Crocodylus porosus (Australian saltwater crocodile): 109322137
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Entry
109322137 CDS
T07440
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010
MAPK signaling pathway
cpoo04210
Apoptosis
cpoo04218
Cellular senescence
cpoo04620
Toll-like receptor signaling pathway
cpoo04621
NOD-like receptor signaling pathway
cpoo04622
RIG-I-like receptor signaling pathway
cpoo04623
Cytosolic DNA-sensing pathway
cpoo04625
C-type lectin receptor signaling pathway
cpoo04920
Adipocytokine signaling pathway
cpoo05132
Salmonella infection
cpoo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109322137 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109322137 (NFKB1)
04218 Cellular senescence
109322137 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109322137 (NFKB1)
04621 NOD-like receptor signaling pathway
109322137 (NFKB1)
04622 RIG-I-like receptor signaling pathway
109322137 (NFKB1)
04623 Cytosolic DNA-sensing pathway
109322137 (NFKB1)
04625 C-type lectin receptor signaling pathway
109322137 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
109322137 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109322137 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
109322137 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109322137 (NFKB1)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109322137 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_5
Ank_3
Death
Motif
Other DBs
NCBI-GeneID:
109322137
NCBI-ProteinID:
XP_019408575
Ensembl:
ENSCPRG00005012009
UniProt:
A0A7M4F0G3
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MAEDPYIMGVSDPQMFTVDQFMGMNAIFNNSGYITSDIPLRAADGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVRICNYVGPAKVIVQLVTNGKSVHLHAHSLVGK
YCEDGVCTVSAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVNSELN
YLQVEGCGERQLSDREKEVIRQAALQQTKEMDLSVVRLMFTAFLPDSNGCFTRRLDPVIS
DPIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEVKDK
EEVQRKRQKLMPNFSDSYGGGSGAGGGGGGMYGGGGGGAGSGFGYPPYGYTAFGGMHFHP
GTTKSNAGMKHGLSSDEHEKHRESCNKHNDEQNVKHGAKKELSGRDDSRLCSNKEEEDAT
LSRTAQIDEANSRLQDGLFLEKAMQLAKRHANALFDYAITGDVKMLLAVQRHLTAVQDDN
GDNVLHLAIIHLHAELVRNLLEVMQDLNSDDIINMRNDLYQTPLHLAVITKQADVVEDLL
KAGADVSSLDRHGNSVLHLAAQEGDDKILDILLKHKKTSLMINLSEGEGLNAIHMAVLAN
SVSCLRLLIAAGADINAQEQKSGRTALHLAVEQENISLAGCLLLEGDAYVDSTTYDGTTP
LHIAAGRGSTKLTALLKAAGADPHVENFEPLFDPEDVKGNDDEDEGIVPGTTPLDMATSW
EVYDILNGKPYDSNVASDDLLAPGDVKELNEDSKMQLYKLLEVPDPDKNWSTLAQKLGLG
ILNNAFRLSPTPSKTLLDNYEVSGGTIKELVDALKQMGYTEAIEIIQKARSVPLTECSQE
NFTSKAPPLSPFVPSTKQQTGELYDIKFQDTESMCDSGVETSFRKLSFTCSESLNSKSSI
TLSKMALGYGQEHSIQGKI
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatccctatatcatgggagtgtctgatcctcaaatgtttacagtggatcaa
ttcatgggaatgaatgcaatatttaataattcaggttacattacttcagacataccacta
cgagcagcagatggaccatacttacaaatcatagaacagcctaaacagaggggatttcgt
ttccgatatgtatgtgaaggcccatcacatggtggacttcctggtgcttctagtgaaaag
aacaaaaaatcataccctcaagtcaggatctgcaattatgttgggcctgcaaaagtaatc
gttcagttagtcaccaatgggaagtctgtccacttgcatgcacacagtttggtgggtaaa
tactgtgaagatggagtatgtacagttagtgcaggaccaaaggatatggtggtagggttt
gcaaaccttggaatacttcatgtcaccaagaagaaagtatttgaaactctagaaacacgc
atgatagatgcctgtaaaaaaggatacaatcctggactcttagtgaattctgaacttaat
tatctccaagtagaaggatgtggagaaagacaattatcagatcgggaaaaagaagtcatt
cgccaggcagcattgcagcagacaaaagagatggatctcagcgtggtgcgccttatgttc
acagccttcctccctgacagcaatggctgcttcacaagaagacttgatcctgtcatatca
gatcccatatatgacagcaaagcccccaatgcatccaatttaaagattgtaagaatggac
agaacagcaggatgtgtgacaggaggagaagagatttaccttctctgtgataaggttcaa
aaagatgacattcaaattcgtttttatgaggaagatgaaaatggtggaatgtgggaaggt
tttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaaccccc
aagtacagagatgtcaatatcacaaaaccagcatctgtatttgttcaactgcggcggaaa
tctgatctggaaacaagtgaaccaaagccttttctgtactatccagaagtcaaagacaaa
gaagaagtgcaaaggaagcgacagaagctgatgcctaacttttctgacagctatggtgga
ggcagtggtgcaggaggtggcgggggtggaatgtatggcggtggaggaggtggtgctggc
tcagggtttggttaccctccatacgggtatactgctttcggaggaatgcatttccaccct
ggtacaacaaaatcgaatgctggaatgaaacatgggctttcaagtgatgaacatgaaaaa
cacagggaaagctgcaataagcacaatgacgagcagaatgtgaagcatggtgcaaaaaag
gagctctcaggcagggatgactcccgactctgcagtaataaagaggaggaggatgctact
ttgtcacgtacagctcaaatagatgaagccaactctaggttacaagatggactgttcctg
gagaaggccatgcagctcgctaaacgtcatgccaatgctctttttgactatgccataact
ggagatgtgaagatgttattagctgttcaacgtcatctgactgctgtccaagatgataat
ggtgacaatgtacttcatttagcaattatccaccttcatgccgagctggtgcgaaacctc
ttagaagtgatgcaggatttgaattctgatgacatcatcaatatgagaaatgatctttat
cagacccccttgcacttggcagttatcacaaagcaggcggatgtggtggaagatctgctg
aaggctggggctgatgtcagttctctggatcgacatgggaactccgtcttgcatttagca
gcccaggagggagatgacaaaattttggacatactccttaagcacaagaaaacctctctg
atgatcaacctttcagagggggaaggtctcaatgcaattcacatggcagtgctagcaaat
agcgtgtcttgcctcaggctgctgatcgctgctggagctgacatcaatgctcaggaacaa
aaatctggacgaactgcattgcatctggctgttgaacaagagaacatctctttggcaggc
tgccttctgcttgagggtgacgcatatgttgacagcactacatatgatggaaccactcca
ctccatatagcagctggaaggggctccacaaaactgacagctcttctcaaagcagcaggt
gcagatcctcatgttgagaactttgaaccattgtttgatccagaggatgtgaaaggcaat
gatgatgaagatgaaggaattgtacctggaacgacacctttggacatggccaccagctgg
gaggtgtatgacatattaaatggcaaaccctatgactcaaacgtggcttctgatgatcta
ctagcaccaggagatgtgaaagagctgaatgaagactccaagatgcagctctacaagtta
ttagaagtacctgatccagacaaaaactggtctaccctggcacaaaagctgggccttgga
atactcaataatgctttcagattgagtcccacaccatcaaaaactctgctggataactat
gaggtttctggtggtacaataaaggagttagtcgatgccttgaagcaaatgggttacaca
gaagcaattgaaatcattcagaaagcgcgatccgtcccactaactgagtgcagccaggag
aactttacctccaaggctccaccactatcaccatttgttccatccactaaacaacaaaca
ggtgaactttatgatatcaaattccaagacactgaaagcatgtgtgatagtggagtggag
acttccttccgcaaacttagctttacttgttccgagtccctgaacagcaagtcttcaata
acacttagcaaaatggccttgggctacggccaagaacactcaatacaaggcaaaatctaa
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integrated database retrieval system
