Collimonas pratensis: CPter91_0254
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Entry
CPter91_0254 CDS
T04306
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
cpra
Collimonas pratensis
Pathway
cpra00053
Ascorbate and aldarate metabolism
cpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
CPter91_0254 (garD)
Enzymes [BR:
cpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
CPter91_0254 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Flg_new_2
Motif
Other DBs
NCBI-ProteinID:
AMP02653
UniProt:
A0A127PXY6
LinkDB
All DBs
Position
263227..264774
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AA seq
515 aa
AA seq
DB search
MPLYIRMQDEDNVAIVANDGGLPAGTIFPCGLVLRDKVPQGHKLALRDLAEGEAIIRYGV
AIGYAQRAIPQGSWIEESLVRMPPARELSNLPIATRVPVAAAPLEGYTFEGYRNADGTVG
TRNILAISTTVQCVSGVVEHAVKRIKAELLSKYPHVDDVIGLEHTYGCGVAIDAPGAEIP
IRTLRNISMNPNFGGQAMVVSLGCEKLQPGRLFPQGTIPIQNTGGKEDGLRVVCLQDAEH
IGFEAMIASIMATAEEQLSELNLRRRETCPASELTVGVQCGGSDAFSGVTANPAVGYASD
LLVRAGATVMFSETTEVRDGIDQLTARAANPEVAAAMIREMAWYDDYLTRGGVDRSANTT
PGNKKGGLANIVEKAMGSIVKSGSRPISGVLSPGDKVRQKGLIYAATPASDFVCGTLQLA
AGMNLHVFTTGRGTPYGLAAVPVIKVATRNDLARRWHDLMDINAGRIASGEATIEEVGWE
LFRLMLDVASGRKQTWAEHHKLHNALTLFNPAPIT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgcctttatatatccgcatgcaggacgaggacaacgtcgccatcgtggcgaatgacggc
ggcctgcctgccgggaccatatttccttgcggcctggtgttgcgcgataaggtgccacaa
ggccacaagctggcattgcgcgacctggccgaaggcgaagccatcatccgttacggtgtc
gctatcggctatgcgcaacgcgccattccacaaggcagctggatagaagagtcgctggtg
cgcatgccgcccgcgcgcgaattgagcaacctgccgatcgccacccgggtgccggttgca
gctgcgccgctggaaggctacaccttcgaaggctatcgcaatgccgacggtacggtcggc
acccgcaacatcctggcgatcagcaccacggtgcaatgcgtgtcgggcgtggtggagcat
gcggtcaaacgcatcaaggccgagctgctgtccaagtatccacatgtggatgacgttatc
ggccttgaacacacttacggctgtggcgtggcgatcgatgcgccgggcgcggaaattccg
atccgcaccctacgtaacatcagcatgaatccgaacttcggcggccaggccatggtggtc
agcctgggctgcgaaaagctgcagcctggccgtctgttcccgcaagggacgatcccgatc
cagaacaccggcggcaaggaagacggcttgcgcgtggtctgccttcaggatgcggaacat
atcggcttcgaggctatgatcgcgtccatcatggcgactgcggaagagcaactgagcgaa
ctgaacctgaggcgccgcgaaacctgtccggcttcggagctgacggtgggcgtgcagtgc
ggcggtagcgacgccttctcaggtgttaccgccaatccggcggtgggctacgccagcgac
ctgctggtgcgcgccggcgccaccgtgatgttttccgaaaccaccgaagtgcgcgacggc
atcgaccagctcactgcgcgcgccgccaatccggaggttgccgcggcgatgatccgcgag
atggcctggtacgacgattacctgacccgcggcggcgtcgaccgcagcgccaacaccacg
cccggcaataaaaagggcggccttgcgaacatcgtcgagaaggccatgggttccatcgtc
aagtccggcagccgcccaatttccggcgtgctctcgcccggcgacaaggtccggcaaaag
ggtttgatctacgccgccacgccggccagcgatttcgtctgcggcacactgcagctggct
gccggcatgaacctgcacgtgttcaccaccgggcgcggcacgccctacggcttggctgcg
gtgccggtgatcaaggtggccacgcgcaatgacctggcgcggcgctggcacgacctgatg
gatatcaacgccggccgcatcgccagcggcgaagccaccatcgaggaagtcggctgggag
ctgttccgcctgatgctggacgtcgccagcggtcgcaagcagacttgggccgaacatcac
aaattgcataatgccctgaccctgttcaatccggcgccgatcacatga
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