Crocodylus porosus (Australian saltwater crocodile): 109316029
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Entry
109316029 CDS
T07440
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpoo03016
]
109316029 (CDKAL1)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109316029 (CDKAL1)
Transfer RNA biogenesis [BR:
cpoo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109316029 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
109316029
NCBI-ProteinID:
XP_019399538
Ensembl:
ENSCPRG00005003608
UniProt:
A0A7M4E681
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MPAACDSLLEDIEDIVSAEDLKPRDRQFVRKSVVPKVRKRNSQKNVQADDDPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENSTEADLWLLNSCTVKSPAEDHFRNS
IKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDHVAQVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNSCTYCKTKHARGDLASYPVEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEEYRFPSLFINQFYPRPGTPAAKMHQLPALVKKQRTKDLSQ
LFHSYRPYDHKVGERQRVLVTEESFDSKFYVAHNRFYEQVLVPKDPGFVGKMVEVDIYEA
GKHFMKGQPVSDAKVYTPSLTKPFAKGEVSGVTEELRHALKNGTNLKTCPSVGIQEKTSL
CCRMVMQIPWQQRGRGLKILSMSLALLAVLVTFYYGGV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcgctgcttgaagacattgaagatattgtgtcagcagaagat
ctgaaaccacgtgaccgacagtttgtaagaaaaagtgttgttcctaaagtgagaaaacgc
aactcgcaaaagaatgttcaggcagatgatgatcccccaagtgacagcattattcctggt
gtacagaaaatctggatacgtacgtggggttgctctcataacaattcagatggagaatat
atggctggacagttggctgcttacggatacaaaattacagagaactccacagaagcagac
ttatggctgctgaacagttgcacagtaaaaagcccagctgaagaccacttcagaaactca
attaagaaagcccaagaagaaaacaagaaagtggttttagctggatgtgtcccacaagcc
caacctcgtcaagactacctaaaaggcctaagcatcataggggttcaacaaatagatcat
gtagcacaagttgtggaggaaactattaaaggtcattctgtgagactcttgggtcagaaa
aaggataatggaaaacggttggggggagcgcgattggatttgccaaagattaggaagaac
ccgctgatagaaatcatttccatcaatacaggatgtctaaattcatgtacatattgtaaa
acgaagcatgcccgaggagacctagcaagttatccagttgaagagctagtggacagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggtagagacattggcacagatctccctacacttctgtggaagctggttgaggctatc
cctgagggagctatgttgagacttggcatgacaaaccccccctatattttggagcatctg
gaggaaatggcaaagattctcaatcatccaagagtatatgctttcctccacataccagtt
caatctgcttctgacagcgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacgggtagtggacttccttaaagaaaaagtacctggaataacaattgctacagacatc
atctgtggtttccctggggagactgatgaagattttcaagaaacaatgaaacttgtagaa
gagtacaggtttccaagcctctttattaatcagttttacccacgaccaggaacccctgct
gcaaaaatgcatcaacttccagccttagtgaaaaagcaaagaacaaaggatctatcccag
ctgtttcattcataccgtccttatgatcacaaggttggtgagaggcagagagttctggta
acagaagaatcttttgattccaagttttatgttgctcacaatcgattctatgagcaggtt
cttgtgccaaaggatcctggatttgtaggtaaaatggtagaagtggacatttatgaagca
ggaaaacattttatgaaaggacagccagtgtcagatgccaaagtgtataccccatccctc
accaaaccgttcgcaaaaggagaggtttctggtgtaacagaggagcttagacatgcactg
aagaatggcacaaatttgaaaacatgcccttctgttgggattcaagaaaaaacatcattg
tgctgcaggatggtgatgcaaattccatggcaacaaagaggacgtggactaaagatactg
tctatgagcctggctttactggcagtccttgttacgttttactatggaggtgtataa
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