgcagggtgatcctagcc
caaggagaaaacaaagtagacgacagagactattatggaaacaagagattggagttggca
ggacagctactttccctcctatttgaagatttgttcaaaaaatttaattctgaactgaaa
aaaattgctgaccaggtgatacccaagcagagagcagcccagtttgatgtagtgaagcat
atgcgtcaagatcagatcaccaatggcatggtaaatgccatctcctcaggaaattggtca
ctgaaaagattcaaaatggatcgccaaggtgtgacacaagtgttgtcccgcttgtcttat
atatctgctttgggaatgatgactagaatctcttctcagtttgagaagacaagaaaagtg
agcggtcctcgatctctgcagccatctcagtggggtatgctttgcccatcagacactcct
gaaggagaggcttgtggtttggttaaaaacctagctctgatgactcacattaccactgat
atggaagatggccccattatcaaattggctggtaatcttggagtagaagatgtaaactta
ctatgcggagaagaactttcatatccaaatgtgttccttgtttttcttaatggtaacatc
cttggtgtcattcgagatcatcaaaagctagtcaacacatttcggctaatgcggcgcgca
ggttatatcaatgaatttgtttcaatctctacaaatcgctctgacagatgcgtctacatt
tcttctgatggaggaagattgtgcagaccttatattattgtaaagaagcaaaagccagca
gttacaaacaaacacatggaagaacttgctcagggatacaggagttttgaagatttttta
catgaaggcctagttgaatacttggacgtgaatgaggaaaatgactgcaacattgcactg
tacgagcatacagttaacaaagagacgacacatttggagattgaacctttcacacttctt
ggtgtttgtgctgggcttattccatatcctcaccataaccagtccccaagaaacacttac
cagtgtgctatggggaagcaagcaatgggtaccattggctacaatcagcggaacagaatt
gatactcttatgtatttgctagcatatccacaaaggccaatggttaaaacaaaaaccatt
gaactgatagagtttgagaaactgccagcaggacagaatgctacagttgctgtaatgagc
tacagtggttatgatattgaagatgctctcgtcttaaacaaggcctccttggacagagga
tttggaagatgtcttgtatacaagaatgctaagtgtactctgaagcgctacacaaatcag
acattcgataaagtgatgggtccaatgttggatgcagctacacgtaaaccaatttggcgt
catgaaattttagatgctgatggaatctgctctccaggtgaaaaagtagaaaataaacaa
gtgctcgtaaataaatctatgccaactgtgacccagactcctctggaaggaagtagtgtg
cctcagcaaccgcagtataaagatgtgccagtaacctacaagggtgcaactgattcgtat
attgaaaaagtaatgatctcctccaacgcagaggatgcttttttgatcaaaatgttgtta
agacagactagacgtccagaaattggagataaatttagtagtcgtcatggacaaaaaggg
gtgtgtgggctgattgttcctcaggaagacatgccattttgtgatacaggaatttgtcca
gatatcataatgaatcctcatggcttcccatcacgtatgacggtgggaaaattaattgaa
ctgttggctggaaaggctggcgtcctagatggcagatttcactatggaacagcttttgga
ggcagtaaagttaaggatgtatgtgaagatcttattcgccatggttataactacctaggg
aaggactatgtaacatctggtatcactggagaaccattggaagcctatatctattttggt
cctgtatattatcagaaactaaagcacatggtgttggataagatgcatgccagagctcga
ggacccagagctgtccttaccaggcagcccactgaaggtcgatcccgagatggaggtttg
cgtcttggagaaatggaacgagattgcttgataggttatggagccagcatgcttttgttg
gagagactgatgatttcaagtgatgcctttgaagtagatgtctgtgggcagtgtggcttg
ctgggatactctggctggtgccattactgcaagtcctcatgccacgtgtcatccctgcgc
ataccatacgcctgtaaattgttattccaagagcttcaatctatgaacattatacccagg
ctaaaattggccaaatacaatgaatga
DBGET
integrated database retrieval system
